| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is dut [H]
Identifier: 238028416
GI number: 238028416
Start: 3264038
End: 3264484
Strand: Direct
Name: dut [H]
Synonym: bglu_1g28800
Alternate gene names: 238028416
Gene position: 3264038-3264484 (Clockwise)
Preceding gene: 238028415
Following gene: 238028419
Centisome position: 83.55
GC content: 68.9
Gene sequence:
>447_bases ATGAAACTCGACCTCAAGATCCTCGACGCGCGCATGCGCGACTACCTGCCGAACTACGCGACGCCGGGCAGCGCGGGCCT CGACCTGCGCGCCTGCCTCGACGCCGCCGTCACGCTGCAGCCGGGCGAAACGACGCTGGTGCCGACCGGGCTCGCGATCC ACCTCGCCGATGCCCGCTATGCGGCGCTGATCCTGCCGCGCTCGGGCCTCGGCCACAAGCACGGCATCGTGCTCGGCAAC CTCGTCGGCCTGATTGACTCCGATTACCAGGGCCAGCTGATGATCTCGACCTGGAATCGCGGGCAGACCGCGTTCACGCT CGAGCCGTTCGAGCGGCTCGCCCAGCTCGTGATCGTGCCGGTCGTGCAGGCGAGCTTCAACGTCGTCGAAGCGTTCGCAC AGAGCGAGCGCGGTGAAGGCGGCTTCGGCAGCACCGGCCGTGGCTGA
Upstream 100 bases:
>100_bases ACACGCGCCTGATCTGATCCATCCAAGCCGCCGGGCCGCAACGCATGGCGCGGCCCGGTGCATGTTGCAATTTCACGACT CCTGCCAGCAGACCCGCCGC
Downstream 100 bases:
>100_bases CGGCCCAAGGGCGACCAGAGCGCCCGCCGCAGGGACGTCGCGGGGGGCTCGCGGGGGCCGCCGCGATTAGTACGTTTATT CCATTCGAATCACCGGCCGG
Product: Deoxyuridine 5'-triphosphate nucleotidohydrolase Dut
Products: NA
Alternate protein names: dUTPase; dUTP pyrophosphatase [H]
Number of amino acids: Translated: 148; Mature: 148
Protein sequence:
>148_residues MKLDLKILDARMRDYLPNYATPGSAGLDLRACLDAAVTLQPGETTLVPTGLAIHLADARYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTAFTLEPFERLAQLVIVPVVQASFNVVEAFAQSERGEGGFGSTGRG
Sequences:
>Translated_148_residues MKLDLKILDARMRDYLPNYATPGSAGLDLRACLDAAVTLQPGETTLVPTGLAIHLADARYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTAFTLEPFERLAQLVIVPVVQASFNVVEAFAQSERGEGGFGSTGRG >Mature_148_residues MKLDLKILDARMRDYLPNYATPGSAGLDLRACLDAAVTLQPGETTLVPTGLAIHLADARYAALILPRSGLGHKHGIVLGN LVGLIDSDYQGQLMISTWNRGQTAFTLEPFERLAQLVIVPVVQASFNVVEAFAQSERGEGGFGSTGRG
Specific function: This enzyme is involved in nucleotide metabolism:it produces dUMP, the immediate precursor of thymidine nucleotides and it decreases the intracellular concentration of dUTP so that uracil cannot be incorporated into DNA [H]
COG id: COG0756
COG function: function code F; dUTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the dUTPase family [H]
Homologues:
Organism=Homo sapiens, GI70906444, Length=131, Percent_Identity=36.6412213740458, Blast_Score=81, Evalue=3e-16, Organism=Homo sapiens, GI4503423, Length=131, Percent_Identity=36.6412213740458, Blast_Score=80, Evalue=6e-16, Organism=Homo sapiens, GI70906441, Length=145, Percent_Identity=34.4827586206897, Blast_Score=79, Evalue=2e-15, Organism=Escherichia coli, GI1790071, Length=148, Percent_Identity=72.2972972972973, Blast_Score=221, Evalue=1e-59, Organism=Caenorhabditis elegans, GI71988561, Length=145, Percent_Identity=35.1724137931034, Blast_Score=84, Evalue=2e-17, Organism=Saccharomyces cerevisiae, GI6319729, Length=145, Percent_Identity=35.1724137931034, Blast_Score=75, Evalue=6e-15, Organism=Drosophila melanogaster, GI24583610, Length=149, Percent_Identity=31.5436241610738, Blast_Score=72, Evalue=2e-13, Organism=Drosophila melanogaster, GI19921126, Length=149, Percent_Identity=31.5436241610738, Blast_Score=71, Evalue=2e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR008180 - InterPro: IPR008181 [H]
Pfam domain/function: PF00692 dUTPase [H]
EC number: =3.6.1.23 [H]
Molecular weight: Translated: 15806; Mature: 15806
Theoretical pI: Translated: 6.24; Mature: 6.24
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLDLKILDARMRDYLPNYATPGSAGLDLRACLDAAVTLQPGETTLVPTGLAIHLADARY CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCEEEEECCCCEEEECCCEEEEECCCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISTWNRGQTAFTLEPFERLAQLVIVP EEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQASFNVVEAFAQSERGEGGFGSTGRG HHHHHHHHHHHHHHHCCCCCCCCCCCCC >Mature Secondary Structure MKLDLKILDARMRDYLPNYATPGSAGLDLRACLDAAVTLQPGETTLVPTGLAIHLADARY CCCCHHHHHHHHHHHCCCCCCCCCCCCHHHHHHCEEEEECCCCEEEECCCEEEEECCCCE AALILPRSGLGHKHGIVLGNLVGLIDSDYQGQLMISTWNRGQTAFTLEPFERLAQLVIVP EEEEECCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCEEEEECHHHHHHHHHHHH VVQASFNVVEAFAQSERGEGGFGSTGRG HHHHHHHHHHHHHHHCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA