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The map label for this gene is yaaD [H]

Identifier: 238028402

GI number: 238028402

Start: 3248316

End: 3248771

Strand: Reverse

Name: yaaD [H]

Synonym: bglu_1g28660

Alternate gene names: 238028402

Gene position: 3248771-3248316 (Counterclockwise)

Preceding gene: 238028407

Following gene: 238028401

Centisome position: 83.16

GC content: 62.72

Gene sequence:

>456_bases
ATGAGCCTCATCGATATTTCAGAAGTGAAGCCCGGTTCCCACGTCACGCTTCATTACCGGCTCGCGCTCGCCGATGGTGC
GGACATCGTCAATACTTTCACCGACAAGCCGGCTACCCTGCTGCTCGGTGCCGGGCAACTCGCCCCGGCGCTCGAGGCCA
TTCTGCTCGGCCTGAAGTCCGGACACCATTCGACCTTCCAGCTAGCGGCTGGCGAGGCGTTCGGTCCCCGCAATCCGGAG
ATGATCCAGCGCGTCAGCCTGAAGACGCTGCGCGAGAACGGCATGGTGGGCGACGACTTCACGCCCGGCGACCTGATCGA
GTTCAATGCGCCGGACGGCGGCCGCTACGCGGGCGTGCTGAAGGAGGTCGGCGAGACCTCGGCGCTGTTCGATTTCAATC
ACCCGCTTGCGGGGCAGGCCATTACGTTCGAAGTGAAAATCATCGGGATCCTGTAA

Upstream 100 bases:

>100_bases
CGACGGCGGCCGTGGTCCGGCATTCCGCCCCGCGCGCCCAGGTGACTTACAATAGCGGTTTTGCGTTGTGCCGCCCGGCG
GCGGATTGAACGAGTAACTC

Downstream 100 bases:

>100_bases
CCATGAGCTCCACCGATACGCTGTCCGGCCCCACCGTCGCGGCCGATGCCGAAATCCTGCTCGCCCAGCCGCGCGGCTTC
TGCGCCGGCGTCGACCGCGC

Product: FKBP-type peptidyl-prolyl cis-trans isomerase

Products: NA

Alternate protein names: PPIase; Rotamase [H]

Number of amino acids: Translated: 151; Mature: 150

Protein sequence:

>151_residues
MSLIDISEVKPGSHVTLHYRLALADGADIVNTFTDKPATLLLGAGQLAPALEAILLGLKSGHHSTFQLAAGEAFGPRNPE
MIQRVSLKTLRENGMVGDDFTPGDLIEFNAPDGGRYAGVLKEVGETSALFDFNHPLAGQAITFEVKIIGIL

Sequences:

>Translated_151_residues
MSLIDISEVKPGSHVTLHYRLALADGADIVNTFTDKPATLLLGAGQLAPALEAILLGLKSGHHSTFQLAAGEAFGPRNPE
MIQRVSLKTLRENGMVGDDFTPGDLIEFNAPDGGRYAGVLKEVGETSALFDFNHPLAGQAITFEVKIIGIL
>Mature_150_residues
SLIDISEVKPGSHVTLHYRLALADGADIVNTFTDKPATLLLGAGQLAPALEAILLGLKSGHHSTFQLAAGEAFGPRNPEM
IQRVSLKTLRENGMVGDDFTPGDLIEFNAPDGGRYAGVLKEVGETSALFDFNHPLAGQAITFEVKIIGIL

Specific function: PPIases accelerate the folding of proteins [H]

COG id: COG1047

COG function: function code O; FKBP-type peptidyl-prolyl cis-trans isomerases 2

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 PPIase FKBP-type domain [H]

Homologues:

Organism=Escherichia coli, GI1786211, Length=143, Percent_Identity=37.7622377622378, Blast_Score=89, Evalue=1e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001179 [H]

Pfam domain/function: PF00254 FKBP_C [H]

EC number: =5.2.1.8 [H]

Molecular weight: Translated: 16024; Mature: 15892

Theoretical pI: Translated: 4.89; Mature: 4.89

Prosite motif: PS50059 FKBP_PPIASE

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSLIDISEVKPGSHVTLHYRLALADGADIVNTFTDKPATLLLGAGQLAPALEAILLGLKS
CCCCCCCCCCCCCEEEEEEEEEEECCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
GHHSTFQLAAGEAFGPRNPEMIQRVSLKTLRENGMVGDDFTPGDLIEFNAPDGGRYAGVL
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH
KEVGETSALFDFNHPLAGQAITFEVKIIGIL
HHCCCCCEEEECCCCCCCCEEEEEEEEEEEC
>Mature Secondary Structure 
SLIDISEVKPGSHVTLHYRLALADGADIVNTFTDKPATLLLGAGQLAPALEAILLGLKS
CCCCCCCCCCCCEEEEEEEEEEECCCHHHHHCCCCCEEEEEECCCHHHHHHHHHHHHCC
GHHSTFQLAAGEAFGPRNPEMIQRVSLKTLRENGMVGDDFTPGDLIEFNAPDGGRYAGVL
CCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHCCCCCCCCCCCCEEEEECCCCCHHHHHH
KEVGETSALFDFNHPLAGQAITFEVKIIGIL
HHCCCCCEEEECCCCCCCCEEEEEEEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 2121716 [H]