| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238028102
Identifier: 238028102
GI number: 238028102
Start: 2910970
End: 2911521
Strand: Reverse
Name: 238028102
Synonym: bglu_1g25530
Alternate gene names: NA
Gene position: 2911521-2910970 (Counterclockwise)
Preceding gene: 238028103
Following gene: 238028101
Centisome position: 74.53
GC content: 61.59
Gene sequence:
>552_bases ATGTTCGCTTCATCCTTCACCCGTAGCGGGATTGCCGTGGCGGCGGCGCTTGTCGCGATGTCGGCATCGGCGGCGGAGTA TCCGATCGGCAAGCAGCAGATCCAGGGTGGCATGGAAGTCGGCGTCGTGTATCTGCAGCCGATCACGATGGAACCGGAAG GCATGATGCGCAAGGCATCGGATTCCGACATTCATCTCGAGACCGACATTCATGCGGTGAAGAACAACCCGACGGGCTTC GCCGAGGGCGACTGGATGCCGTATCTGCAGGTCGAGTACAAGCTGACCAAGCAGGGTGACGCGAAGTGGAAGGCGGAAGG CAACCTGATGGGCATGGTCGCGAACGACGGCCCGCACTATGGCGACAACGTCAAGCTCGACGGCCCGGGCAAGTACCATC TGTCGATGACGGTGAAGCCGCCGATGCAGACGGGCCACCTGGCCTTCGGCCGCCACGTCGACAAGGAAACGGGCGTGGGC CCGTGGTTCAAGCCGTTTACGCTCGAATACGATTTCCCGTTCGCGGGTATCGGCAAGAAGGGCGGTTACTGA
Upstream 100 bases:
>100_bases TTAACTTTCGTAGTTACCCGCATCGCCAATTGCGTCACGAGCGTTCGTGAGCATTCGCGAGGTGTTTCAGTTCACCAGAC GATAAAAACAAGGAGTTTCA
Downstream 100 bases:
>100_bases TCGCGCTGCGTATCGCGCGTCGCCGTCCGGCACGGCCTGGCGGCGTCGCACGGTGCCGCCCTCAACGAGAAACATAATGA GATTCCCCAGGATTTTCGCC
Product: high-affinity Fe2 transport protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 183; Mature: 183
Protein sequence:
>183_residues MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG PWFKPFTLEYDFPFAGIGKKGGY
Sequences:
>Translated_183_residues MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG PWFKPFTLEYDFPFAGIGKKGGY >Mature_183_residues MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKASDSDIHLETDIHAVKNNPTGF AEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHYGDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVG PWFKPFTLEYDFPFAGIGKKGGY
Specific function: Unknown
COG id: COG3470
COG function: function code P; Uncharacterized protein probably involved in high-affinity Fe2+ transport
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0423 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR018470 [H]
Pfam domain/function: PF10634 Iron_transport [H]
EC number: NA
Molecular weight: Translated: 19904; Mature: 19904
Theoretical pI: Translated: 6.52; Mature: 6.52
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 6.0 %Met (Translated Protein) 6.0 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 6.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKAS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHCCCC DSDIHLETDIHAVKNNPTGFAEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHY CCCEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC GDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVGPWFKPFTLEYDFPFAGIGKK CCCEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GGY CCC >Mature Secondary Structure MFASSFTRSGIAVAAALVAMSASAAEYPIGKQQIQGGMEVGVVYLQPITMEPEGMMRKAS CCCCCCCCCHHHHHHHHHHHCCCCCCCCCCHHHHCCCCEEEEEEEEEEEECCHHHHCCCC DSDIHLETDIHAVKNNPTGFAEGDWMPYLQVEYKLTKQGDAKWKAEGNLMGMVANDGPHY CCCEEEEECEEEECCCCCCCCCCCCCCEEEEEEEEECCCCCEEEECCCEEEEEECCCCCC GDNVKLDGPGKYHLSMTVKPPMQTGHLAFGRHVDKETGVGPWFKPFTLEYDFPFAGIGKK CCCEEECCCCEEEEEEEECCCCCCCCEEECCCCCCCCCCCCCCCCEEEEECCCCCCCCCC GGY CCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 12271122 [H]