Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238028101

Identifier: 238028101

GI number: 238028101

Start: 2910555

End: 2910893

Strand: Reverse

Name: 238028101

Synonym: bglu_1g25520

Alternate gene names: NA

Gene position: 2910893-2910555 (Counterclockwise)

Preceding gene: 238028102

Following gene: 238028100

Centisome position: 74.51

GC content: 64.31

Gene sequence:

>339_bases
ATGAGATTCCCCAGGATTTTCGCCGCCGCGCTCGTCACCTTCGCCGCCGCTGCCAACGTTGCCGCTTATGCGGCCGATCT
GCCGACGTTCAAGCTGGAGATGGCGGACGGCAAGCTCAACCCGGCGCGCATCGAGGTGCCGGCCGGCCAGCGCTTCAAGA
TCGAGGTCCGCAATACCGGCAAGGGTGCGGTCGAGTTCGAGAGCGTCCAACTGCGCAAGGAGAAGGTGCTCGCGCCCGGA
GCCGAATCGTTCGTCGTGATCGCGCCGCAGTCGCCCGGCGAGTACAAGTTCTTCGACGATTTCCATCAGCAGGCGCAGGG
CGTCATCGTCGCAAAGTAG

Upstream 100 bases:

>100_bases
ATCGGCAAGAAGGGCGGTTACTGATCGCGCTGCGTATCGCGCGTCGCCGTCCGGCACGGCCTGGCGGCGTCGCACGGTGC
CGCCCTCAACGAGAAACATA

Downstream 100 bases:

>100_bases
TCCCGATTTATCGTGCGGCCGCGGAGGCCCCGCCGCGGCCGGGGTACACGGAGGTTTCAATGGGTCAAATCATCTTCATC
GTCTGGCGCGAGAGCGTCGA

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Exported Protein

Number of amino acids: Translated: 112; Mature: 112

Protein sequence:

>112_residues
MRFPRIFAAALVTFAAAANVAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEVRNTGKGAVEFESVQLRKEKVLAPG
AESFVVIAPQSPGEYKFFDDFHQQAQGVIVAK

Sequences:

>Translated_112_residues
MRFPRIFAAALVTFAAAANVAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEVRNTGKGAVEFESVQLRKEKVLAPG
AESFVVIAPQSPGEYKFFDDFHQQAQGVIVAK
>Mature_112_residues
MRFPRIFAAALVTFAAAANVAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEVRNTGKGAVEFESVQLRKEKVLAPG
AESFVVIAPQSPGEYKFFDDFHQQAQGVIVAK

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 12183; Mature: 12183

Theoretical pI: Translated: 9.66; Mature: 9.66

Prosite motif: PS00430 TONB_DEPENDENT_REC_1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRFPRIFAAALVTFAAAANVAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEVRNTG
CCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCC
KGAVEFESVQLRKEKVLAPGAESFVVIAPQSPGEYKFFDDFHQQAQGVIVAK
CCEEEEHHEEEEHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEEEC
>Mature Secondary Structure
MRFPRIFAAALVTFAAAANVAAYAADLPTFKLEMADGKLNPARIEVPAGQRFKIEVRNTG
CCCHHHHHHHHHHHHHHHHHHEEECCCCEEEEEECCCCCCCEEEECCCCCEEEEEEECCC
KGAVEFESVQLRKEKVLAPGAESFVVIAPQSPGEYKFFDDFHQQAQGVIVAK
CCEEEEHHEEEEHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHCEEEEEC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA