| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027976
Identifier: 238027976
GI number: 238027976
Start: 2735434
End: 2736324
Strand: Direct
Name: 238027976
Synonym: bglu_1g24230
Alternate gene names: NA
Gene position: 2735434-2736324 (Clockwise)
Preceding gene: 238027975
Following gene: 238027978
Centisome position: 70.02
GC content: 67.23
Gene sequence:
>891_bases ATGGCAACACCAACCATCAACCAGTTTCTCGACAGCCTGGGCGTCCGCCTGGCCGTCCGTCGTCCGTCGTGGGATGCCAC GGACGAAAGCACGGATACCGTCGTGATGAAGCTGTGGTTCAAGGACGTGGAGCCCGGGAGCAACGACCGATCCATCGGCG TCTGGAAACCTCGCCCGCCTGGCGATCGCAGCGATCCGATCGGTCGCGCCGAGCGTCTGCGCAGCATCGCTCACCTCGAA GCCGGCCGTCCCACGTACGCGGTGCTTCGCTACGGGAAGGACCGTGACGATCCGCTGGCGAAGAAGTACGACGGGGTCCA CCTCCGCAAGCTCAAAAGCGTGGACCGCCGCCCCGATGGTCACGTGTTCGTCACGGTCGATCGGTTGGTGACCGTCGAGG ACTACCTGGCCCGACCGTCCGCCGGGTCATCGCTCGCGCAGGACATGGCCGACATCGAGCGGCGCTACGCGAAACCCGAT CAAGCCACCACCCGCCATGCGCTCGTGCAAGCGCGCATGGGACAGGGCCGCTACCGCGCCGGTCTGCTCTCCCTTTGGGG CGGTGCCTGCGCCGTCACCGGATGCTCGGTCGGAACGCTCCTCATCGCCTCCCACGCGATGGCCTGGGCCGACTCGAACG ACGATCAGCGCCTGGACCCGGCCAACGGGCTCCCCCTGATCGCCAACCTGGACCGCCTGTTCGACAACCACCTGATCGCG TTCGACCCGGACACCGGGGACATGCTTGTGTCCGACGTCCTGTCGGCGAAGGACCGCGCGCTCGTGGGCGTGCCCGCCCC GCTGCGCAAGAAACCGACGAAGCGCCAGGCGGTCTACCTCCGTCATCACCTGGACCTGTTCCTTGCTGCCCAGGAGGGCA CGGAGGACTGA
Upstream 100 bases:
>100_bases ACGAAGGGTCCGGTGCCCTCCGGTATCATCGCCAGGCCAGGCCGGACCACCGGCCGGCGATGACCAGGACTAGACCGAGA CCACACCATCGGGGGGCAGC
Downstream 100 bases:
>100_bases ACGCCCCCCCGCCCGTCTGTTAGCCAAACTTCACTTGGTCGGCCATGTCGCCGTACATCTGCTGCTGCCGAAGTGCAGCG ATTTGGATGACCGCCGGGAT
Product: hypothetical protein
Products: NA
Alternate protein names: Type II Restriction HphI; Restriction Endonuclease-Like Protein; Restriction Endonuclease Putative; Restriction -Related Protein; Restiction Endonuclease
Number of amino acids: Translated: 296; Mature: 295
Protein sequence:
>296_residues MATPTINQFLDSLGVRLAVRRPSWDATDESTDTVVMKLWFKDVEPGSNDRSIGVWKPRPPGDRSDPIGRAERLRSIAHLE AGRPTYAVLRYGKDRDDPLAKKYDGVHLRKLKSVDRRPDGHVFVTVDRLVTVEDYLARPSAGSSLAQDMADIERRYAKPD QATTRHALVQARMGQGRYRAGLLSLWGGACAVTGCSVGTLLIASHAMAWADSNDDQRLDPANGLPLIANLDRLFDNHLIA FDPDTGDMLVSDVLSAKDRALVGVPAPLRKKPTKRQAVYLRHHLDLFLAAQEGTED
Sequences:
>Translated_296_residues MATPTINQFLDSLGVRLAVRRPSWDATDESTDTVVMKLWFKDVEPGSNDRSIGVWKPRPPGDRSDPIGRAERLRSIAHLE AGRPTYAVLRYGKDRDDPLAKKYDGVHLRKLKSVDRRPDGHVFVTVDRLVTVEDYLARPSAGSSLAQDMADIERRYAKPD QATTRHALVQARMGQGRYRAGLLSLWGGACAVTGCSVGTLLIASHAMAWADSNDDQRLDPANGLPLIANLDRLFDNHLIA FDPDTGDMLVSDVLSAKDRALVGVPAPLRKKPTKRQAVYLRHHLDLFLAAQEGTED >Mature_295_residues ATPTINQFLDSLGVRLAVRRPSWDATDESTDTVVMKLWFKDVEPGSNDRSIGVWKPRPPGDRSDPIGRAERLRSIAHLEA GRPTYAVLRYGKDRDDPLAKKYDGVHLRKLKSVDRRPDGHVFVTVDRLVTVEDYLARPSAGSSLAQDMADIERRYAKPDQ ATTRHALVQARMGQGRYRAGLLSLWGGACAVTGCSVGTLLIASHAMAWADSNDDQRLDPANGLPLIANLDRLFDNHLIAF DPDTGDMLVSDVLSAKDRALVGVPAPLRKKPTKRQAVYLRHHLDLFLAAQEGTED
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32724; Mature: 32593
Theoretical pI: Translated: 8.66; Mature: 8.66
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 2.0 %Met (Translated Protein) 2.7 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MATPTINQFLDSLGVRLAVRRPSWDATDESTDTVVMKLWFKDVEPGSNDRSIGVWKPRPP CCCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEHHCCCCCCCCCEEEEECCCCC GDRSDPIGRAERLRSIAHLEAGRPTYAVLRYGKDRDDPLAKKYDGVHLRKLKSVDRRPDG CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCCC HVFVTVDRLVTVEDYLARPSAGSSLAQDMADIERRYAKPDQATTRHALVQARMGQGRYRA CEEEEEHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH GLLSLWGGACAVTGCSVGTLLIASHAMAWADSNDDQRLDPANGLPLIANLDRLFDNHLIA HHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE FDPDTGDMLVSDVLSAKDRALVGVPAPLRKKPTKRQAVYLRHHLDLFLAAQEGTED ECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCC >Mature Secondary Structure ATPTINQFLDSLGVRLAVRRPSWDATDESTDTVVMKLWFKDVEPGSNDRSIGVWKPRPP CCCCHHHHHHHCCCEEEEECCCCCCCCCCCCEEEEEEEHHCCCCCCCCCEEEEECCCCC GDRSDPIGRAERLRSIAHLEAGRPTYAVLRYGKDRDDPLAKKYDGVHLRKLKSVDRRPDG CCCCCCCCHHHHHHHHHHHHCCCCCEEEEECCCCCCCCHHHHHCCHHHHHHHHHCCCCCC HVFVTVDRLVTVEDYLARPSAGSSLAQDMADIERRYAKPDQATTRHALVQARMGQGRYRA CEEEEEHHEEEHHHHHCCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHCCCHHHH GLLSLWGGACAVTGCSVGTLLIASHAMAWADSNDDQRLDPANGLPLIANLDRLFDNHLIA HHHHHHCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHCCCEEE FDPDTGDMLVSDVLSAKDRALVGVPAPLRKKPTKRQAVYLRHHLDLFLAAQEGTED ECCCCHHHHHHHHHHCCCCEEEECCCCCCCCCCHHHHHHHHHHHEEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA