Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is 238027975

Identifier: 238027975

GI number: 238027975

Start: 2733627

End: 2735186

Strand: Direct

Name: 238027975

Synonym: bglu_1g24220

Alternate gene names: NA

Gene position: 2733627-2735186 (Clockwise)

Preceding gene: 238027973

Following gene: 238027976

Centisome position: 69.98

GC content: 66.47

Gene sequence:

>1560_bases
ATGGCTGCTTACCAACCGAAGAACGGGGTGAAGTCGACGGGCACCCGCAAGGTGAAGGATTCGGTCGAGCTGTATTACGC
CGACCGTTTGGAAAAGGACGCGAATCTGGCGGTCGGCAGCGGCGAGACGCCGGAGCTGTTCCGCTGGAACGGCGTGTTCT
GGGAAGCCCAGCGTGACGTCGCACTCGAACAAGACGCGCTCCGCCAGCTCCAAAAGCTGGAACCCGCGAAGTACAGCGCG
AGCAAGGCCCGCTCGATGGTCGAGACCGCCATTACGCGTCTGGCCGGCCACAAGCCCCTGCCCGTGCCGCAGAAGTCGAC
CGGCGTGCTCGTGCCGTTGCGGGACGGTCTGCTCGAAGTGCTCCCGTCCGGCGTGGTGAAGGCCCACAAGCCGGCCCCGC
ATTTCGGCGTCACGCACGCCATCAACGCGTCCATCGACTGGACGCGCGTCGGTGCGGAGGGCACGTATGGCCTGCTCCCG
ATGACCCCGGACAGCCGCTTCGGCCGCTTCATCATGCAGGTCCAGCCGAGCCCGGCGATGCGCGACTACCTTGCCGAGTG
CTTCGGGTCGACGCTCTCCACGATGAACGTCCAGAAGGCGATCATTCTCGAAGGTACCGGTGCCAACGGGAAAAGCTTGT
GCCTGCAGATCCTCTCGGCCTTCCACGCCAACCCGGTAGCGTTCGACCTGTCGCGTCTGGACGGGGAGTTCAACACCGAG
CCGCTGGTCCACGCCACGCTGGTCACGGTGTCGGAAGCGCCCCCGCGTAAGCGCCCGATCAACGAGAACCTGTTCAAAGC
GTGGGTCGCCCGTGACCCGGTGTCGGTGAACCGCAAGAACCGCGTGCCCCTGACGGTGAAGCCGCGTGCCTCGTGGGTGC
TGGCCATGAACGAAGCCATGGGCTTCTCGGACATGTCCCACGGGTTCCTGCGTCGCATTGCCAACGTGCCGTTCACGCAG
ACGATCCGCGCCGAGGACCAGATCCCGGACCTCGACCGCCTGATCACGGAGAACCCCGACGAGATGGCGATCGCGCTGGA
TTGGCTGCTGGCCGGCCTTATCGCGCTGACCAAGCGCGGCCGTTTCATGAGCGAGGACGAGCTGCCCGAGGAGGTCCGTT
CGCATAAGGTGTCCCTGCGCAAGTCGAACGACACCGCGCTGGAATGGGCGGACGTGGTGGACGCCGGTCAAGACCCAGCC
TACCCGAACCAGTGGGCGGACAAGGTGGTGGTCTACCGCGCGTACCGCGACTTCTGCGCGGACAACGGTCGCCACCCGGT
GGAAGCGAACGAGTTCTGGAAGCGTCTCCGTCGTGACTTGCAGGTGTCCAAGGGGATCGACATCGGCGCAGCGGAGAATA
ACCGTCGCGCCCCGAAGGACTCGACCGGCAACCGCGCCCGCCTCGTGCGCATGCGCGCCGATGGGGTCCCGTCCGTGTCG
CTCGCCGTGGCCGGGGCCCGCGACACCGCGTCGGTGAAGCTGCCGCTGCCGGAGATCGAGGACTTCTCCGACCACTTCGG
CAAGCCCTCGGAGCATGGCCACGGCCCCGCTCGCGCCTAA

Upstream 100 bases:

>100_bases
CACGGGCGGGACGAGCGCGATCATCCGTCCTGTGCAGCGCTGCTGGGCCCCGAAGTTAAAAGCAGCGCCGCAGAACGATG
TCGCAAACGAAGGAACAACG

Downstream 100 bases:

>100_bases
CCTCCCCGCCCGACGTTGCCCCCTCCCAGCCCGGCCCAGCTCCGGGCTTTTCGCATGGTGCCCCGCCCCAGGCCCACGGC
GACGTGCGGGGTGCGGGATG

Product: phage/plasmid primase P4

Products: NA

Alternate protein names: Phage/Plasmid Primase P4 Family; P4 Family Phage/Plasmid Primase; ATPase-Like Protein; Phage Primase; Phage/Plasmid Primase P4 C-Terminal Protein; Nucleoside Triphosphatase D5 Family; Phage/Plasmid Primase P4 C-Terminal; Phage/Plasmid Primase P4-Like Protein

Number of amino acids: Translated: 519; Mature: 518

Protein sequence:

>519_residues
MAAYQPKNGVKSTGTRKVKDSVELYYADRLEKDANLAVGSGETPELFRWNGVFWEAQRDVALEQDALRQLQKLEPAKYSA
SKARSMVETAITRLAGHKPLPVPQKSTGVLVPLRDGLLEVLPSGVVKAHKPAPHFGVTHAINASIDWTRVGAEGTYGLLP
MTPDSRFGRFIMQVQPSPAMRDYLAECFGSTLSTMNVQKAIILEGTGANGKSLCLQILSAFHANPVAFDLSRLDGEFNTE
PLVHATLVTVSEAPPRKRPINENLFKAWVARDPVSVNRKNRVPLTVKPRASWVLAMNEAMGFSDMSHGFLRRIANVPFTQ
TIRAEDQIPDLDRLITENPDEMAIALDWLLAGLIALTKRGRFMSEDELPEEVRSHKVSLRKSNDTALEWADVVDAGQDPA
YPNQWADKVVVYRAYRDFCADNGRHPVEANEFWKRLRRDLQVSKGIDIGAAENNRRAPKDSTGNRARLVRMRADGVPSVS
LAVAGARDTASVKLPLPEIEDFSDHFGKPSEHGHGPARA

Sequences:

>Translated_519_residues
MAAYQPKNGVKSTGTRKVKDSVELYYADRLEKDANLAVGSGETPELFRWNGVFWEAQRDVALEQDALRQLQKLEPAKYSA
SKARSMVETAITRLAGHKPLPVPQKSTGVLVPLRDGLLEVLPSGVVKAHKPAPHFGVTHAINASIDWTRVGAEGTYGLLP
MTPDSRFGRFIMQVQPSPAMRDYLAECFGSTLSTMNVQKAIILEGTGANGKSLCLQILSAFHANPVAFDLSRLDGEFNTE
PLVHATLVTVSEAPPRKRPINENLFKAWVARDPVSVNRKNRVPLTVKPRASWVLAMNEAMGFSDMSHGFLRRIANVPFTQ
TIRAEDQIPDLDRLITENPDEMAIALDWLLAGLIALTKRGRFMSEDELPEEVRSHKVSLRKSNDTALEWADVVDAGQDPA
YPNQWADKVVVYRAYRDFCADNGRHPVEANEFWKRLRRDLQVSKGIDIGAAENNRRAPKDSTGNRARLVRMRADGVPSVS
LAVAGARDTASVKLPLPEIEDFSDHFGKPSEHGHGPARA
>Mature_518_residues
AAYQPKNGVKSTGTRKVKDSVELYYADRLEKDANLAVGSGETPELFRWNGVFWEAQRDVALEQDALRQLQKLEPAKYSAS
KARSMVETAITRLAGHKPLPVPQKSTGVLVPLRDGLLEVLPSGVVKAHKPAPHFGVTHAINASIDWTRVGAEGTYGLLPM
TPDSRFGRFIMQVQPSPAMRDYLAECFGSTLSTMNVQKAIILEGTGANGKSLCLQILSAFHANPVAFDLSRLDGEFNTEP
LVHATLVTVSEAPPRKRPINENLFKAWVARDPVSVNRKNRVPLTVKPRASWVLAMNEAMGFSDMSHGFLRRIANVPFTQT
IRAEDQIPDLDRLITENPDEMAIALDWLLAGLIALTKRGRFMSEDELPEEVRSHKVSLRKSNDTALEWADVVDAGQDPAY
PNQWADKVVVYRAYRDFCADNGRHPVEANEFWKRLRRDLQVSKGIDIGAAENNRRAPKDSTGNRARLVRMRADGVPSVSL
AVAGARDTASVKLPLPEIEDFSDHFGKPSEHGHGPARA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 57391; Mature: 57260

Theoretical pI: Translated: 8.99; Mature: 8.99

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAAYQPKNGVKSTGTRKVKDSVELYYADRLEKDANLAVGSGETPELFRWNGVFWEAQRDV
CCCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEECCCCH
ALEQDALRQLQKLEPAKYSASKARSMVETAITRLAGHKPLPVPQKSTGVLVPLRDGLLEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHH
LPSGVVKAHKPAPHFGVTHAINASIDWTRVGAEGTYGLLPMTPDSRFGRFIMQVQPSPAM
HCHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEECCCCHHHCEEEEEECCCHHH
RDYLAECFGSTLSTMNVQKAIILEGTGANGKSLCLQILSAFHANPVAFDLSRLDGEFNTE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCC
PLVHATLVTVSEAPPRKRPINENLFKAWVARDPVSVNRKNRVPLTVKPRASWVLAMNEAM
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEHHHC
GFSDMSHGFLRRIANVPFTQTIRAEDQIPDLDRLITENPDEMAIALDWLLAGLIALTKRG
CCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
RFMSEDELPEEVRSHKVSLRKSNDTALEWADVVDAGQDPAYPNQWADKVVVYRAYRDFCA
CCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
DNGRHPVEANEFWKRLRRDLQVSKGIDIGAAENNRRAPKDSTGNRARLVRMRADGVPSVS
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE
LAVAGARDTASVKLPLPEIEDFSDHFGKPSEHGHGPARA
EEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCC
>Mature Secondary Structure 
AAYQPKNGVKSTGTRKVKDSVELYYADRLEKDANLAVGSGETPELFRWNGVFWEAQRDV
CCCCCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCEEECCCCCCCEEEECCEEEECCCCH
ALEQDALRQLQKLEPAKYSASKARSMVETAITRLAGHKPLPVPQKSTGVLVPLRDGLLEV
HHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCEEEEHHHHHHHH
LPSGVVKAHKPAPHFGVTHAINASIDWTRVGAEGTYGLLPMTPDSRFGRFIMQVQPSPAM
HCHHHHCCCCCCCCCCCCEEECCCCCEEEECCCCCEEEEECCCCHHHCEEEEEECCCHHH
RDYLAECFGSTLSTMNVQKAIILEGTGANGKSLCLQILSAFHANPVAFDLSRLDGEFNTE
HHHHHHHHHHHHHHCCCEEEEEEEECCCCHHHHHHHHHHHHCCCCEEEEHHHCCCCCCCC
PLVHATLVTVSEAPPRKRPINENLFKAWVARDPVSVNRKNRVPLTVKPRASWVLAMNEAM
CEEEEEEEEECCCCCCCCCCCHHHHHHHHHCCCCCCCCCCCCCEEECCCCCEEEEEHHHC
GFSDMSHGFLRRIANVPFTQTIRAEDQIPDLDRLITENPDEMAIALDWLLAGLIALTKRG
CCCHHHHHHHHHHHCCCCCEEECCCCCCCCHHHHHHCCCHHHHHHHHHHHHHHHHHHHCC
RFMSEDELPEEVRSHKVSLRKSNDTALEWADVVDAGQDPAYPNQWADKVVVYRAYRDFCA
CCCCCCCCHHHHHHHHEEEECCCCCHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHH
DNGRHPVEANEFWKRLRRDLQVSKGIDIGAAENNRRAPKDSTGNRARLVRMRADGVPSVS
CCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCEE
LAVAGARDTASVKLPLPEIEDFSDHFGKPSEHGHGPARA
EEEECCCCCCEEEECCCCHHHHHHHCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA