| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027978
Identifier: 238027978
GI number: 238027978
Start: 2742842
End: 2743630
Strand: Direct
Name: 238027978
Synonym: bglu_1g24260
Alternate gene names: NA
Gene position: 2742842-2743630 (Clockwise)
Preceding gene: 238027976
Following gene: 238027979
Centisome position: 70.21
GC content: 67.43
Gene sequence:
>789_bases TTGACATGCCCCCTGAAGCTGCTAGATGTGGGGGATCGGCCTCGCACGGCCCTAACGTTCGGGAGGATCCACCCCATGCG CAACACCTTCAAAACCTCGGTCACGTTCGTGGCCCTTGCTGCGTCGGTCAGCCTCACCTCCGGCTGCGCGTCGATCAACG ACACGAGCGAATCGCTGGGCCATCACCTCGGCATTTCGAACCAGAGCGGTGCCGCTGCAGCCGGGGGTGCAGCCCTCGGT TGCCTGGGTGGCGCCGCGGTCGGCGGTGCCATCGGCGTGATCACGGGCCATGGCCTGGCCGGCGCCGGGATCGGTTGCGC CGGTGGTGCTGTTTTGCTGGGCGCCGAAAGCTACGCCGCCTCGGTGCAGAAGCAGCTCGACAACGCCCGTGCGGGCGCCA AGGTCCTGCAGGACCAGTTGACCGCGATGAACGCGCAGCAGCAGGCCGTCGTGGCAACCCAGATGGTCCACGACCACGAC AAGGACGGGAAGCCGACCAGCAAGGAAATCCCGGCCTGGTACCACACCGACATCGGCCTGCCGCCCGCCGGCATGAAGTC CCACGACCCGCGCGTTGCCGCGCTGATCGCCAAGGCCGGCGAGCTGGCGAGCAAGTCGGACAAGCCGGTGACCATCGGCG TGTACGTGATGGCGCGTGACGCGAACTGGGTCCGCGGGATCCTGGACGCTGCGATCCCGAACAGCAACAAGGCTACGTCG TACGTGGTGCACACCGTGACCTCGCCCGCGAAGGCCAAGCTCGTGTTGACGCCGGTCCCGTCCGTCTGA
Upstream 100 bases:
>100_bases TTTTTGTGCCCATCGCTCCCGTTCGCCCCCTTCCCCCGGTGACGGGCGAAGCCGGATCGCCCGCCTTTTCCAGGTGTTTT AATCCGTGCCAGGGCACAGA
Downstream 100 bases:
>100_bases TCGGCCGGACGTCCAGGGCGGCCCGCCGGTCGCCCTGCCCCATTCCAACATCTCTGGAGGAGACAGACGATGGACAAGAA AGCGCTGGAAACCGCGGTCA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 262; Mature: 261
Protein sequence:
>262_residues MTCPLKLLDVGDRPRTALTFGRIHPMRNTFKTSVTFVALAASVSLTSGCASINDTSESLGHHLGISNQSGAAAAGGAALG CLGGAAVGGAIGVITGHGLAGAGIGCAGGAVLLGAESYAASVQKQLDNARAGAKVLQDQLTAMNAQQQAVVATQMVHDHD KDGKPTSKEIPAWYHTDIGLPPAGMKSHDPRVAALIAKAGELASKSDKPVTIGVYVMARDANWVRGILDAAIPNSNKATS YVVHTVTSPAKAKLVLTPVPSV
Sequences:
>Translated_262_residues MTCPLKLLDVGDRPRTALTFGRIHPMRNTFKTSVTFVALAASVSLTSGCASINDTSESLGHHLGISNQSGAAAAGGAALG CLGGAAVGGAIGVITGHGLAGAGIGCAGGAVLLGAESYAASVQKQLDNARAGAKVLQDQLTAMNAQQQAVVATQMVHDHD KDGKPTSKEIPAWYHTDIGLPPAGMKSHDPRVAALIAKAGELASKSDKPVTIGVYVMARDANWVRGILDAAIPNSNKATS YVVHTVTSPAKAKLVLTPVPSV >Mature_261_residues TCPLKLLDVGDRPRTALTFGRIHPMRNTFKTSVTFVALAASVSLTSGCASINDTSESLGHHLGISNQSGAAAAGGAALGC LGGAAVGGAIGVITGHGLAGAGIGCAGGAVLLGAESYAASVQKQLDNARAGAKVLQDQLTAMNAQQQAVVATQMVHDHDK DGKPTSKEIPAWYHTDIGLPPAGMKSHDPRVAALIAKAGELASKSDKPVTIGVYVMARDANWVRGILDAAIPNSNKATSY VVHTVTSPAKAKLVLTPVPSV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 26546; Mature: 26414
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.8 %Cys+Met (Translated Protein) 1.5 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTCPLKLLDVGDRPRTALTFGRIHPMRNTFKTSVTFVALAASVSLTSGCASINDTSESLG CCCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH HHLGISNQSGAAAAGGAALGCLGGAAVGGAIGVITGHGLAGAGIGCAGGAVLLGAESYAA HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHH SVQKQLDNARAGAKVLQDQLTAMNAQQQAVVATQMVHDHDKDGKPTSKEIPAWYHTDIGL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC PPAGMKSHDPRVAALIAKAGELASKSDKPVTIGVYVMARDANWVRGILDAAIPNSNKATS CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCE YVVHTVTSPAKAKLVLTPVPSV EEEEEECCCCCEEEEEECCCCC >Mature Secondary Structure TCPLKLLDVGDRPRTALTFGRIHPMRNTFKTSVTFVALAASVSLTSGCASINDTSESLG CCCCEEEECCCCCCEEEEECCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHH HHLGISNQSGAAAAGGAALGCLGGAAVGGAIGVITGHGLAGAGIGCAGGAVLLGAESYAA HHCCCCCCCCCCCCCCHHHHHHHHHHHCCEEEEEECCCCCCCCCCCCCCEEEEECHHHHH SVQKQLDNARAGAKVLQDQLTAMNAQQQAVVATQMVHDHDKDGKPTSKEIPAWYHTDIGL HHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCCEEEECCCCC PPAGMKSHDPRVAALIAKAGELASKSDKPVTIGVYVMARDANWVRGILDAAIPNSNKATS CCCCCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEEEEECCHHHHHHHHHHCCCCCCCCE YVVHTVTSPAKAKLVLTPVPSV EEEEEECCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA