| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027953
Identifier: 238027953
GI number: 238027953
Start: 2668346
End: 2669032
Strand: Reverse
Name: 238027953
Synonym: bglu_1g23990
Alternate gene names: NA
Gene position: 2669032-2668346 (Counterclockwise)
Preceding gene: 238027954
Following gene: 238027952
Centisome position: 68.32
GC content: 62.88
Gene sequence:
>687_bases ATGACCACGATCCAACAGCAGACCATGCAAACCCGCAACGGCAACGTCCCGGCTCACCAAAAAGCACGTTTCAACAACCA CCCCATGGCACCAGCAACAGCTACCAGCCCGGCCGCATTGGCAACGGTCCTCTCGCTGGTCGAAACGGCCCAACTTGTTC AGAGCATCCTGACTGAATCGTTCGGCAACACGCGCTTCTACGTGAAGACCCAGCAGACGGGCAACCACACGCGCATCCAC GTCGAATGGGTAGACGGTCCGACGGAGCAGCAAGTCAACAAGATCCTCCTCCCGCTCCAGTCGTCGACCCCAGGAACCTT CGGCGGCCTCACACCGGTGGAGCACTTCCGCATCACCCCGACGGGTCCGCAGAAACTCAGCCTCTCGGCCGACCGCATCA GCGTCAAGCGTGGCTTCAGTGCCGGCCTTATCAGCACCGTGCTACAGCGTCTGGCCCACCGCCATGCGGCACGTCTTAAC CCGGAGGTGCGAAAGCTCCTGACGGTTGAATCGTTCAAAAAGGGCGCGCTCCTCGGCGTGCTGCTCTACGGCGTGCATTG GGCGAACGCTGGCAACTCGCTGCACACCGACGTCGAGACCGCGCTCCACGCGCACACGGACGTCCGGGGCTTTCCGCGCA GCGCAACCGCCGCGTCGATCTACACCCGCAAGCCCCTGAAAGCGTGA
Upstream 100 bases:
>100_bases CTGCGGCTTCACTCGGGCCCTGGCACCACGTGTCCGTCGTGCTGATTCAGGCGCACCGGCAGGCTCCGAAAAGCACCTTT CCACGACGCGAGGACACATC
Downstream 100 bases:
>100_bases ACCCAAGGGGACCGCACGCTACGGTTTGACGGTCCCGCACCCCATCCCCGGAGATCCCCATCATGGCCTACACCAGCACG AATCCTTACCTTGAAGCCCG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 228; Mature: 227
Protein sequence:
>228_residues MTTIQQQTMQTRNGNVPAHQKARFNNHPMAPATATSPAALATVLSLVETAQLVQSILTESFGNTRFYVKTQQTGNHTRIH VEWVDGPTEQQVNKILLPLQSSTPGTFGGLTPVEHFRITPTGPQKLSLSADRISVKRGFSAGLISTVLQRLAHRHAARLN PEVRKLLTVESFKKGALLGVLLYGVHWANAGNSLHTDVETALHAHTDVRGFPRSATAASIYTRKPLKA
Sequences:
>Translated_228_residues MTTIQQQTMQTRNGNVPAHQKARFNNHPMAPATATSPAALATVLSLVETAQLVQSILTESFGNTRFYVKTQQTGNHTRIH VEWVDGPTEQQVNKILLPLQSSTPGTFGGLTPVEHFRITPTGPQKLSLSADRISVKRGFSAGLISTVLQRLAHRHAARLN PEVRKLLTVESFKKGALLGVLLYGVHWANAGNSLHTDVETALHAHTDVRGFPRSATAASIYTRKPLKA >Mature_227_residues TTIQQQTMQTRNGNVPAHQKARFNNHPMAPATATSPAALATVLSLVETAQLVQSILTESFGNTRFYVKTQQTGNHTRIHV EWVDGPTEQQVNKILLPLQSSTPGTFGGLTPVEHFRITPTGPQKLSLSADRISVKRGFSAGLISTVLQRLAHRHAARLNP EVRKLLTVESFKKGALLGVLLYGVHWANAGNSLHTDVETALHAHTDVRGFPRSATAASIYTRKPLKA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 24851; Mature: 24720
Theoretical pI: Translated: 11.26; Mature: 11.26
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.3 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 0.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTIQQQTMQTRNGNVPAHQKARFNNHPMAPATATSPAALATVLSLVETAQLVQSILTES CCCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FGNTRFYVKTQQTGNHTRIHVEWVDGPTEQQVNKILLPLQSSTPGTFGGLTPVEHFRITP CCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHEEEECCCCCCCCCCCCCCHHEEEECC TGPQKLSLSADRISVKRGFSAGLISTVLQRLAHRHAARLNPEVRKLLTVESFKKGALLGV CCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH LLYGVHWANAGNSLHTDVETALHAHTDVRGFPRSATAASIYTRKPLKA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC >Mature Secondary Structure TTIQQQTMQTRNGNVPAHQKARFNNHPMAPATATSPAALATVLSLVETAQLVQSILTES CCHHHHHHHHCCCCCCCHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHH FGNTRFYVKTQQTGNHTRIHVEWVDGPTEQQVNKILLPLQSSTPGTFGGLTPVEHFRITP CCCCEEEEEECCCCCEEEEEEEECCCCCHHHHHHEEEECCCCCCCCCCCCCCHHEEEECC TGPQKLSLSADRISVKRGFSAGLISTVLQRLAHRHAARLNPEVRKLLTVESFKKGALLGV CCCCEEECCHHHHHHHCCCCHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCHHHHH LLYGVHWANAGNSLHTDVETALHAHTDVRGFPRSATAASIYTRKPLKA HHHHHHHCCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA