| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027954
Identifier: 238027954
GI number: 238027954
Start: 2673603
End: 2674160
Strand: Reverse
Name: 238027954
Synonym: bglu_1g24000
Alternate gene names: NA
Gene position: 2674160-2673603 (Counterclockwise)
Preceding gene: 238027955
Following gene: 238027953
Centisome position: 68.45
GC content: 66.67
Gene sequence:
>558_bases ATGCAATACGCCCTGATCACGCTGAAAGACACGCCGTTCATCATCGACGCCCACGAGCTGAGCGCCCTGGACACGTTCCA CGACGGCATCCGTGACCTCGGGCCCAAGCCCGACGAGAACGGCCCCCTGTACGTCGCGTACGGGGTCTACAAGCCGCAGC CCGGCATCGAGTGGGAGGACGCGATGGGCCACCTGCTCGAACGGCAGGACGTCTGGCTGGGCCACATCGCCGGCGAGCAC TGCCACACCCTCGGGTTCCACCAGGTCGACCCGCTCCCGCCGATCTCGCACGGCAGGTCGTTCAGCATCCCCTTCGCCGC GCTCATCCATGCCCACGCGGATCTGATCGAGAAGATTGGCGACCACGACAGCAGCCAGGCCGTCACCGCCTTCGTGCGCT TCTGGGACATCACGCCGGCCAGCAACCTCCTCAACCGCAAGGGCCTGCTTGCGTTCAAGGGCATCGAGCGCCGCGGCACC ACCACCGTGACGAAGGAGAACTGGCGCGATCACGTGGACCCGGAGCGGCTCCTCCGCACCGCGCTCAAGATCCACTGA
Upstream 100 bases:
>100_bases GGCACAGCCTGAAATCCTCCCCGTCGGCGTTTGACAAGCCCGTTTGAGCTGCCATGGTGGTTCGACGACCTCACCGAGGT CGCACCACCGGAGGAGACCG
Downstream 100 bases:
>100_bases TTGACCTACCGCCCAGTTCGCACGACCGTCACCCCAAGGTGGCGGTTTTGCTTTGCGCGAGGGTCGACCGTTCGTCGACT AAGCGGGGCGTGGGGAAGGT
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 185; Mature: 185
Protein sequence:
>185_residues MQYALITLKDTPFIIDAHELSALDTFHDGIRDLGPKPDENGPLYVAYGVYKPQPGIEWEDAMGHLLERQDVWLGHIAGEH CHTLGFHQVDPLPPISHGRSFSIPFAALIHAHADLIEKIGDHDSSQAVTAFVRFWDITPASNLLNRKGLLAFKGIERRGT TTVTKENWRDHVDPERLLRTALKIH
Sequences:
>Translated_185_residues MQYALITLKDTPFIIDAHELSALDTFHDGIRDLGPKPDENGPLYVAYGVYKPQPGIEWEDAMGHLLERQDVWLGHIAGEH CHTLGFHQVDPLPPISHGRSFSIPFAALIHAHADLIEKIGDHDSSQAVTAFVRFWDITPASNLLNRKGLLAFKGIERRGT TTVTKENWRDHVDPERLLRTALKIH >Mature_185_residues MQYALITLKDTPFIIDAHELSALDTFHDGIRDLGPKPDENGPLYVAYGVYKPQPGIEWEDAMGHLLERQDVWLGHIAGEH CHTLGFHQVDPLPPISHGRSFSIPFAALIHAHADLIEKIGDHDSSQAVTAFVRFWDITPASNLLNRKGLLAFKGIERRGT TTVTKENWRDHVDPERLLRTALKIH
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20836; Mature: 20836
Theoretical pI: Translated: 6.44; Mature: 6.44
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQYALITLKDTPFIIDAHELSALDTFHDGIRDLGPKPDENGPLYVAYGVYKPQPGIEWED CCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHH AMGHLLERQDVWLGHIAGEHCHTLGFHQVDPLPPISHGRSFSIPFAALIHAHADLIEKIG HHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DHDSSQAVTAFVRFWDITPASNLLNRKGLLAFKGIERRGTTTVTKENWRDHVDPERLLRT CCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHH ALKIH HHHCC >Mature Secondary Structure MQYALITLKDTPFIIDAHELSALDTFHDGIRDLGPKPDENGPLYVAYGVYKPQPGIEWED CCEEEEEECCCCEEEEHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEEEEECCCCCCCHHH AMGHLLERQDVWLGHIAGEHCHTLGFHQVDPLPPISHGRSFSIPFAALIHAHADLIEKIG HHHHHHHHCCCCHHHHCCCHHHHCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHC DHDSSQAVTAFVRFWDITPASNLLNRKGLLAFKGIERRGTTTVTKENWRDHVDPERLLRT CCCCHHHHHHHHHHHCCCCHHHHHCCCCCEEEECCCCCCCCCEECCCCCCCCCHHHHHHH ALKIH HHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA