| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027952
Identifier: 238027952
GI number: 238027952
Start: 2667966
End: 2668283
Strand: Reverse
Name: 238027952
Synonym: bglu_1g23980
Alternate gene names: NA
Gene position: 2668283-2667966 (Counterclockwise)
Preceding gene: 238027953
Following gene: 238027951
Centisome position: 68.3
GC content: 67.3
Gene sequence:
>318_bases ATGGCCTACACCAGCACGAATCCTTACCTTGAAGCCCGGTGCGAGTACGTCCTCGCGAAGCTCGCCCTCATCGCCAACCC CGACGGCGAGGACGAGACCTGGTCCCCGCTGGTCGACGCCCAGGCCCTGGGCTCGCAAGACGCAGCACGCGCGCACGAAA CGGGGGAGGACATCCCCGTGCCCGCGTTTTTCGCGGACGTCCCCGAACTGAAACGCGAATGGCTCGACGGCTGGAACCGG TACGACGAGCTGGTGGACATGCAGAGCTGCTCGGGCTGCAACAACGAGCGGGGGGACCCGTGCCCGTGCCACGGGTGA
Upstream 100 bases:
>100_bases CCGCGTCGATCTACACCCGCAAGCCCCTGAAAGCGTGAACCCAAGGGGACCGCACGCTACGGTTTGACGGTCCCGCACCC CATCCCCGGAGATCCCCATC
Downstream 100 bases:
>100_bases GCAGCGCAAGCATCAAAACGAAGCGGCCCAGGTGGGCCGCTTTGCATGGTGCTGCACATCGGTCAGTGGCGTGTGGCGTC CCCGATCAGCGGGTTCCCGA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 105; Mature: 104
Protein sequence:
>105_residues MAYTSTNPYLEARCEYVLAKLALIANPDGEDETWSPLVDAQALGSQDAARAHETGEDIPVPAFFADVPELKREWLDGWNR YDELVDMQSCSGCNNERGDPCPCHG
Sequences:
>Translated_105_residues MAYTSTNPYLEARCEYVLAKLALIANPDGEDETWSPLVDAQALGSQDAARAHETGEDIPVPAFFADVPELKREWLDGWNR YDELVDMQSCSGCNNERGDPCPCHG >Mature_104_residues AYTSTNPYLEARCEYVLAKLALIANPDGEDETWSPLVDAQALGSQDAARAHETGEDIPVPAFFADVPELKREWLDGWNRY DELVDMQSCSGCNNERGDPCPCHG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 11620; Mature: 11489
Theoretical pI: Translated: 3.94; Mature: 3.94
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.8 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 6.7 %Cys+Met (Translated Protein) 4.8 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAYTSTNPYLEARCEYVLAKLALIANPDGEDETWSPLVDAQALGSQDAARAHETGEDIPV CCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCC PAFFADVPELKREWLDGWNRYDELVDMQSCSGCNNERGDPCPCHG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC >Mature Secondary Structure AYTSTNPYLEARCEYVLAKLALIANPDGEDETWSPLVDAQALGSQDAARAHETGEDIPV CCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCHHHHHHHCCHHHHHHHCCCCCCCC PAFFADVPELKREWLDGWNRYDELVDMQSCSGCNNERGDPCPCHG CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA