| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027951
Identifier: 238027951
GI number: 238027951
Start: 2657765
End: 2659021
Strand: Reverse
Name: 238027951
Synonym: bglu_1g23970
Alternate gene names: NA
Gene position: 2659021-2657765 (Counterclockwise)
Preceding gene: 238027952
Following gene: 238027950
Centisome position: 68.07
GC content: 70.49
Gene sequence:
>1257_bases ATGTTTTCCGGTGAACTTGATTACCGAGGCCTTTCCGAAGCGCTGGGCCTTCCAGAGGTCGAGGTCAACCACCGCCTGTA CGGTGGCCGTGAGCCCTTGCTGGGCGGCGCGACGGGCGCGATGGGCGCGACGGCGTCGCTGCCGAAGCCGACCCAGACGA AGCACCGGCACCCGTTCCTGGCCCGGTATCACCCGGCGCCCGCGGGCGATGACGAGCTGCTCACGCAAGCCCAGGTAGCC CAAGAGCTGGGGTTCACGCCCGCGTCGGTCTGCAACTTGGTCAAGAAAGGGCGGCTAGCGACGGTGGAGCGTGGCGGGCG GCGGTTCATCCTCCGGGCCACCCTCGATGCGTTCCGCGCGGTGCGCTTCCCGGCGAACCGGCAGGAGGTCATGACCGTTA AGCAGGCGATGCGGGAGCTGGGCCTCACCACCGAGCACTCCGTCTACCGGTTGCTTCGTGAGAACGGCATCAAGCCCACC AAGTTCGGCCTGCAGATTTACCTGACCTGCGACGAGCTGGACACGATCCAACGGGCACGCAAGGGCAAGGGCCTGGAGCG TTCGATGGAGCCGGAGGCCAGCATGGCGCCGGCCCCAGCCGACACCGGCGCGCCGACGATCGCTCCCATGGCACCCGAGC CCATCGTGGCGCCCACGGTCCAGGCCCATACCTCGGCACAGGCCCCCACGGTTGAGGCCCAGGCCCAGGCTCCGGCGTTG CACCTGGCGCCCGTGGCGCACCCGGAGCGTCCGGTGTACGCCGGGCCGAATCGACCGAGGAAGAGGGGCGAGAGCTACGT CCAGGCGACGCGCACGGTGCCCGACCCGGTCTCGCCGACCGGATTCGCGGTGCGGCGCGGCACCCCGGTGTGCAGCGACG ACCTGTCCGACCTACACGTGCTCGTGTTCAAGAAGAGCCGGGGCGCCCTGGCCGACCGGCTGCGTTACGCACCCCTCGAG ACGATCGATGAGCGGGCTCCCAACGGCGAGACCCCGTTGCACCACGCGGCTCGGCGTGGCCACCTGCACGGCGCGGCGCT GCTCCTCGCGCACGGGGCGGACGTGCACGCGGTCGACGAGTTCGGCCTCACCCCGCTTCACCACGCGGCCGAGCAGGGCC ACCGGGACGTGGTCCTGCAGCTCATCGCGTTTGGCGCACGGCCGGAACGGAAGAGCTACGACGGGCAGACCGCGTCCGAC CTCGCGAAGGACGCCGGGACCCGGGAGGTGCTCAAGGCCGCGCGAGCGATTGGCTGA
Upstream 100 bases:
>100_bases GCGCCGCGACCAGCACTGACCGGCACCACCTCCACGGGCCAGGGCCAGTCCGAGCAGGGCTGGTTTCGGGGTACCACAAC CAACCCCATAAGGTACCCCC
Downstream 100 bases:
>100_bases ACCGGAGGCAGGGGCCAGGGGCTGACCATGGAGGAGCGGGCGGCCCCTGGTGCGGTGGAAGACCGGAACCGGCGAACGGC AACGTCAAAACCCTGGGCAC
Product: ankyrin repeat-containing protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 418; Mature: 418
Protein sequence:
>418_residues MFSGELDYRGLSEALGLPEVEVNHRLYGGREPLLGGATGAMGATASLPKPTQTKHRHPFLARYHPAPAGDDELLTQAQVA QELGFTPASVCNLVKKGRLATVERGGRRFILRATLDAFRAVRFPANRQEVMTVKQAMRELGLTTEHSVYRLLRENGIKPT KFGLQIYLTCDELDTIQRARKGKGLERSMEPEASMAPAPADTGAPTIAPMAPEPIVAPTVQAHTSAQAPTVEAQAQAPAL HLAPVAHPERPVYAGPNRPRKRGESYVQATRTVPDPVSPTGFAVRRGTPVCSDDLSDLHVLVFKKSRGALADRLRYAPLE TIDERAPNGETPLHHAARRGHLHGAALLLAHGADVHAVDEFGLTPLHHAAEQGHRDVVLQLIAFGARPERKSYDGQTASD LAKDAGTREVLKAARAIG
Sequences:
>Translated_418_residues MFSGELDYRGLSEALGLPEVEVNHRLYGGREPLLGGATGAMGATASLPKPTQTKHRHPFLARYHPAPAGDDELLTQAQVA QELGFTPASVCNLVKKGRLATVERGGRRFILRATLDAFRAVRFPANRQEVMTVKQAMRELGLTTEHSVYRLLRENGIKPT KFGLQIYLTCDELDTIQRARKGKGLERSMEPEASMAPAPADTGAPTIAPMAPEPIVAPTVQAHTSAQAPTVEAQAQAPAL HLAPVAHPERPVYAGPNRPRKRGESYVQATRTVPDPVSPTGFAVRRGTPVCSDDLSDLHVLVFKKSRGALADRLRYAPLE TIDERAPNGETPLHHAARRGHLHGAALLLAHGADVHAVDEFGLTPLHHAAEQGHRDVVLQLIAFGARPERKSYDGQTASD LAKDAGTREVLKAARAIG >Mature_418_residues MFSGELDYRGLSEALGLPEVEVNHRLYGGREPLLGGATGAMGATASLPKPTQTKHRHPFLARYHPAPAGDDELLTQAQVA QELGFTPASVCNLVKKGRLATVERGGRRFILRATLDAFRAVRFPANRQEVMTVKQAMRELGLTTEHSVYRLLRENGIKPT KFGLQIYLTCDELDTIQRARKGKGLERSMEPEASMAPAPADTGAPTIAPMAPEPIVAPTVQAHTSAQAPTVEAQAQAPAL HLAPVAHPERPVYAGPNRPRKRGESYVQATRTVPDPVSPTGFAVRRGTPVCSDDLSDLHVLVFKKSRGALADRLRYAPLE TIDERAPNGETPLHHAARRGHLHGAALLLAHGADVHAVDEFGLTPLHHAAEQGHRDVVLQLIAFGARPERKSYDGQTASD LAKDAGTREVLKAARAIG
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
Organism=Homo sapiens, GI32967601, Length=88, Percent_Identity=44.3181818181818, Blast_Score=74, Evalue=2e-13, Organism=Homo sapiens, GI18640738, Length=82, Percent_Identity=43.9024390243902, Blast_Score=73, Evalue=5e-13, Organism=Homo sapiens, GI188595682, Length=89, Percent_Identity=42.6966292134831, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI52426737, Length=89, Percent_Identity=42.6966292134831, Blast_Score=72, Evalue=7e-13, Organism=Homo sapiens, GI52426735, Length=89, Percent_Identity=42.6966292134831, Blast_Score=72, Evalue=8e-13, Organism=Homo sapiens, GI70780355, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780353, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780359, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=6e-12, Organism=Homo sapiens, GI70780357, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI215598574, Length=96, Percent_Identity=39.5833333333333, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI8051593, Length=95, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=7e-12, Organism=Homo sapiens, GI8051595, Length=95, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI8051597, Length=95, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=8e-12, Organism=Homo sapiens, GI32483404, Length=95, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI8051599, Length=95, Percent_Identity=42.1052631578947, Blast_Score=69, Evalue=9e-12, Organism=Homo sapiens, GI21389427, Length=89, Percent_Identity=43.8202247191011, Blast_Score=67, Evalue=2e-11, Organism=Homo sapiens, GI13376842, Length=91, Percent_Identity=43.956043956044, Blast_Score=67, Evalue=3e-11, Organism=Homo sapiens, GI87239981, Length=90, Percent_Identity=40, Blast_Score=66, Evalue=5e-11, Organism=Drosophila melanogaster, GI281359521, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI281359519, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28558752, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28558750, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28558756, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI28558754, Length=96, Percent_Identity=37.5, Blast_Score=70, Evalue=3e-12, Organism=Drosophila melanogaster, GI21356741, Length=91, Percent_Identity=40.6593406593407, Blast_Score=67, Evalue=2e-11, Organism=Drosophila melanogaster, GI221472807, Length=93, Percent_Identity=40.8602150537634, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI45552223, Length=93, Percent_Identity=40.8602150537634, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI17998549, Length=93, Percent_Identity=40.8602150537634, Blast_Score=67, Evalue=3e-11, Organism=Drosophila melanogaster, GI24666442, Length=102, Percent_Identity=38.2352941176471, Blast_Score=66, Evalue=6e-11, Organism=Drosophila melanogaster, GI24666446, Length=102, Percent_Identity=38.2352941176471, Blast_Score=65, Evalue=6e-11,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45102; Mature: 45102
Theoretical pI: Translated: 9.47; Mature: 9.47
Prosite motif: PS50088 ANK_REPEAT ; PS50297 ANK_REP_REGION
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.7 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFSGELDYRGLSEALGLPEVEVNHRLYGGREPLLGGATGAMGATASLPKPTQTKHRHPFL CCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARYHPAPAGDDELLTQAQVAQELGFTPASVCNLVKKGRLATVERGGRRFILRATLDAFRA EEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHH VRFPANRQEVMTVKQAMRELGLTTEHSVYRLLRENGIKPTKFGLQIYLTCDELDTIQRAR HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECEEEEEECCHHHHHHHHH KGKGLERSMEPEASMAPAPADTGAPTIAPMAPEPIVAPTVQAHTSAQAPTVEAQAQAPAL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCEE HLAPVAHPERPVYAGPNRPRKRGESYVQATRTVPDPVSPTGFAVRRGTPVCSDDLSDLHV EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEE LVFKKSRGALADRLRYAPLETIDERAPNGETPLHHAARRGHLHGAALLLAHGADVHAVDE EEEECCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEHHH FGLTPLHHAAEQGHRDVVLQLIAFGARPERKSYDGQTASDLAKDAGTREVLKAARAIG CCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCC >Mature Secondary Structure MFSGELDYRGLSEALGLPEVEVNHRLYGGREPLLGGATGAMGATASLPKPTQTKHRHPFL CCCCCCCCCCHHHHCCCCCEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC ARYHPAPAGDDELLTQAQVAQELGFTPASVCNLVKKGRLATVERGGRRFILRATLDAFRA EEECCCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHCCCEEEEECCCCEEEEHHHHHHHHH VRFPANRQEVMTVKQAMRELGLTTEHSVYRLLRENGIKPTKFGLQIYLTCDELDTIQRAR HCCCCCHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCEEECEEEEEECCHHHHHHHHH KGKGLERSMEPEASMAPAPADTGAPTIAPMAPEPIVAPTVQAHTSAQAPTVEAQAQAPAL HCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHCCCCCCCCCCHHCCCCEE HLAPVAHPERPVYAGPNRPRKRGESYVQATRTVPDPVSPTGFAVRRGTPVCSDDLSDLHV EECCCCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCCCCEEEECCCCCCCCCCCCEEE LVFKKSRGALADRLRYAPLETIDERAPNGETPLHHAARRGHLHGAALLLAHGADVHAVDE EEEECCCCHHHHHHHCCCHHHHHHCCCCCCCHHHHHHHHCCCCCEEEEEECCCCCEEHHH FGLTPLHHAAEQGHRDVVLQLIAFGARPERKSYDGQTASDLAKDAGTREVLKAARAIG CCCCHHHHHHHCCHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHCCCHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA