| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027950
Identifier: 238027950
GI number: 238027950
Start: 2656801
End: 2657346
Strand: Reverse
Name: 238027950
Synonym: bglu_1g23960
Alternate gene names: NA
Gene position: 2657346-2656801 (Counterclockwise)
Preceding gene: 238027951
Following gene: 339905973
Centisome position: 68.02
GC content: 60.07
Gene sequence:
>546_bases ATGACCACCATTTCCCGTCGCGAAACCCTGTCCTTGGTTCGCAAGGCTCTCCACGAAGCCTTCCCACAAACAACGTTCAC CCTCCAGCCGTCGCGCTCGAAGGGAAACGCCGCTTGTGGTTTCACGCTGGTGTGGGTGAAATGGATCGACGGTCCCAGCT CGTCGCAGGTCCACGATGTTGTGAGTCGGTTTGAGGATCGCATCATTGATTGGGACCGGCCCACGCCCTGGAGCAATCAA CCCAAGGCAAACCACCTCCTCGACGGGCACGCCGTGCGTTTCGACGTGTCGTTCTTTTCCCTTAAGCGAACCATGAGCGA GGAAACACTCGTCGACGTGATGGACGCCGCCGTTAAGGATTTTCCGACGCCTTATGAAACGACGGCGATCCGCTACACCA CGGTCGTCCCGCAACCGAGCAAAACGGCGGAGCGCGTTCAACGTGTGGATCAAGGCGCCTGGGAACGCCAGGAGCTGCTC GACCTGGCCGCGAACGCGATGGTCGCCAACGGTCCTACACCGACTCGGAACCGCGCACGACTGTAA
Upstream 100 bases:
>100_bases TCCTGCTTACCGGTGTTGCTCAGGAAGATGATTTTCGTAGACTGGAAGTGTAGGCAGCGCAATCGACGCAACGCCAAACC CCACCCCCCCGGAGTTCACC
Downstream 100 bases:
>100_bases GCGTTCCCCACCCTGAACGTTCACCCTGGGCCCGCGGCAACGCGGGTTCTGGCGTACGAGGGCTCGCACGGTGCGGCCCA GTGCCAGGAGAGGCAACCAC
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 181; Mature: 180
Protein sequence:
>181_residues MTTISRRETLSLVRKALHEAFPQTTFTLQPSRSKGNAACGFTLVWVKWIDGPSSSQVHDVVSRFEDRIIDWDRPTPWSNQ PKANHLLDGHAVRFDVSFFSLKRTMSEETLVDVMDAAVKDFPTPYETTAIRYTTVVPQPSKTAERVQRVDQGAWERQELL DLAANAMVANGPTPTRNRARL
Sequences:
>Translated_181_residues MTTISRRETLSLVRKALHEAFPQTTFTLQPSRSKGNAACGFTLVWVKWIDGPSSSQVHDVVSRFEDRIIDWDRPTPWSNQ PKANHLLDGHAVRFDVSFFSLKRTMSEETLVDVMDAAVKDFPTPYETTAIRYTTVVPQPSKTAERVQRVDQGAWERQELL DLAANAMVANGPTPTRNRARL >Mature_180_residues TTISRRETLSLVRKALHEAFPQTTFTLQPSRSKGNAACGFTLVWVKWIDGPSSSQVHDVVSRFEDRIIDWDRPTPWSNQP KANHLLDGHAVRFDVSFFSLKRTMSEETLVDVMDAAVKDFPTPYETTAIRYTTVVPQPSKTAERVQRVDQGAWERQELLD LAANAMVANGPTPTRNRARL
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 20498; Mature: 20367
Theoretical pI: Translated: 9.18; Mature: 9.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 1.7 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTISRRETLSLVRKALHEAFPQTTFTLQPSRSKGNAACGFTLVWVKWIDGPSSSQVHDV CCCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH VSRFEDRIIDWDRPTPWSNQPKANHLLDGHAVRFDVSFFSLKRTMSEETLVDVMDAAVKD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH FPTPYETTAIRYTTVVPQPSKTAERVQRVDQGAWERQELLDLAANAMVANGPTPTRNRAR CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCC L C >Mature Secondary Structure TTISRRETLSLVRKALHEAFPQTTFTLQPSRSKGNAACGFTLVWVKWIDGPSSSQVHDV CCCHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCEEEEEEEECCCCCCHHHHHH VSRFEDRIIDWDRPTPWSNQPKANHLLDGHAVRFDVSFFSLKRTMSEETLVDVMDAAVKD HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCEEEEEHHHHHHHHHHHHHHHHHHHHHHHHH FPTPYETTAIRYTTVVPQPSKTAERVQRVDQGAWERQELLDLAANAMVANGPTPTRNRAR CCCCCCCCEEEEEEECCCCCHHHHHHHHHHCCCHHHHHHHHHHHHHEECCCCCCCCCCCC L C
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA