| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027928
Identifier: 238027928
GI number: 238027928
Start: 2603442
End: 2604509
Strand: Reverse
Name: 238027928
Synonym: bglu_1g23710
Alternate gene names: NA
Gene position: 2604509-2603442 (Counterclockwise)
Preceding gene: 238027929
Following gene: 238027926
Centisome position: 66.67
GC content: 53.93
Gene sequence:
>1068_bases ATGCTCAATACGCTAACGATGACTGACGAGCAGTCTAGCAACGCGCGATCGAAGGCATTTTTTCTGCTGAAAAAATGGAC GAGCGTGACGTTCCTGAGAAATGCCGTCGATCTATACAGGGATTTTCTGAACGCCTATGCAAGACAATTGGATGCGCCGA GTCCGAATCAGCAGGAATTGGAGGATGCATACGTCACTGATTTTCTGCCTACATTGGCACGCATGGATGACGGTATCGAG ATTTTGTCGAGTGGTGGTGATAAGCGATCGGCCTATGGTCTTCTCATCGCAGGCAGTGAAAAAGGAAGCGAGCTGTTATT CGGCCGGAGTGCTCACGAGGTAGGGCGAACGTACGATCCCTTCTTTCATGCGCTTGGTGTCAAGGATTCAAGATATTCGG ATTTCGACTATGCAACCGGATATGCGGAAGGTGTCTGGATTGAAGAGTTGAGTTGCAAAGCACTCAATTGCACGATCGGG CTTGATTTTTCTGGATATCTTTCTTATGGAAAGCGTGCCGACGGTGGGCGCCGTATTTTCAAACACTGGACGTACGAGTC GTTATTTCAAGACCACGTTTTTCCGGCCTGGCGATATTGGCCTCCCGGGCGGAGTTATCCGGTAAATCTCGATGCCTGCC CACCGAAAAATGAATCGAGTACAGGAGAGGTGAACAGCGGAGAGGAAATACCGGTCGAGGGTATCTGGGAACCGTGGTTT CCGGGCGACGAAGTCGGCTGCCCGAATTACTTCCTCAAGGGCAGCATCGCCCACCAGTATCTGCTGGAAGGCACCAACGA CGAGTACGACGTCCGCTGGCGCTTGCTATGGGAAGACACGCGTTATCAAGGGGGTAGCATTCCCGAGGAGGAGTCGACCT ACTTCCCGAAGCCAGTCGCAGAGACGAGCCTGCGAGCCTTGCCCGGGGAAACGTGTCCGCGTACCGGTCGCTGGCACAGT CCGGCTGTCAAGGAACCGATTCATGTCGAAGCGGGAGAGCCGATGCCGGGCCCTCGGCACACGTCATGGGGTATGGTCAT TTGGCACTATGCGGATCCGCAACCGTAG
Upstream 100 bases:
>100_bases TGAAAGAGTACGAACGATCGGCTAAGATCAGGCAGGAAGGTTATGCACTTCGTGCCAGTGCCGATGTGGGTAAGCAATCG CCAAAAGAATCGAATCCATA
Downstream 100 bases:
>100_bases GATTGTCAGTGCATGGCGGGCGCTGCCATCTTAGCGGAGTCTTAGTGGAGTAGGCTGACAAGAAGCGCGAGCGCGACCTG CATGTTTGATGCGGCAGACC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 355; Mature: 355
Protein sequence:
>355_residues MLNTLTMTDEQSSNARSKAFFLLKKWTSVTFLRNAVDLYRDFLNAYARQLDAPSPNQQELEDAYVTDFLPTLARMDDGIE ILSSGGDKRSAYGLLIAGSEKGSELLFGRSAHEVGRTYDPFFHALGVKDSRYSDFDYATGYAEGVWIEELSCKALNCTIG LDFSGYLSYGKRADGGRRIFKHWTYESLFQDHVFPAWRYWPPGRSYPVNLDACPPKNESSTGEVNSGEEIPVEGIWEPWF PGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTYFPKPVAETSLRALPGETCPRTGRWHS PAVKEPIHVEAGEPMPGPRHTSWGMVIWHYADPQP
Sequences:
>Translated_355_residues MLNTLTMTDEQSSNARSKAFFLLKKWTSVTFLRNAVDLYRDFLNAYARQLDAPSPNQQELEDAYVTDFLPTLARMDDGIE ILSSGGDKRSAYGLLIAGSEKGSELLFGRSAHEVGRTYDPFFHALGVKDSRYSDFDYATGYAEGVWIEELSCKALNCTIG LDFSGYLSYGKRADGGRRIFKHWTYESLFQDHVFPAWRYWPPGRSYPVNLDACPPKNESSTGEVNSGEEIPVEGIWEPWF PGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTYFPKPVAETSLRALPGETCPRTGRWHS PAVKEPIHVEAGEPMPGPRHTSWGMVIWHYADPQP >Mature_355_residues MLNTLTMTDEQSSNARSKAFFLLKKWTSVTFLRNAVDLYRDFLNAYARQLDAPSPNQQELEDAYVTDFLPTLARMDDGIE ILSSGGDKRSAYGLLIAGSEKGSELLFGRSAHEVGRTYDPFFHALGVKDSRYSDFDYATGYAEGVWIEELSCKALNCTIG LDFSGYLSYGKRADGGRRIFKHWTYESLFQDHVFPAWRYWPPGRSYPVNLDACPPKNESSTGEVNSGEEIPVEGIWEPWF PGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTYFPKPVAETSLRALPGETCPRTGRWHS PAVKEPIHVEAGEPMPGPRHTSWGMVIWHYADPQP
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 40227; Mature: 40227
Theoretical pI: Translated: 4.75; Mature: 4.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MLNTLTMTDEQSSNARSKAFFLLKKWTSVTFLRNAVDLYRDFLNAYARQLDAPSPNQQEL CCCCEECCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EDAYVTDFLPTLARMDDGIEILSSGGDKRSAYGLLIAGSEKGSELLFGRSAHEVGRTYDP HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCH FFHALGVKDSRYSDFDYATGYAEGVWIEELSCKALNCTIGLDFSGYLSYGKRADGGRRIF HHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCHHHHCCCCCCCCHHHHH KHWTYESLFQDHVFPAWRYWPPGRSYPVNLDACPPKNESSTGEVNSGEEIPVEGIWEPWF HHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTYFPKPVA CCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHH ETSLRALPGETCPRTGRWHSPAVKEPIHVEAGEPMPGPRHTSWGMVIWHYADPQP HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCC >Mature Secondary Structure MLNTLTMTDEQSSNARSKAFFLLKKWTSVTFLRNAVDLYRDFLNAYARQLDAPSPNQQEL CCCCEECCCCCCCCCHHHHEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHHH EDAYVTDFLPTLARMDDGIEILSSGGDKRSAYGLLIAGSEKGSELLFGRSAHEVGRTYDP HHHHHHHHHHHHHHCCCCHHHHHCCCCCCCEEEEEEECCCCCCEEEECCCHHHHCCCCCH FFHALGVKDSRYSDFDYATGYAEGVWIEELSCKALNCTIGLDFSGYLSYGKRADGGRRIF HHHHHCCCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEECCCHHHHCCCCCCCCHHHHH KHWTYESLFQDHVFPAWRYWPPGRSYPVNLDACPPKNESSTGEVNSGEEIPVEGIWEPWF HHHHHHHHHHHHCCCCEEECCCCCCCCEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC PGDEVGCPNYFLKGSIAHQYLLEGTNDEYDVRWRLLWEDTRYQGGSIPEEESTYFPKPVA CCCCCCCCCCEECCHHHHHHHHCCCCCCEEEEEEEEEECCCCCCCCCCCCCCCCCCCCHH ETSLRALPGETCPRTGRWHSPAVKEPIHVEAGEPMPGPRHTSWGMVIWHYADPQP HHHHHHCCCCCCCCCCCCCCCCCCCCEEEECCCCCCCCCCCCCCEEEEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA