| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is rsbT [H]
Identifier: 238027846
GI number: 238027846
Start: 2484784
End: 2485209
Strand: Direct
Name: rsbT [H]
Synonym: bglu_1g22770
Alternate gene names: 238027846
Gene position: 2484784-2485209 (Clockwise)
Preceding gene: 238027845
Following gene: 238027847
Centisome position: 63.61
GC content: 70.66
Gene sequence:
>426_bases ATGGAAGCCGCCGGCCTCACCGTCGTCTCGACCACCCGGGTCGGACTGCGTTCGGATCAGGAAATTGTCAAGCTGCGCCA GCTGGTGCGCGACCACGCGATCGCGCTGGGCCTGTCGCTGGTCGATCAGACCAAGTTCGTCACGGCCGCCAGCGAGCTGG CCCGCAACACGCTGCTGCACGGCGGCGGCGGCGACGCCGAACTGAGCGTGCTGGAGCGCGGCGCGCGCAAGGGCCTGCGG GTCGCGTTCATCGACACCGGCCCGGGCATCGCCGACGTCGACCGCGCGCTGCAGGACGGCTTCACCACCGCCGGGGGCCT GGGGCTCGGGCTCGGCGGCGCGCGGCGCCTGTCCGACGAGTTCCAGATCGAGACCGAGCGCGGCAAGGGCACCCGAATCA CGATCGCGAAATGGAAAATCCGCTAA
Upstream 100 bases:
>100_bases GACTCACGCTGACCGGGGTGCGCACCGCGCTCGACGTCGACCGCGGCATGGCACTGCTGCGGCAGCGGCGGCGCCATTGA CCCCGCCGACTCATTCCGCC
Downstream 100 bases:
>100_bases GCGGCCTGCGTGCCGCGCACGCCTCGTTCGAGATCGGCGATCCGAGCGGCGTGGCGTTCGCGCGCCGCGGCGCGCACGAC ATCGCGCGCCGCGGCCTGTC
Product: putative anti-sigma regulatory factor, serine/threonine protein kinase
Products: NA
Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]
Number of amino acids: Translated: 141; Mature: 141
Protein sequence:
>141_residues MEAAGLTVVSTTRVGLRSDQEIVKLRQLVRDHAIALGLSLVDQTKFVTAASELARNTLLHGGGGDAELSVLERGARKGLR VAFIDTGPGIADVDRALQDGFTTAGGLGLGLGGARRLSDEFQIETERGKGTRITIAKWKIR
Sequences:
>Translated_141_residues MEAAGLTVVSTTRVGLRSDQEIVKLRQLVRDHAIALGLSLVDQTKFVTAASELARNTLLHGGGGDAELSVLERGARKGLR VAFIDTGPGIADVDRALQDGFTTAGGLGLGLGGARRLSDEFQIETERGKGTRITIAKWKIR >Mature_141_residues MEAAGLTVVSTTRVGLRSDQEIVKLRQLVRDHAIALGLSLVDQTKFVTAASELARNTLLHGGGGDAELSVLERGARKGLR VAFIDTGPGIADVDRALQDGFTTAGGLGLGLGGARRLSDEFQIETERGKGTRITIAKWKIR
Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s
COG id: COG2172
COG function: function code T; Anti-sigma regulatory factor (Ser/Thr protein kinase)
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 14951; Mature: 14951
Theoretical pI: Translated: 10.46; Mature: 10.46
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 0.7 %Met (Translated Protein) 0.7 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 0.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEAAGLTVVSTTRVGLRSDQEIVKLRQLVRDHAIALGLSLVDQTKFVTAASELARNTLLH CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE GGGGDAELSVLERGARKGLRVAFIDTGPGIADVDRALQDGFTTAGGLGLGLGGARRLSDE CCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEECCCCCHHCCCC FQIETERGKGTRITIAKWKIR EEEEECCCCCCEEEEEEEEEC >Mature Secondary Structure MEAAGLTVVSTTRVGLRSDQEIVKLRQLVRDHAIALGLSLVDQTKFVTAASELARNTLLH CCCCCEEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEE GGGGDAELSVLERGARKGLRVAFIDTGPGIADVDRALQDGFTTAGGLGLGLGGARRLSDE CCCCCHHHHHHHHHHHCCCEEEEEECCCCHHHHHHHHHCCCCCCCCCEECCCCCHHCCCC FQIETERGKGTRITIAKWKIR EEEEECCCCCCEEEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]