| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is rsbT [H]
Identifier: 238027847
GI number: 238027847
Start: 2485194
End: 2486330
Strand: Direct
Name: rsbT [H]
Synonym: bglu_1g22780
Alternate gene names: 238027847
Gene position: 2485194-2486330 (Clockwise)
Preceding gene: 238027846
Following gene: 238027848
Centisome position: 63.62
GC content: 75.2
Gene sequence:
>1137_bases ATGGAAAATCCGCTAAGCGGCCTGCGTGCCGCGCACGCCTCGTTCGAGATCGGCGATCCGAGCGGCGTGGCGTTCGCGCG CCGCGGCGCGCACGACATCGCGCGCCGCGGCCTGTCGGGCGAAACCGACCTCGGCCGGGTCGCGCTGATCGTCACCGAGG CCGCCACCAACATCCTCAAGCACGCCAAGCACGGCGAACTGCTGGTGCGCGAGCTGCCGGCGCACGGGCCGCAAGCCGGG CCGCAGGCAGGCAGCGGCGTCGAGCTGATCGCGCTCGACAACGGCCCCGGCATGCCCGACGTGCGCGCCGCGTTCGAGGA CGGCTATTCGAACACCGGCACGCCCGGCACCGGGCTCGGCGCGATCCGCAGGCTGTCCGACGAACTCGCCGTGTACTCGC AGCCGGGGCTGGGCACCGTGGTGCGCGCCGCCGTGCGCACCCGGGGCGGCGGCGGCAGCGCGACCGCGACGGCCGTGGCG GGCCTCGACATCGGCGGGGTCTGCGTGCCCTACCCGGGCGAGACCGTGAGCGGCGACGGCTGGGGCATCGAGGTGGGCGG CGCCGGCCTCGTCGTGACGGTGGCCGACGGCCTCGGCCATGGCCCCGAGGCGCACGTCGCCGCCACCTGCGCGATCGACA TCGCGCACCGCAACCCCGGCCTCGAACCGGGCCGCCTGATGCAGGCGATGCACGATGCGCTGCGCGCCACGCGCGGCGCG GCCGTGGCCATCGCGCGGTTCGATCCGGCCCGCACCGGACTGTCGTTCGCCGGAGTGGGCAACATCGCCGCGTCGCTGTG GGGCGGCGGCCGGCTGCTACCCGGGCCGCAGCAGGTCGGACGCCCCGCGGCCGATGCCGCCGGCTCGCGCGGCGAACGCG AAAGCTGGCAGCTCGTCTCGCGCAACGGTATCGTGGGGCATGCGATGCGCGATGCGCAGGAGATCGCGGCGCGCTGGCAG GACGGCGCGATGCTGATCCTCAGTTCCGACGGCCTCGGAACGCGCTGGGACCTGGCCGCCTACCCGGGGCTGCGGCTGCA GCCGGCGGCCGTGATCGCGGCCGTGCTGTATCGCGACTTCTCGCGCCGCCGCGACGACGCGACGGTGGTCGTGGTCAAGA CGGCGCCGTCACGCTGA
Upstream 100 bases:
>100_bases CCGGGGGCCTGGGGCTCGGGCTCGGCGGCGCGCGGCGCCTGTCCGACGAGTTCCAGATCGAGACCGAGCGCGGCAAGGGC ACCCGAATCACGATCGCGAA
Downstream 100 bases:
>100_bases CGAACCGGGCCGACGAACCAGGGCGATACCGAGACTCACGAACCGATCCATCCGAGCATGGCCATCCAGATACAGCTCAT TTCGCTCGATTCCGAGGAAC
Product: Anti-sigma regulatory factor, serine/threonine protein kinase and phosphatase
Products: NA
Alternate protein names: Anti-sigma-B factor rsbT; Switch protein/serine kinase [H]
Number of amino acids: Translated: 378; Mature: 378
Protein sequence:
>378_residues MENPLSGLRAAHASFEIGDPSGVAFARRGAHDIARRGLSGETDLGRVALIVTEAATNILKHAKHGELLVRELPAHGPQAG PQAGSGVELIALDNGPGMPDVRAAFEDGYSNTGTPGTGLGAIRRLSDELAVYSQPGLGTVVRAAVRTRGGGGSATATAVA GLDIGGVCVPYPGETVSGDGWGIEVGGAGLVVTVADGLGHGPEAHVAATCAIDIAHRNPGLEPGRLMQAMHDALRATRGA AVAIARFDPARTGLSFAGVGNIAASLWGGGRLLPGPQQVGRPAADAAGSRGERESWQLVSRNGIVGHAMRDAQEIAARWQ DGAMLILSSDGLGTRWDLAAYPGLRLQPAAVIAAVLYRDFSRRRDDATVVVVKTAPSR
Sequences:
>Translated_378_residues MENPLSGLRAAHASFEIGDPSGVAFARRGAHDIARRGLSGETDLGRVALIVTEAATNILKHAKHGELLVRELPAHGPQAG PQAGSGVELIALDNGPGMPDVRAAFEDGYSNTGTPGTGLGAIRRLSDELAVYSQPGLGTVVRAAVRTRGGGGSATATAVA GLDIGGVCVPYPGETVSGDGWGIEVGGAGLVVTVADGLGHGPEAHVAATCAIDIAHRNPGLEPGRLMQAMHDALRATRGA AVAIARFDPARTGLSFAGVGNIAASLWGGGRLLPGPQQVGRPAADAAGSRGERESWQLVSRNGIVGHAMRDAQEIAARWQ DGAMLILSSDGLGTRWDLAAYPGLRLQPAAVIAAVLYRDFSRRRDDATVVVVKTAPSR >Mature_378_residues MENPLSGLRAAHASFEIGDPSGVAFARRGAHDIARRGLSGETDLGRVALIVTEAATNILKHAKHGELLVRELPAHGPQAG PQAGSGVELIALDNGPGMPDVRAAFEDGYSNTGTPGTGLGAIRRLSDELAVYSQPGLGTVVRAAVRTRGGGGSATATAVA GLDIGGVCVPYPGETVSGDGWGIEVGGAGLVVTVADGLGHGPEAHVAATCAIDIAHRNPGLEPGRLMQAMHDALRATRGA AVAIARFDPARTGLSFAGVGNIAASLWGGGRLLPGPQQVGRPAADAAGSRGERESWQLVSRNGIVGHAMRDAQEIAARWQ DGAMLILSSDGLGTRWDLAAYPGLRLQPAAVIAAVLYRDFSRRRDDATVVVVKTAPSR
Specific function: Provides the crucial link between the upstream module (communication of environmental stress) and the downstream module (integration of the environmental signals with signals of energy stress) that compose the signal transduction pathway controlling the s
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003594 [H]
Pfam domain/function: PF02518 HATPase_c [H]
EC number: =2.7.11.1 [H]
Molecular weight: Translated: 38664; Mature: 38664
Theoretical pI: Translated: 7.37; Mature: 7.37
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.5 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.1 %Cys+Met (Translated Protein) 0.5 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 2.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MENPLSGLRAAHASFEIGDPSGVAFARRGAHDIARRGLSGETDLGRVALIVTEAATNILK CCCHHHHHHHHHCEEECCCCCCCHHHHCCHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHH HAKHGELLVRELPAHGPQAGPQAGSGVELIALDNGPGMPDVRAAFEDGYSNTGTPGTGLG HCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHH AIRRLSDELAVYSQPGLGTVVRAAVRTRGGGGSATATAVAGLDIGGVCVPYPGETVSGDG HHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCHHHEEECCCCCCEEECCCCCCCCCCC WGIEVGGAGLVVTVADGLGHGPEAHVAATCAIDIAHRNPGLEPGRLMQAMHDALRATRGA CEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC AVAIARFDPARTGLSFAGVGNIAASLWGGGRLLPGPQQVGRPAADAAGSRGERESWQLVS EEEEEECCCHHCCCEECCHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCCCHHHHHHH RNGIVGHAMRDAQEIAARWQDGAMLILSSDGLGTRWDLAAYPGLRLQPAAVIAAVLYRDF CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHH SRRRDDATVVVVKTAPSR HCCCCCCEEEEEECCCCC >Mature Secondary Structure MENPLSGLRAAHASFEIGDPSGVAFARRGAHDIARRGLSGETDLGRVALIVTEAATNILK CCCHHHHHHHHHCEEECCCCCCCHHHHCCHHHHHHCCCCCCCCCCEEEEEEEHHHHHHHH HAKHGELLVRELPAHGPQAGPQAGSGVELIALDNGPGMPDVRAAFEDGYSNTGTPGTGLG HCCCCCHHHHHCCCCCCCCCCCCCCCEEEEEECCCCCCCHHHHHHHCCCCCCCCCCCHHH AIRRLSDELAVYSQPGLGTVVRAAVRTRGGGGSATATAVAGLDIGGVCVPYPGETVSGDG HHHHHHHHHHEECCCCHHHHHHHHHHCCCCCCCCHHHEEECCCCCCEEECCCCCCCCCCC WGIEVGGAGLVVTVADGLGHGPEAHVAATCAIDIAHRNPGLEPGRLMQAMHDALRATRGA CEEEECCCEEEEEEECCCCCCCCCCEEEEEEEEEECCCCCCCHHHHHHHHHHHHHHCCCC AVAIARFDPARTGLSFAGVGNIAASLWGGGRLLPGPQQVGRPAADAAGSRGERESWQLVS EEEEEECCCHHCCCEECCHHHHHHHHCCCCCCCCCHHHHCCCCHHHCCCCCCCHHHHHHH RNGIVGHAMRDAQEIAARWQDGAMLILSSDGLGTRWDLAAYPGLRLQPAAVIAAVLYRDF CCCCCHHHHHHHHHHHHHCCCCEEEEEECCCCCCEEEHHCCCCCCCCHHHHHHHHHHHHH SRRRDDATVVVVKTAPSR HCCCCCCEEEEEECCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 8002610; 9384377; 8002609; 8824586; 9786195 [H]