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The map label for this gene is rsbS [H]

Identifier: 238027845

GI number: 238027845

Start: 2484404

End: 2484763

Strand: Direct

Name: rsbS [H]

Synonym: bglu_1g22760

Alternate gene names: 238027845

Gene position: 2484404-2484763 (Clockwise)

Preceding gene: 238027844

Following gene: 238027846

Centisome position: 63.6

GC content: 66.67

Gene sequence:

>360_bases
ATGGACCGCATTCCGATATTGCAGCTCGGAGACTGCCTGATCATCGCGATCCAGGCCGACATGCACGACCGGCTCGCCCT
GTCGCTGCAGGAGGATCTGACCGAGCGCATCGTCAAGGTGTCGGCCAAGGGCGTGCTGCTCGACATCTCCGCGCTCGACG
TGGTCGATTCGTTCATCGGCCGGATGATCAGCAACATCGCCGCGATGGCCACCGTGCTCGACGCCGACACGGTGGTGGTC
GGCATGCAGCCGTCGGTGGCGATCACGCTGGTCGAGCTCGGACTCACGCTGACCGGGGTGCGCACCGCGCTCGACGTCGA
CCGCGGCATGGCACTGCTGCGGCAGCGGCGGCGCCATTGA

Upstream 100 bases:

>100_bases
AACGTCACGACCAAATCGACGCTCGCCGATGCCTTCGTCGTCGCGCTCAAGCGCAACGGCTCGAGCATCGCCGGCGGCGC
CGTCGAGTGAGGCGCGCGAC

Downstream 100 bases:

>100_bases
CCCCGCCGACTCATTCCGCCATGGAAGCCGCCGGCCTCACCGTCGTCTCGACCACCCGGGTCGGACTGCGTTCGGATCAG
GAAATTGTCAAGCTGCGCCA

Product: Anti-sigma-factor antagonist

Products: NA

Alternate protein names: Stressosome protein rsbS [H]

Number of amino acids: Translated: 119; Mature: 119

Protein sequence:

>119_residues
MDRIPILQLGDCLIIAIQADMHDRLALSLQEDLTERIVKVSAKGVLLDISALDVVDSFIGRMISNIAAMATVLDADTVVV
GMQPSVAITLVELGLTLTGVRTALDVDRGMALLRQRRRH

Sequences:

>Translated_119_residues
MDRIPILQLGDCLIIAIQADMHDRLALSLQEDLTERIVKVSAKGVLLDISALDVVDSFIGRMISNIAAMATVLDADTVVV
GMQPSVAITLVELGLTLTGVRTALDVDRGMALLRQRRRH
>Mature_119_residues
MDRIPILQLGDCLIIAIQADMHDRLALSLQEDLTERIVKVSAKGVLLDISALDVVDSFIGRMISNIAAMATVLDADTVVV
GMQPSVAITLVELGLTLTGVRTALDVDRGMALLRQRRRH

Specific function: Negative regulator of sigma-B activity. Non- phosphorylated rsbS binds to rsbT, preventing its association with rsbU. Requires any one of rsbRA, rsbRB, rsbRC or rsbRD to sequester rsbT. When rsbS and the rsbR paralog(s) are phosphorylated, they release rs

COG id: COG1366

COG function: function code T; Anti-anti-sigma regulatory factor (antagonist of anti-sigma factor)

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 STAS domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002645 [H]

Pfam domain/function: PF01740 STAS [H]

EC number: NA

Molecular weight: Translated: 12919; Mature: 12919

Theoretical pI: Translated: 5.07; Mature: 5.07

Prosite motif: PS50801 STAS

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
5.0 %Met     (Translated Protein)
5.9 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
5.0 %Met     (Mature Protein)
5.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDRIPILQLGDCLIIAIQADMHDRLALSLQEDLTERIVKVSAKGVLLDISALDVVDSFIG
CCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
RMISNIAAMATVLDADTVVVGMQPSVAITLVELGLTLTGVRTALDVDRGMALLRQRRRH
HHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MDRIPILQLGDCLIIAIQADMHDRLALSLQEDLTERIVKVSAKGVLLDISALDVVDSFIG
CCCCCEEEECCEEEEEEECCCCHHHHHHHHHHHHHHHHHHCCCCEEEEHHHHHHHHHHHH
RMISNIAAMATVLDADTVVVGMQPSVAITLVELGLTLTGVRTALDVDRGMALLRQRRRH
HHHHHHHHHHHHHCCCEEEEECCCCCEEHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8002610; 9384377; 8824586; 8682789 [H]