| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027839
Identifier: 238027839
GI number: 238027839
Start: 2479130
End: 2479882
Strand: Reverse
Name: 238027839
Synonym: bglu_1g22700
Alternate gene names: NA
Gene position: 2479882-2479130 (Counterclockwise)
Preceding gene: 238027840
Following gene: 238027838
Centisome position: 63.48
GC content: 68.53
Gene sequence:
>753_bases GTGGGCGCCATGCGTGAGATCGGCCAGCCTGATTATTTCGCCGTGTTCGATGAACTCGAGCACGCGCCGGACCGCGCCGC GCTGCGCACGATCGTCACGCGGCTGATCCGGCCGCTGGGCGGCGAGCGTTTCGCGTTCCTGCTGATGCCGGCCGACGGCG CCGCGCATCAGCGGCTCGACGACGACGCGGTGCTGACCGACGCGGCGCCGGGCTGGCTGGCGGGCTATCGCGAGCGGCGC GGGTTCGACGCGGACCCCGGCATCGCCTACGCGCGCCGTGCCTCCACGCCCACCACGGCCGGCTCGATCGCGCCGCAGAC CGATGGCCAGCTCGCGCTGCGCACCCACGATGCCGCGCACGGCTTCGGCGCGAAGCTGATCGTGCCGGCCCATTTGCCGA CGCTGAACCTGGGCGGCGTGCTCTATGTGGGCAGCGGCGCGCCCGCACGCGAGGCCGAGCCGGCGCTGCACGCCAAACGG ATGTTGTTCCGGCTGATCGCGAATGAGCTGCTGGACTGGCACGCGCGGCAGATCCGCCGCGACGCGGCGCGCTCGCTGGC GCTGACCGAACGCGAGACGGGCATCCTGCGGCTGCTGCGCAGCGGCTATACCGCCCACAACATCGCCAAGGAATTGAGCG TGGCGGTGCCGACCGTGTACGGATATTACAAGCGGCTGAATGAAAAATTTTCCGTAAATCACATTTCGCTAACGGTAAAG AGAGCCGCTACCCTGGGTTTGCTGGATCAATAA
Upstream 100 bases:
>100_bases CGCATGACTGTCCTGACGGAAACCCGGATGCAGCACCCGGCCCCGGCCCGACCAGCCCGGCCGGCATCGACGCGGCCCGC GCCGCGGCGCGAGGCGCGAG
Downstream 100 bases:
>100_bases ATGATTCGCTTAAAAAAAATGTGTGGTATGGAATCGTTTTTCATCGATAAGGGGCTATCAGGCGGCACGGATATTTAATA TAGTGGCTGGAAAATTCGGG
Product: LuxR family transcriptional regulator
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 250; Mature: 249
Protein sequence:
>250_residues MGAMREIGQPDYFAVFDELEHAPDRAALRTIVTRLIRPLGGERFAFLLMPADGAAHQRLDDDAVLTDAAPGWLAGYRERR GFDADPGIAYARRASTPTTAGSIAPQTDGQLALRTHDAAHGFGAKLIVPAHLPTLNLGGVLYVGSGAPAREAEPALHAKR MLFRLIANELLDWHARQIRRDAARSLALTERETGILRLLRSGYTAHNIAKELSVAVPTVYGYYKRLNEKFSVNHISLTVK RAATLGLLDQ
Sequences:
>Translated_250_residues MGAMREIGQPDYFAVFDELEHAPDRAALRTIVTRLIRPLGGERFAFLLMPADGAAHQRLDDDAVLTDAAPGWLAGYRERR GFDADPGIAYARRASTPTTAGSIAPQTDGQLALRTHDAAHGFGAKLIVPAHLPTLNLGGVLYVGSGAPAREAEPALHAKR MLFRLIANELLDWHARQIRRDAARSLALTERETGILRLLRSGYTAHNIAKELSVAVPTVYGYYKRLNEKFSVNHISLTVK RAATLGLLDQ >Mature_249_residues GAMREIGQPDYFAVFDELEHAPDRAALRTIVTRLIRPLGGERFAFLLMPADGAAHQRLDDDAVLTDAAPGWLAGYRERRG FDADPGIAYARRASTPTTAGSIAPQTDGQLALRTHDAAHGFGAKLIVPAHLPTLNLGGVLYVGSGAPAREAEPALHAKRM LFRLIANELLDWHARQIRRDAARSLALTERETGILRLLRSGYTAHNIAKELSVAVPTVYGYYKRLNEKFSVNHISLTVKR AATLGLLDQ
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 27324; Mature: 27192
Theoretical pI: Translated: 9.76; Mature: 9.76
Prosite motif: PS00622 HTH_LUXR_1 ; PS50043 HTH_LUXR_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 1.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MGAMREIGQPDYFAVFDELEHAPDRAALRTIVTRLIRPLGGERFAFLLMPADGAAHQRLD CCCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCC DDAVLTDAAPGWLAGYRERRGFDADPGIAYARRASTPTTAGSIAPQTDGQLALRTHDAAH CCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC GFGAKLIVPAHLPTLNLGGVLYVGSGAPAREAEPALHAKRMLFRLIANELLDWHARQIRR CCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAARSLALTERETGILRLLRSGYTAHNIAKELSVAVPTVYGYYKRLNEKFSVNHISLTVK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH RAATLGLLDQ HHHHHCCCCC >Mature Secondary Structure GAMREIGQPDYFAVFDELEHAPDRAALRTIVTRLIRPLGGERFAFLLMPADGAAHQRLD CCCHHCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHCCC DDAVLTDAAPGWLAGYRERRGFDADPGIAYARRASTPTTAGSIAPQTDGQLALRTHDAAH CCCEEECCCCHHHHHHHHHCCCCCCCCCHHHHCCCCCCCCCCCCCCCCCEEEEEECCCCC GFGAKLIVPAHLPTLNLGGVLYVGSGAPAREAEPALHAKRMLFRLIANELLDWHARQIRR CCCCEEEEECCCCCCCCCCEEEECCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH DAARSLALTERETGILRLLRSGYTAHNIAKELSVAVPTVYGYYKRLNEKFSVNHISLTVK HHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEH RAATLGLLDQ HHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA