| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is gltT [H]
Identifier: 238027840
GI number: 238027840
Start: 2480332
End: 2481579
Strand: Reverse
Name: gltT [H]
Synonym: bglu_1g22710
Alternate gene names: 238027840
Gene position: 2481579-2480332 (Counterclockwise)
Preceding gene: 238027841
Following gene: 238027839
Centisome position: 63.52
GC content: 67.39
Gene sequence:
>1248_bases ATGAATCAAAAGAATAGCAGGACCTCGCTGCCACTGATCATGATCGTCGCGCTGATTCTCGGCGCGTTCACCGGCGTGTA CGCCCCGCGTTTCTCGGCCGACGTCGGCTTCCTCTCGACGCTGTTCGGCCACGCCATCAAGATGGTGGTGATGCCGCTGA TCCTGCTGTCGGTGGTGGTGGGCAGCTATCGCGCCGTCGAGCAGCGCCGCCACCTCGGGCGCACGGCCGTGATCGCGATC CTGTTCTTCATCGTCATGACGGTCGTGTCGAGCGCGCTCGGGCTCGGTCTCTACTGGCTGTTCCGTCCGGGCCTCGGCGC CTCGATGACGGGCTCGGGCGCGCTGCCCGACCATCTCGCCACCAGCATCGACTGGATCAAGTTCATCACCGACATGGTGC CGCAGAACCTGGTGGCCGCGCTCTCGTCGGGCAACGCGATTCCGGTGCTGGTGTTCGGCGTGATGCTCGGCACCGCGCTC GGCGCCACCGGCGAAGCGGGGCGCCCCGCGATCAACCTGTTCGCCTCGCTGCTGGCCGGCCTGTTCAAGATGGTCGAGTG GATCGTCGCGCTCTCGCCGCTGGCGATCTTCGCGGCGGTGGCCGGGCTGATGAGCAGCCGCGGCGTGGCCGGCCTGATGC CGCTCGTCAAGCTGCTCGGCATCGCCTATCTGGGCATGGCGATCCTGGCCGTGCTGCTGACCCTGATCATCGTGGCCACC GGCAACCGGCCGCTCGCCGTGATCCGCAAGGTCAGCGAGCCGCTGATTCTCGCCTTCACCACGCGCTCGTCGGAAATCAC CTATCCGGTGCATCTGAAGAAGCTGACGGAGATGGGCGTGCCGTCCTCGATCGCCTCCACCATCCTGCCGCTGTCCTACA TCTTCAACCGCGACGGCGCGGTGCTCTATACCGCGCTCGCGGTCGGCTATCTGGCCGACGCCTATCACGTGGTCTGGAGC TGGCCGCTGGCGCTGACGATTCTCGCGCTGACGATCCTCACCATCGACGGCGCCGCGAACGTGCCGTCGGGCGCGATCGT CGCGATCACCATCGTGCTGGCCGCGGTGGGGCTGCCCGCCGAGGCGGTGCTGCTGATCCTCGGCGTGGACGCGTTCTTCG ACATGGGCCGCACGGCCATGAACGTCTACGCGAGCACGGTGGCGATGACGGTGTCGCTGCGCCTGTCGAGCGACGAACGG ATCACGGCGGCCGAGGGCGTCGACGGCGCCGCTTCGTACCGGACCTGA
Upstream 100 bases:
>100_bases TCCGCGATCCGCGACGGGCAACCCGAGGAAGCCCGCGGTCACATGTGGAATCACATCGTGGATGGCACCCCTGCAAGAAT CAAATTAATCCGGGCCAGAA
Downstream 100 bases:
>100_bases TCGACCCGCGCCGGGCGGGCCCGCCTGCGCGGGCGTCCGGCGCCGTGACGCGAGGCACGCCGCGCGCCGGCCTGATGAAG GCGGCACGGCTTCGCCCCGC
Product: Sodium:dicarboxylate symporter
Products: L-aspartate [Cytoplasm]; Proton [Cytoplasm]; L-glutamate [Cytoplasm] [C]
Alternate protein names: Glutamate-aspartate carrier protein [H]
Number of amino acids: Translated: 415; Mature: 415
Protein sequence:
>415_residues MNQKNSRTSLPLIMIVALILGAFTGVYAPRFSADVGFLSTLFGHAIKMVVMPLILLSVVVGSYRAVEQRRHLGRTAVIAI LFFIVMTVVSSALGLGLYWLFRPGLGASMTGSGALPDHLATSIDWIKFITDMVPQNLVAALSSGNAIPVLVFGVMLGTAL GATGEAGRPAINLFASLLAGLFKMVEWIVALSPLAIFAAVAGLMSSRGVAGLMPLVKLLGIAYLGMAILAVLLTLIIVAT GNRPLAVIRKVSEPLILAFTTRSSEITYPVHLKKLTEMGVPSSIASTILPLSYIFNRDGAVLYTALAVGYLADAYHVVWS WPLALTILALTILTIDGAANVPSGAIVAITIVLAAVGLPAEAVLLILGVDAFFDMGRTAMNVYASTVAMTVSLRLSSDER ITAAEGVDGAASYRT
Sequences:
>Translated_415_residues MNQKNSRTSLPLIMIVALILGAFTGVYAPRFSADVGFLSTLFGHAIKMVVMPLILLSVVVGSYRAVEQRRHLGRTAVIAI LFFIVMTVVSSALGLGLYWLFRPGLGASMTGSGALPDHLATSIDWIKFITDMVPQNLVAALSSGNAIPVLVFGVMLGTAL GATGEAGRPAINLFASLLAGLFKMVEWIVALSPLAIFAAVAGLMSSRGVAGLMPLVKLLGIAYLGMAILAVLLTLIIVAT GNRPLAVIRKVSEPLILAFTTRSSEITYPVHLKKLTEMGVPSSIASTILPLSYIFNRDGAVLYTALAVGYLADAYHVVWS WPLALTILALTILTIDGAANVPSGAIVAITIVLAAVGLPAEAVLLILGVDAFFDMGRTAMNVYASTVAMTVSLRLSSDER ITAAEGVDGAASYRT >Mature_415_residues MNQKNSRTSLPLIMIVALILGAFTGVYAPRFSADVGFLSTLFGHAIKMVVMPLILLSVVVGSYRAVEQRRHLGRTAVIAI LFFIVMTVVSSALGLGLYWLFRPGLGASMTGSGALPDHLATSIDWIKFITDMVPQNLVAALSSGNAIPVLVFGVMLGTAL GATGEAGRPAINLFASLLAGLFKMVEWIVALSPLAIFAAVAGLMSSRGVAGLMPLVKLLGIAYLGMAILAVLLTLIIVAT GNRPLAVIRKVSEPLILAFTTRSSEITYPVHLKKLTEMGVPSSIASTILPLSYIFNRDGAVLYTALAVGYLADAYHVVWS WPLALTILALTILTIDGAANVPSGAIVAITIVLAAVGLPAEAVLLILGVDAFFDMGRTAMNVYASTVAMTVSLRLSSDER ITAAEGVDGAASYRT
Specific function: This carrier protein is part of the Na(+)-dependent, binding-protein-independent glutamate-aspartate transport system [H]
COG id: COG1301
COG function: function code C; Na+/H+-dicarboxylate symporters
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the sodium:dicarboxylate (SDF) symporter (TC 2.A.23) family [H]
Homologues:
Organism=Homo sapiens, GI21314632, Length=384, Percent_Identity=29.6875, Blast_Score=105, Evalue=7e-23, Organism=Homo sapiens, GI169790839, Length=305, Percent_Identity=29.1803278688525, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI5032093, Length=369, Percent_Identity=29.5392953929539, Blast_Score=100, Evalue=2e-21, Organism=Homo sapiens, GI4827012, Length=267, Percent_Identity=31.4606741573034, Blast_Score=99, Evalue=1e-20, Organism=Homo sapiens, GI223468564, Length=243, Percent_Identity=32.5102880658436, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI223468566, Length=243, Percent_Identity=32.5102880658436, Blast_Score=97, Evalue=3e-20, Organism=Homo sapiens, GI40254478, Length=427, Percent_Identity=23.8875878220141, Blast_Score=94, Evalue=2e-19, Organism=Homo sapiens, GI194239697, Length=252, Percent_Identity=29.7619047619048, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI66773030, Length=388, Percent_Identity=25.2577319587629, Blast_Score=91, Evalue=2e-18, Organism=Escherichia coli, GI1790514, Length=416, Percent_Identity=31.4903846153846, Blast_Score=173, Evalue=2e-44, Organism=Escherichia coli, GI1789947, Length=392, Percent_Identity=30.3571428571429, Blast_Score=158, Evalue=7e-40, Organism=Escherichia coli, GI1788024, Length=381, Percent_Identity=26.7716535433071, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1789473, Length=397, Percent_Identity=25.4408060453401, Blast_Score=67, Evalue=2e-12, Organism=Caenorhabditis elegans, GI71996953, Length=437, Percent_Identity=27.0022883295195, Blast_Score=123, Evalue=2e-28, Organism=Caenorhabditis elegans, GI17537407, Length=405, Percent_Identity=26.6666666666667, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983099, Length=432, Percent_Identity=26.8518518518519, Blast_Score=113, Evalue=2e-25, Organism=Caenorhabditis elegans, GI71983106, Length=432, Percent_Identity=26.8518518518519, Blast_Score=112, Evalue=4e-25, Organism=Caenorhabditis elegans, GI193206654, Length=412, Percent_Identity=25.7281553398058, Blast_Score=105, Evalue=5e-23, Organism=Caenorhabditis elegans, GI193206505, Length=425, Percent_Identity=25.4117647058824, Blast_Score=99, Evalue=4e-21, Organism=Caenorhabditis elegans, GI17541374, Length=403, Percent_Identity=25.8064516129032, Blast_Score=93, Evalue=2e-19, Organism=Drosophila melanogaster, GI24583025, Length=429, Percent_Identity=24.9417249417249, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI17137668, Length=429, Percent_Identity=24.9417249417249, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI24583023, Length=429, Percent_Identity=24.9417249417249, Blast_Score=111, Evalue=1e-24, Organism=Drosophila melanogaster, GI281360483, Length=424, Percent_Identity=23.8207547169811, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI17137666, Length=424, Percent_Identity=23.8207547169811, Blast_Score=72, Evalue=6e-13, Organism=Drosophila melanogaster, GI281360481, Length=424, Percent_Identity=23.8207547169811, Blast_Score=72, Evalue=8e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001991 - InterPro: IPR018107 [H]
Pfam domain/function: PF00375 SDF [H]
EC number: NA
Molecular weight: Translated: 43530; Mature: 43530
Theoretical pI: Translated: 9.75; Mature: 9.75
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.9 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 3.9 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MNQKNSRTSLPLIMIVALILGAFTGVYAPRFSADVGFLSTLFGHAIKMVVMPLILLSVVV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GSYRAVEQRRHLGRTAVIAILFFIVMTVVSSALGLGLYWLFRPGLGASMTGSGALPDHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH TSIDWIKFITDMVPQNLVAALSSGNAIPVLVFGVMLGTALGATGEAGRPAINLFASLLAG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LFKMVEWIVALSPLAIFAAVAGLMSSRGVAGLMPLVKLLGIAYLGMAILAVLLTLIIVAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNRPLAVIRKVSEPLILAFTTRSSEITYPVHLKKLTEMGVPSSIASTILPLSYIFNRDGA CCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH VLYTALAVGYLADAYHVVWSWPLALTILALTILTIDGAANVPSGAIVAITIVLAAVGLPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCH EAVLLILGVDAFFDMGRTAMNVYASTVAMTVSLRLSSDERITAAEGVDGAASYRT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCEEHHCCCCCCCCCCC >Mature Secondary Structure MNQKNSRTSLPLIMIVALILGAFTGVYAPRFSADVGFLSTLFGHAIKMVVMPLILLSVVV CCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHH GSYRAVEQRRHLGRTAVIAILFFIVMTVVSSALGLGLYWLFRPGLGASMTGSGALPDHLA HHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCHHHH TSIDWIKFITDMVPQNLVAALSSGNAIPVLVFGVMLGTALGATGEAGRPAINLFASLLAG HHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHH LFKMVEWIVALSPLAIFAAVAGLMSSRGVAGLMPLVKLLGIAYLGMAILAVLLTLIIVAT HHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC GNRPLAVIRKVSEPLILAFTTRSSEITYPVHLKKLTEMGVPSSIASTILPLSYIFNRDGA CCCHHHHHHHCCCCEEEEEEECCCCCCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCH VLYTALAVGYLADAYHVVWSWPLALTILALTILTIDGAANVPSGAIVAITIVLAAVGLPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCH EAVLLILGVDAFFDMGRTAMNVYASTVAMTVSLRLSSDERITAAEGVDGAASYRT HHHHHHHHHHHHHHCCHHHHHHHHHHHHHEEEEEECCCCCEEHHCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: L-aspartate [Periplasm]; Proton [Periplasm]; L-glutamate [Periplasm] [C]
Specific reaction: Proton [Periplasm] + L-aspartate [Periplasm] = Proton [Cytoplasm] + L-aspartate [Cytoplasm] Proton [Periplasm] + L-glutamate [Periplasm] = Proton [Cytoplasm] + L-glutamate [Cytoplasm] [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 1359385 [H]