| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is quiP [H]
Identifier: 238027838
GI number: 238027838
Start: 2475005
End: 2477392
Strand: Reverse
Name: quiP [H]
Synonym: bglu_1g22690
Alternate gene names: 238027838
Gene position: 2477392-2475005 (Counterclockwise)
Preceding gene: 238027839
Following gene: 238027836
Centisome position: 63.42
GC content: 74.58
Gene sequence:
>2388_bases ATGACTCTCCGAACTCGCCGCCCATGGTGGTGGCTCAAGATGCTGGCGAGCCTCGTCGTGCTCACCGTCGCGCTGGCGGC TGCCGGCATGTTCCTGTTCCTGCGCGCGAGCCTGCCGCAACTCGACGGCGAGATCCGCGCGCCGGGTCTTGGCGGCCCGG TGACGGCCACCCGCGACGCGCTCGGCGTGCCGACCGTGACCGCGCGCGACCGCTTCGATCTGGCCTACGGCATCGGCTAT CTGCACGCCCAGGACCGCTTCTTCCAGATGGACTATCTGCGCCGCAGCGGCGCCGGCGAACTGGCCGAGCTGGTGGGGCC GCCCGCGCTCGATGTCGATCGCGCGCATCGGCTGTTCCGGCTGCGCGCACGCGCCGAGGCCACGCTCGCGCGGCTGCCGC CCGACCAGCGGCGGCTGCTAGATCGCTACACGCAGGGCGTCAACGACGGACTCGCCGCGCTGGGCGCGCGGCCGTTCGAA TACGCGCTGCTCGGCGCGCGGCCGATGCGCTGGCGGCCCGAGGATTCGCTGCTGGCGATCTGGGCGATGTACTTCGAACT GCAGGGCAACCTGCTGCCTCGCGCGATCGCGCGCCACTGGCTCGCCATGCACGCCAGCCCGTCGCAGGCGGCGTTCCTGC TGCCGGTGGCCTCGGCGCACGACGCGCCGCTCGATGCCCCGGCCATCGATCTGCCCGCGCCGCCGCTGCCGGCCAGCGCG CCGGACGGCTTCCGCGCGCCGGTCGCCGCCGATGCCGACGCGGCACCGCGGCTTGCCGAGCTCGATATCCGCTCGTCGAT CGGCAGCAACAACTGGGTGATCGCGGGCGCGCGCAGCGCGAACGGCGCGGCGATCGTCGGCAACGACATGCATCTCGGCA TCGCGCTGCCGAACACCTGGTATCGCGCGGCGCTGGTGACCGACGACGGCGTGCGGCCGGCGCGGCGCGTGACCGGCGTG ACGCTGGCCGGGGTGCCTGCGGTGGTGGTCGGCAGCAACGGCGAGGTGGCCTGGGGCTTCACCGACGGCTATATCGACGG CCTCGATCTGGTGCCGGTCGAGCACGACGGCGGCAATCCGCTCGCGCTTCGCGTCGGCGGCCGGCACGAGACGGCGCGGC GCTACGACGAGGCGATCCGCGTCCACGGCGCCGCGTCCGTCACGCTGCCGGTGACCGAGACCTCGCTCGGGCCGCTGCGC GAAATCGGCGGGCGCTGGTACGCGATTCACTGGATCGCGCAGGTGCCCGGCGCGGTGAACCTCGAACTCGCGCGCATGGC CGATGCCCGCGACCTCGGCGATGCGCTGCGCGTGGCGAACGAAGCCGGCATCCCGGCCGAGAACGTGGTGGTGGGCGATC GCGCGGGCCATATCGGCTGGTCGATCGCCGGGCCGTTGCCGGACCGCCGCGCTGCCGCCGCTGCCGCTGACGGCGCCGCA TGGCAGGCCGTGTTGCCGCCCGAGGCCGTGCCGCGCGTCGTCGATCCGGCGGCGGGGCAGCTCTGGAGCGCCAACAACCG CCAGCTGGCCGGCGCGGCGTACCGGCTGATCGGCGACGGCGGCGCCGACAACGGCGCGCGCGCCACCCAGTTGCGCGACG ACCTCGCCGCGCTCGGCCGCACCGACGAGCGGGCCGCCTACCGCGTCGATCTCGACGATCGCGCGCGCTTCATCGCGCCG TGGCGCGAGCGCGCGCTCGGCGTGCTCGACGACGCGGCGCTCGCCGGCCACCCGCAGCGCGCGGCATTCCGCCGGCTGCT GATGCAGCGCTGGGACGTGCGGGCCAGCGTGGCGTCGGTCGGCTACCGGCTCGCGCGCGGCTTCCTCTACACGCTGGCCG ACGACGTGTTCGGCGGGCTGAACGCGCAGCTCGGGCGCGACGATGCCGAAGCCGCCTACCCGCTCGCCAATCCGCGCTGG GCGGTGGTGCTGGAGCGGCTGCTCGACGCGCAGCCGACCGGCTGGCTGCCGGCCGGTGCCGCGAGCTGGCGCGACCTGCA GCTCGGCGCGATCGACCGGACCATCGCCGAACTCACGCGCGATGGCACGCCGCTCGACCAGGCCACCTGGGGCCGCCGCA ACACGCTGCGCATCGCGCATCCGTTCGCGGCCAGCGTGCCGCTGTTCGGCCGCTGGCTGAGCGCGCCCGCCGACGAGGTG CCCGGCGACGCCGGCATGCCGCGCGTGGCCGGTCCGAACTTCGGTCAGTCCGAGCGGATGGTGGTGGCGCCGGGGCACGA GTCGCAGGGGATCTTCAACATGCCGGGCGGGCAGAGCGGGCATCCGCTGAGCGCGTTCTTCCTGGCCGGGCACGAGGCCT GGGTGAAGGGCGAGGCGCAGCCGTTCCTGCCCGGCCAGACGCGGCATACGCTGCGGTTCGTGCCCTAG
Upstream 100 bases:
>100_bases GATCGGCGCGGACCACCGGAGCGCGCGCCGCCGCGCGTGACCGGGAGCGTTCGCGATGCCGGTGCGCCCCGCGTTGCCGT GTCATTCATTCATCATTCCC
Downstream 100 bases:
>100_bases GCGGGGCGGCCGGCGTGATCCCGCCGGCCTGGCCGGCCCGGTCGCCGTCAGCCCTGCCGCGGGTTCGCGTCAAGAGGGAA TCGGCCGGCGCGGCGCAGGC
Product: putative penicillin amidase
Products: NA
Alternate protein names: AHL acylase quiP; Acyl-HSL acylase quiP; Quorum signal utilization and inactivation protein; Acyl-HSL acylase quiP subunit alpha; Acyl-HSL acylase quiP subunit beta [H]
Number of amino acids: Translated: 795; Mature: 794
Protein sequence:
>795_residues MTLRTRRPWWWLKMLASLVVLTVALAAAGMFLFLRASLPQLDGEIRAPGLGGPVTATRDALGVPTVTARDRFDLAYGIGY LHAQDRFFQMDYLRRSGAGELAELVGPPALDVDRAHRLFRLRARAEATLARLPPDQRRLLDRYTQGVNDGLAALGARPFE YALLGARPMRWRPEDSLLAIWAMYFELQGNLLPRAIARHWLAMHASPSQAAFLLPVASAHDAPLDAPAIDLPAPPLPASA PDGFRAPVAADADAAPRLAELDIRSSIGSNNWVIAGARSANGAAIVGNDMHLGIALPNTWYRAALVTDDGVRPARRVTGV TLAGVPAVVVGSNGEVAWGFTDGYIDGLDLVPVEHDGGNPLALRVGGRHETARRYDEAIRVHGAASVTLPVTETSLGPLR EIGGRWYAIHWIAQVPGAVNLELARMADARDLGDALRVANEAGIPAENVVVGDRAGHIGWSIAGPLPDRRAAAAAADGAA WQAVLPPEAVPRVVDPAAGQLWSANNRQLAGAAYRLIGDGGADNGARATQLRDDLAALGRTDERAAYRVDLDDRARFIAP WRERALGVLDDAALAGHPQRAAFRRLLMQRWDVRASVASVGYRLARGFLYTLADDVFGGLNAQLGRDDAEAAYPLANPRW AVVLERLLDAQPTGWLPAGAASWRDLQLGAIDRTIAELTRDGTPLDQATWGRRNTLRIAHPFAASVPLFGRWLSAPADEV PGDAGMPRVAGPNFGQSERMVVAPGHESQGIFNMPGGQSGHPLSAFFLAGHEAWVKGEAQPFLPGQTRHTLRFVP
Sequences:
>Translated_795_residues MTLRTRRPWWWLKMLASLVVLTVALAAAGMFLFLRASLPQLDGEIRAPGLGGPVTATRDALGVPTVTARDRFDLAYGIGY LHAQDRFFQMDYLRRSGAGELAELVGPPALDVDRAHRLFRLRARAEATLARLPPDQRRLLDRYTQGVNDGLAALGARPFE YALLGARPMRWRPEDSLLAIWAMYFELQGNLLPRAIARHWLAMHASPSQAAFLLPVASAHDAPLDAPAIDLPAPPLPASA PDGFRAPVAADADAAPRLAELDIRSSIGSNNWVIAGARSANGAAIVGNDMHLGIALPNTWYRAALVTDDGVRPARRVTGV TLAGVPAVVVGSNGEVAWGFTDGYIDGLDLVPVEHDGGNPLALRVGGRHETARRYDEAIRVHGAASVTLPVTETSLGPLR EIGGRWYAIHWIAQVPGAVNLELARMADARDLGDALRVANEAGIPAENVVVGDRAGHIGWSIAGPLPDRRAAAAAADGAA WQAVLPPEAVPRVVDPAAGQLWSANNRQLAGAAYRLIGDGGADNGARATQLRDDLAALGRTDERAAYRVDLDDRARFIAP WRERALGVLDDAALAGHPQRAAFRRLLMQRWDVRASVASVGYRLARGFLYTLADDVFGGLNAQLGRDDAEAAYPLANPRW AVVLERLLDAQPTGWLPAGAASWRDLQLGAIDRTIAELTRDGTPLDQATWGRRNTLRIAHPFAASVPLFGRWLSAPADEV PGDAGMPRVAGPNFGQSERMVVAPGHESQGIFNMPGGQSGHPLSAFFLAGHEAWVKGEAQPFLPGQTRHTLRFVP >Mature_794_residues TLRTRRPWWWLKMLASLVVLTVALAAAGMFLFLRASLPQLDGEIRAPGLGGPVTATRDALGVPTVTARDRFDLAYGIGYL HAQDRFFQMDYLRRSGAGELAELVGPPALDVDRAHRLFRLRARAEATLARLPPDQRRLLDRYTQGVNDGLAALGARPFEY ALLGARPMRWRPEDSLLAIWAMYFELQGNLLPRAIARHWLAMHASPSQAAFLLPVASAHDAPLDAPAIDLPAPPLPASAP DGFRAPVAADADAAPRLAELDIRSSIGSNNWVIAGARSANGAAIVGNDMHLGIALPNTWYRAALVTDDGVRPARRVTGVT LAGVPAVVVGSNGEVAWGFTDGYIDGLDLVPVEHDGGNPLALRVGGRHETARRYDEAIRVHGAASVTLPVTETSLGPLRE IGGRWYAIHWIAQVPGAVNLELARMADARDLGDALRVANEAGIPAENVVVGDRAGHIGWSIAGPLPDRRAAAAAADGAAW QAVLPPEAVPRVVDPAAGQLWSANNRQLAGAAYRLIGDGGADNGARATQLRDDLAALGRTDERAAYRVDLDDRARFIAPW RERALGVLDDAALAGHPQRAAFRRLLMQRWDVRASVASVGYRLARGFLYTLADDVFGGLNAQLGRDDAEAAYPLANPRWA VVLERLLDAQPTGWLPAGAASWRDLQLGAIDRTIAELTRDGTPLDQATWGRRNTLRIAHPFAASVPLFGRWLSAPADEVP GDAGMPRVAGPNFGQSERMVVAPGHESQGIFNMPGGQSGHPLSAFFLAGHEAWVKGEAQPFLPGQTRHTLRFVP
Specific function: Catalyzes the deacylation of acyl-homoserine lactone (AHL or acyl-HSL), releasing homoserine lactone (HSL) and the corresponding fatty acid. Possesses a specificity for the degradation of long-chain acyl-HSLs (side chains of seven or more carbons in lengt
COG id: COG2366
COG function: function code R; Protein related to penicillin acylase
Gene ontology:
Cell location: Periplasm (Potential) [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the peptidase S45 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR014395 - InterPro: IPR002692 [H]
Pfam domain/function: PF01804 Penicil_amidase [H]
EC number: =3.5.1.97 [H]
Molecular weight: Translated: 85310; Mature: 85179
Theoretical pI: Translated: 7.36; Mature: 7.36
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 1.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLRTRRPWWWLKMLASLVVLTVALAAAGMFLFLRASLPQLDGEIRAPGLGGPVTATRDA CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCC LGVPTVTARDRFDLAYGIGYLHAQDRFFQMDYLRRSGAGELAELVGPPALDVDRAHRLFR CCCCCCCCCCCCCHHHCEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHH LRARAEATLARLPPDQRRLLDRYTQGVNDGLAALGARPFEYALLGARPMRWRPEDSLLAI HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHEECCCCCCCCCCCHHHHH WAMYFELQGNLLPRAIARHWLAMHASPSQAAFLLPVASAHDAPLDAPAIDLPAPPLPASA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC PDGFRAPVAADADAAPRLAELDIRSSIGSNNWVIAGARSANGAAIVGNDMHLGIALPNTW CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCE YRAALVTDDGVRPARRVTGVTLAGVPAVVVGSNGEVAWGFTDGYIDGLDLVPVEHDGGNP EEEEEEECCCCCHHHHHCCEEEECCCEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCE LALRVGGRHETARRYDEAIRVHGAASVTLPVTETSLGPLREIGGRWYAIHWIAQVPGAVN EEEEECCCHHHHHHHHHHHEEECCEEEEEEECCCCCCHHHHHCCCEEEEEEEECCCCCCC LELARMADARDLGDALRVANEAGIPAENVVVGDRAGHIGWSIAGPLPDRRAAAAAADGAA EEHHHHHCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHCCCCC WQAVLPPEAVPRVVDPAAGQLWSANNRQLAGAAYRLIGDGGADNGARATQLRDDLAALGR EEEECCHHHCCCCCCCCCCCEECCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCC TDERAAYRVDLDDRARFIAPWRERALGVLDDAALAGHPQRAAFRRLLMQRWDVRASVASV CCCCCEEEEECCCCCCEECCHHHHHCCHHCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHH GYRLARGFLYTLADDVFGGLNAQLGRDDAEAAYPLANPRWAVVLERLLDAQPTGWLPAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC ASWRDLQLGAIDRTIAELTRDGTPLDQATWGRRNTLRIAHPFAASVPLFGRWLSAPADEV CCCCEEECCHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHC PGDAGMPRVAGPNFGQSERMVVAPGHESQGIFNMPGGQSGHPLSAFFLAGHEAWVKGEAQ CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEECCHHEECCCCC PFLPGQTRHTLRFVP CCCCCCCCCCEEECC >Mature Secondary Structure TLRTRRPWWWLKMLASLVVLTVALAAAGMFLFLRASLPQLDGEIRAPGLGGPVTATRDA CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCEECCCCCCCCCCCCCC LGVPTVTARDRFDLAYGIGYLHAQDRFFQMDYLRRSGAGELAELVGPPALDVDRAHRLFR CCCCCCCCCCCCCHHHCEEEEECCCHHHHHHHHHHCCCCHHHHHCCCCCCCHHHHHHHHH LRARAEATLARLPPDQRRLLDRYTQGVNDGLAALGARPFEYALLGARPMRWRPEDSLLAI HHHHHHHHHHHCCCHHHHHHHHHHCCCCHHHHHHCCCCCHHHEECCCCCCCCCCCHHHHH WAMYFELQGNLLPRAIARHWLAMHASPSQAAFLLPVASAHDAPLDAPAIDLPAPPLPASA HHHHHHHCCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCC PDGFRAPVAADADAAPRLAELDIRSSIGSNNWVIAGARSANGAAIVGNDMHLGIALPNTW CCCCCCCCCCCCCCCCCHHHHHHHHHCCCCCEEEEECCCCCCCEEEECCEEEEEECCCCE YRAALVTDDGVRPARRVTGVTLAGVPAVVVGSNGEVAWGFTDGYIDGLDLVPVEHDGGNP EEEEEEECCCCCHHHHHCCEEEECCCEEEECCCCCEEEEECCCCCCCEEEEEEECCCCCE LALRVGGRHETARRYDEAIRVHGAASVTLPVTETSLGPLREIGGRWYAIHWIAQVPGAVN EEEEECCCHHHHHHHHHHHEEECCEEEEEEECCCCCCHHHHHCCCEEEEEEEECCCCCCC LELARMADARDLGDALRVANEAGIPAENVVVGDRAGHIGWSIAGPLPDRRAAAAAADGAA EEHHHHHCHHHHHHHHHHHHHCCCCCCCEEECCCCCCCCEEECCCCCCHHHHHHHCCCCC WQAVLPPEAVPRVVDPAAGQLWSANNRQLAGAAYRLIGDGGADNGARATQLRDDLAALGR EEEECCHHHCCCCCCCCCCCEECCCCCEECCEEEEEEECCCCCCCCHHHHHHHHHHHHCC TDERAAYRVDLDDRARFIAPWRERALGVLDDAALAGHPQRAAFRRLLMQRWDVRASVASV CCCCCEEEEECCCCCCEECCHHHHHCCHHCCHHHCCCCHHHHHHHHHHHHHCHHHHHHHH GYRLARGFLYTLADDVFGGLNAQLGRDDAEAAYPLANPRWAVVLERLLDAQPTGWLPAGA HHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHCCCCCCCCCCCC ASWRDLQLGAIDRTIAELTRDGTPLDQATWGRRNTLRIAHPFAASVPLFGRWLSAPADEV CCCCEEECCHHHHHHHHHHCCCCCCCHHCCCCCCEEEEECCCCCCCCHHHHHHCCCHHHC PGDAGMPRVAGPNFGQSERMVVAPGHESQGIFNMPGGQSGHPLSAFFLAGHEAWVKGEAQ CCCCCCCCCCCCCCCCCCEEEEECCCCCCCEEECCCCCCCCCEEEEEEECCHHEECCCCC PFLPGQTRHTLRFVP CCCCCCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]