| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is mocC [H]
Identifier: 238027782
GI number: 238027782
Start: 2405252
End: 2406169
Strand: Direct
Name: mocC [H]
Synonym: bglu_1g22060
Alternate gene names: 238027782
Gene position: 2405252-2406169 (Clockwise)
Preceding gene: 238027781
Following gene: 238027783
Centisome position: 61.57
GC content: 69.83
Gene sequence:
>918_bases ATGAGTTACGACATCCGAATCGGCATCAACCCGCTGTCGTGGATGAACGACGACCTGCCTTCGCTCGGCGGCGAGACCCC GCTGGCCGTGGCGCTGACCGAAGGCAGGCGGATCGGCTACGCGGGCTTCGAGCTCGGCAACAAGTTCCCGCGCGAGCCGC AGGCGCTCAAGGCGCTGCTGGCCGAATACGAGCTCGCGCTCGTCTCGGGCTGGTATTCGGGGCGGCTCGCCGAGCGCAGC GCCCAGGAGGAGATCGACGCGGTCGGCCCGCACCTCGAGCTGCTCGCGAAGAACGGCGCGACGGTGATGGTGTACGGCGA GGTGGCCGCCTCGATCCAGGGCGCGGCCGAGGTGCCGCTCTACCAGCGGCCGCGCTTCGTCGGCGAGGCGCAGTGGGAGC AGTACGCGCGCCGGCTCGACGAATTCGCGCGCTTCACGCTGAGCCAGGGCGTGCGCACCGCCTATCACCATCACATGGGC GCCTATGTCGAATCGCCCGCCGACATCGACCGGCTGATGGCGCTGACCGACGACGCGCTCGGGCTGCTGTTCGACACCGG CCACATCACGTTCGGCGGCGGCGATCCGCTCGCGGTGCTGGAGCGGCACATCCACCGCGTCTGCCACGTCCACTGCAAGG ACGTGCGCACCGAGGTGATCCGGCTCGCGCGCAACCGCAACTGGAGCTTCCTGCAATCGGTCATCAACGGCGCGTTCACG GTGCCCGGCGACGGCGACGTCGATTTCCCGGCCGTCGTCGAGCGCCTGAAACGCCATGGCTACCGCGGCTGGTTCGTGGT CGAGGCCGAACAGGACCCGGTGATCGCGCCGAGCTACGCGTTCGCCGACCAGGGCTACCGCACGCTGCGCGCGCTGCTCG ACGCGCCGCTCGCATCCACCGGCAAGGAGGCCGCGTAA
Upstream 100 bases:
>100_bases CGAACTACGAAGCACGGCTCGCCGCCCGCGCCGGCGCCTCCGGTGCCGGCCTGCCCGCCGCCGGCTGCACCGCTGAACCC CACTCCCCGGAATCATCGAC
Downstream 100 bases:
>100_bases TGAGTTCCCATCCGAATCCGAATCCGCCCGCGAGCCTGCTCGTCAAGGCCGCCGCCAGCGGCCGGTCGATCGCCTGCGTC ACGCCGGAATCGGCGCGCTG
Product: IolE protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 305; Mature: 304
Protein sequence:
>305_residues MSYDIRIGINPLSWMNDDLPSLGGETPLAVALTEGRRIGYAGFELGNKFPREPQALKALLAEYELALVSGWYSGRLAERS AQEEIDAVGPHLELLAKNGATVMVYGEVAASIQGAAEVPLYQRPRFVGEAQWEQYARRLDEFARFTLSQGVRTAYHHHMG AYVESPADIDRLMALTDDALGLLFDTGHITFGGGDPLAVLERHIHRVCHVHCKDVRTEVIRLARNRNWSFLQSVINGAFT VPGDGDVDFPAVVERLKRHGYRGWFVVEAEQDPVIAPSYAFADQGYRTLRALLDAPLASTGKEAA
Sequences:
>Translated_305_residues MSYDIRIGINPLSWMNDDLPSLGGETPLAVALTEGRRIGYAGFELGNKFPREPQALKALLAEYELALVSGWYSGRLAERS AQEEIDAVGPHLELLAKNGATVMVYGEVAASIQGAAEVPLYQRPRFVGEAQWEQYARRLDEFARFTLSQGVRTAYHHHMG AYVESPADIDRLMALTDDALGLLFDTGHITFGGGDPLAVLERHIHRVCHVHCKDVRTEVIRLARNRNWSFLQSVINGAFT VPGDGDVDFPAVVERLKRHGYRGWFVVEAEQDPVIAPSYAFADQGYRTLRALLDAPLASTGKEAA >Mature_304_residues SYDIRIGINPLSWMNDDLPSLGGETPLAVALTEGRRIGYAGFELGNKFPREPQALKALLAEYELALVSGWYSGRLAERSA QEEIDAVGPHLELLAKNGATVMVYGEVAASIQGAAEVPLYQRPRFVGEAQWEQYARRLDEFARFTLSQGVRTAYHHHMGA YVESPADIDRLMALTDDALGLLFDTGHITFGGGDPLAVLERHIHRVCHVHCKDVRTEVIRLARNRNWSFLQSVINGAFTV PGDGDVDFPAVVERLKRHGYRGWFVVEAEQDPVIAPSYAFADQGYRTLRALLDAPLASTGKEAA
Specific function: Involved in rhizopine (L-3-O-methyl-scyllo-inosamine) catabolism [H]
COG id: COG1082
COG function: function code G; Sugar phosphate isomerases/epimerases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the iolE/mocC family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013022 - InterPro: IPR012307 [H]
Pfam domain/function: PF01261 AP_endonuc_2 [H]
EC number: NA
Molecular weight: Translated: 33706; Mature: 33574
Theoretical pI: Translated: 5.58; Mature: 5.58
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 1.6 %Met (Translated Protein) 2.3 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 1.3 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSYDIRIGINPLSWMNDDLPSLGGETPLAVALTEGRRIGYAGFELGNKFPREPQALKALL CCEEEEECCCHHHHCCCCHHHCCCCCCEEEEEECCCEECCHHHHHCCCCCCCHHHHHHHH AEYELALVSGWYSGRLAERSAQEEIDAVGPHLELLAKNGATVMVYGEVAASIQGAAEVPL HHHHHHHHHCCHHCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECHHHHHCCCCCCCC YQRPRFVGEAQWEQYARRLDEFARFTLSQGVRTAYHHHMGAYVESPADIDRLMALTDDAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH GLLFDTGHITFGGGDPLAVLERHIHRVCHVHCKDVRTEVIRLARNRNWSFLQSVINGAFT EEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEE VPGDGDVDFPAVVERLKRHGYRGWFVVEAEQDPVIAPSYAFADQGYRTLRALLDAPLAST CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GKEAA CCCCC >Mature Secondary Structure SYDIRIGINPLSWMNDDLPSLGGETPLAVALTEGRRIGYAGFELGNKFPREPQALKALL CEEEEECCCHHHHCCCCHHHCCCCCCEEEEEECCCEECCHHHHHCCCCCCCHHHHHHHH AEYELALVSGWYSGRLAERSAQEEIDAVGPHLELLAKNGATVMVYGEVAASIQGAAEVPL HHHHHHHHHCCHHCHHHHHHHHHHHHHCCCHHHHHCCCCCEEEEEECHHHHHCCCCCCCC YQRPRFVGEAQWEQYARRLDEFARFTLSQGVRTAYHHHMGAYVESPADIDRLMALTDDAL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHCCHH GLLFDTGHITFGGGDPLAVLERHIHRVCHVHCKDVRTEVIRLARNRNWSFLQSVINGAFT EEEEECCEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCEEE VPGDGDVDFPAVVERLKRHGYRGWFVVEAEQDPVIAPSYAFADQGYRTLRALLDAPLAST CCCCCCCCHHHHHHHHHHCCCCEEEEEECCCCCCCCCCHHHHHHHHHHHHHHHHCCCCCC GKEAA CCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 7845353 [H]