Click here to switch to the map view.

The map label for this gene is iolB [H]

Identifier: 238027783

GI number: 238027783

Start: 2406169

End: 2407032

Strand: Direct

Name: iolB [H]

Synonym: bglu_1g22070

Alternate gene names: 238027783

Gene position: 2406169-2407032 (Clockwise)

Preceding gene: 238027782

Following gene: 238027785

Centisome position: 61.59

GC content: 71.18

Gene sequence:

>864_bases
ATGAGTTCCCATCCGAATCCGAATCCGCCCGCGAGCCTGCTCGTCAAGGCCGCCGCCAGCGGCCGGTCGATCGCCTGCGT
CACGCCGGAATCGGCGCGCTGGCACCACGTGGGCTTCGCCGCATACCGCCTCGCGGCCGGCGAAAGCCTGACGATTCACG
AGCCCGCGCGCGAGACCTGCCTGGTGGTGATGGCGGGCCAGGTGGACGTGGCGGACCAGGACGGCACGCGCTGGGAGGCG
CTCGGCTCGCGCGAGAGCGTGTTCGACGACGCGCCGCCCGCCGCGCTCTACCTGCCGCCCGGCCGCCGCGTGACCGTCAC
GGCGCGGCGCGCCACCGAACTCGGCGTGGCGAGCGCGCCCGGCACCGGCCGCTATCCGCCGCGGCGCATCGAGCCCGGCC
AGATGAAGCGCTCGGTGCGCGGCACCGGCGCGAACACGCGCTACGTCTGCGACATCCTCCCGCAAACCGAGCCGGCCGAG
GCGCTGCTGGTGGTGGAGGTGCGCACCCCGTCGGGACATTCGTCGAGCTACCCGCCGCACAAGCACGACACCGACGACGT
GCCGGCCGAGAGCTTCCTGGAGGAGACCTACTACCATCGCGTGAACCCGCCGCAAGGCTTCGTGTTCCAGCGCGTCTACA
CCGACGAGCGCGACCTCGACGAATCGATGGCCGTGTCCGATCACGACGTGGTGATGGTGCCGCGCGGCTATCACCCGGTG
GTGGTGCCGTATGGCTATGACTCGTACTATCTGAACGTGATGGCCGGGCCGACGCGCGTCTGGCACTTCAGGAACGATCC
GCAGCACGACTGGATCGCGAAGCGCGACGCGGCGCAGGCGCAGGCCGCGCAGGCGCAACGCTGA

Upstream 100 bases:

>100_bases
CGGTGATCGCGCCGAGCTACGCGTTCGCCGACCAGGGCTACCGCACGCTGCGCGCGCTGCTCGACGCGCCGCTCGCATCC
ACCGGCAAGGAGGCCGCGTA

Downstream 100 bases:

>100_bases
GGTCGCCAGGCCGACGGGCGGCGCTCGCCAAGCGCGGCCGGCCGCCGTCTAGCCGCCGTCTAGCCGCCGTCGGCCGGCGG
CAGCGGCGCCGCGAGCGGCG

Product: IolB protein

Products: NA

Alternate protein names: 5DG isomerase [H]

Number of amino acids: Translated: 287; Mature: 286

Protein sequence:

>287_residues
MSSHPNPNPPASLLVKAAASGRSIACVTPESARWHHVGFAAYRLAAGESLTIHEPARETCLVVMAGQVDVADQDGTRWEA
LGSRESVFDDAPPAALYLPPGRRVTVTARRATELGVASAPGTGRYPPRRIEPGQMKRSVRGTGANTRYVCDILPQTEPAE
ALLVVEVRTPSGHSSSYPPHKHDTDDVPAESFLEETYYHRVNPPQGFVFQRVYTDERDLDESMAVSDHDVVMVPRGYHPV
VVPYGYDSYYLNVMAGPTRVWHFRNDPQHDWIAKRDAAQAQAAQAQR

Sequences:

>Translated_287_residues
MSSHPNPNPPASLLVKAAASGRSIACVTPESARWHHVGFAAYRLAAGESLTIHEPARETCLVVMAGQVDVADQDGTRWEA
LGSRESVFDDAPPAALYLPPGRRVTVTARRATELGVASAPGTGRYPPRRIEPGQMKRSVRGTGANTRYVCDILPQTEPAE
ALLVVEVRTPSGHSSSYPPHKHDTDDVPAESFLEETYYHRVNPPQGFVFQRVYTDERDLDESMAVSDHDVVMVPRGYHPV
VVPYGYDSYYLNVMAGPTRVWHFRNDPQHDWIAKRDAAQAQAAQAQR
>Mature_286_residues
SSHPNPNPPASLLVKAAASGRSIACVTPESARWHHVGFAAYRLAAGESLTIHEPARETCLVVMAGQVDVADQDGTRWEAL
GSRESVFDDAPPAALYLPPGRRVTVTARRATELGVASAPGTGRYPPRRIEPGQMKRSVRGTGANTRYVCDILPQTEPAEA
LLVVEVRTPSGHSSSYPPHKHDTDDVPAESFLEETYYHRVNPPQGFVFQRVYTDERDLDESMAVSDHDVVMVPRGYHPVV
VPYGYDSYYLNVMAGPTRVWHFRNDPQHDWIAKRDAAQAQAAQAQR

Specific function: Involved in the isomerization of 5-deoxy-glucuronate (5DG) to 5-dehydro-2-deoxy-D-gluconate (DKG or 2-deoxy-5-keto-D- gluconate) [H]

COG id: COG3718

COG function: function code G; Uncharacterized enzyme involved in inositol metabolism

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the isomerase iolB family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011051
- InterPro:   IPR021120
- InterPro:   IPR014710 [H]

Pfam domain/function: PF04962 KduI [H]

EC number: NA

Molecular weight: Translated: 31635; Mature: 31503

Theoretical pI: Translated: 6.65; Mature: 6.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
2.1 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSHPNPNPPASLLVKAAASGRSIACVTPESARWHHVGFAAYRLAAGESLTIHEPARETC
CCCCCCCCCHHHHHEEECCCCCEEEEECCCCCCEEECCCEEEEEECCCEEEEECCCCCEE
LVVMAGQVDVADQDGTRWEALGSRESVFDDAPPAALYLPPGRRVTVTARRATELGVASAP
EEEEECCEEECCCCCCEEECCCCCHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCC
GTGRYPPRRIEPGQMKRSVRGTGANTRYVCDILPQTEPAEALLVVEVRTPSGHSSSYPPH
CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
KHDTDDVPAESFLEETYYHRVNPPQGFVFQRVYTDERDLDESMAVSDHDVVMVPRGYHPV
CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCCCCEEEECCCCCCE
VVPYGYDSYYLNVMAGPTRVWHFRNDPQHDWIAKRDAAQAQAAQAQR
EEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SSHPNPNPPASLLVKAAASGRSIACVTPESARWHHVGFAAYRLAAGESLTIHEPARETC
CCCCCCCCHHHHHEEECCCCCEEEEECCCCCCEEECCCEEEEEECCCEEEEECCCCCEE
LVVMAGQVDVADQDGTRWEALGSRESVFDDAPPAALYLPPGRRVTVTARRATELGVASAP
EEEEECCEEECCCCCCEEECCCCCHHHCCCCCCCEEEECCCCEEEEEECCCCCCCCCCCC
GTGRYPPRRIEPGQMKRSVRGTGANTRYVCDILPQTEPAEALLVVEVRTPSGHSSSYPPH
CCCCCCCCCCCHHHHHHHHCCCCCCCEEEEEECCCCCCCCEEEEEEEECCCCCCCCCCCC
KHDTDDVPAESFLEETYYHRVNPPQGFVFQRVYTDERDLDESMAVSDHDVVMVPRGYHPV
CCCCCCCCHHHHHHHHHHHCCCCCCCEEEEEEECCCCCCCHHHCCCCCCEEEECCCCCCE
VVPYGYDSYYLNVMAGPTRVWHFRNDPQHDWIAKRDAAQAQAAQAQR
EEECCCCCEEEEEEECCEEEEEECCCCCCCHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA