Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is iolC1 [H]

Identifier: 238027780

GI number: 238027780

Start: 2401255

End: 2403231

Strand: Direct

Name: iolC1 [H]

Synonym: bglu_1g22040

Alternate gene names: 238027780

Gene position: 2401255-2403231 (Clockwise)

Preceding gene: 238027779

Following gene: 238027781

Centisome position: 61.47

GC content: 72.38

Gene sequence:

>1977_bases
ATGTCCCATTCCCCCCTCACGTTCGCGCCGGACCGCCCGCTCGACCTGATCTGCATCGGCCGCGTGGCGGTCGACCTGTA
CGCCGAGCAGATCGGCGCGCGCCTGGAAGACGCGACCAGCTTCGCGAAGTACCTGGGCGGCTCGTCCGGCAACATCGCGT
TCGGCGCGGCGCGGCTCGGGCTCAAGTCCGCGATGCTCGCGCGCGTCGGCAACGATCACATGGGCCGCTTCGTGCGCGAG
ACGCTCGCGCGCGAAGGCTGCGACACGCGCCGCCTCATCACCGACGAGGAGCGCCTGACCGCGCTGGTGCTGCTCGGCCT
CAAGGATCGCGACACGTTTCCGCTGGTGTTCTACCGCGAGAACTGCGCCGACATGGCGCTCGACGAGACCGACATCGACG
AGGCGTTCATCGCCTCGGCCAAGGCGCTGCTGATCACCGGCACCCACTTCTCGACCGAGCGCGTCAACCGCGCGAGCCGC
CGTGCGCTCGACTTCGCGCGCCGCCACCAGGTGCGCACCGTGCTCGACATCGACTACCGGCCCGTGCTCTGGGGGCTGAC
CGGCAAGGCCGACGGCGAGACCCGCTTCGTTGCCGACGCGGGCGTGACGGCGCACCTGCAGCGCATCCTGCCGCTGTTCG
ACCTGGTGATCGGCACCGAGGAGGAATTCCGCATCGCGGGCGGCAAGGACGCGCTGCCCGATGCGCTGGAGATGGTGCGC
CGCGTGACGAGCGCGACCCTGGTGGTCAAGCGCGGCCCGCTCGGCTGCTCGATCATCGAGGGCGCGGTGCCGAACACGCT
CGACGCGCTCGAGCTGGTGGGCGGCGTGGAGGTGGACGTGCTCAACGTGCTCGGCGCCGGCGACGCGTTCGCCTCGGGCC
TGCTCTCGCAGTGGCTGCGCGGCGCCCCGCTGGAGGCCGCCGCGCGTATCGCGAACGCCTGCGGGGCGCTGGTGGTGTCG
CGCCACGGCTGCTCGCCGGCAATGCCGACGCCGGCCGAACTCGAGCATTTCCTGCGCGAGGCCGAGCGCGATCCGCTGCG
CATGCGCCGCCCCGACCGCGACGCGACGCTCGCGCGGCTGCACCGCGTGAGCCCGCCGCGGCGCGCGTGGGAGCAGGTGC
TCGGCTTCGCCTTCGACCACCGCAACCAGTTCTTCGAACTCGCGCAGCAGACCGGCGCGCCGATCGAGCGGATCGATCAC
CTCAAGCGCCTGTTCGTCGAGGCCGTCGCGCAGACCGAGGCGCAGCTCGGGCTGCAAGGCCGGATCGGCGTGCTGATCGA
CGATCGCTACGGCCAGGACGCGCTCAACGAGGCGACCGGCCGCGGCTGGTGGATCGGCCGGCCGGTGGAGCTGCCCGGCT
CGCTGCCGCTCGAATTCGACCACGGCCGCTCGCTCGGCACCACGCTCGAGACCTGGCCCGCCGAGCACGTCGCGAAGTGC
CTGGTGCGCTATCACCCCGACGAGGCCTTCCAGACGCGGCTCGAACAGGAAACGCAGCTGCGCACGCTGTACGACGCGGT
GCAGGCGAGCGGCCACGAGCTGCTGCTCGAGGTGATCCCGCCGCATCGCCCGGACCTGCCCGCCGGCGCCGACATCGTCT
ATCGCGCGCTCAAGCGGCTCTACAACCTCGGCATCCGGCCGGAATGGTGGAAGCTCGAACCGCTCGACGCGAGCCAGTGG
CGCATGGTGGACGAGCTGATCGCCGAGCGCGATCCGTATTGCCGCGGCGTGGTGCTGCTGGGCCTGTCGGCACCGGCCGA
GCAGCTGATCGACGGCTTCACCGCCGCGGCCGCCTCGCGCACCTGCCGCGGCTTCACGGTGGGCCGCACCATCTTCCACG
AGCCCAGCCGCGCCTGGCTGGCCGGCGAGCTCGACGACGCCGGCCTGATCGCGCGCGTGCGCGCCACCTTCGAGACGCTG
ATCGACGCCTGGCGCACGGCGCGCGCCGGCCGCGTCGCCGCGCGCCGGGTCGCATGA

Upstream 100 bases:

>100_bases
GAAGGACGAGGTGCTCGACATGATGGCGGGCGGCGCGGAAATGCAGAAGATGGTCGCCGAGCTAGACGGCGCGGTGCTCT
AACTCCCGACAGGAACCGAC

Downstream 100 bases:

>100_bases
GGAGCCCCCCGATGAACCATCGACAGATCGAAGCCGGCCTCGCGCCGGCCGGTGCCGCGACGGGCGGCACCGTGCGCCTG
ACCACCGCGCAGGCGCTGGT

Product: IolC protein

Products: NA

Alternate protein names: 2-deoxy-5-keto-D-gluconate kinase 1; DKG kinase 1 [H]

Number of amino acids: Translated: 658; Mature: 657

Protein sequence:

>658_residues
MSHSPLTFAPDRPLDLICIGRVAVDLYAEQIGARLEDATSFAKYLGGSSGNIAFGAARLGLKSAMLARVGNDHMGRFVRE
TLAREGCDTRRLITDEERLTALVLLGLKDRDTFPLVFYRENCADMALDETDIDEAFIASAKALLITGTHFSTERVNRASR
RALDFARRHQVRTVLDIDYRPVLWGLTGKADGETRFVADAGVTAHLQRILPLFDLVIGTEEEFRIAGGKDALPDALEMVR
RVTSATLVVKRGPLGCSIIEGAVPNTLDALELVGGVEVDVLNVLGAGDAFASGLLSQWLRGAPLEAAARIANACGALVVS
RHGCSPAMPTPAELEHFLREAERDPLRMRRPDRDATLARLHRVSPPRRAWEQVLGFAFDHRNQFFELAQQTGAPIERIDH
LKRLFVEAVAQTEAQLGLQGRIGVLIDDRYGQDALNEATGRGWWIGRPVELPGSLPLEFDHGRSLGTTLETWPAEHVAKC
LVRYHPDEAFQTRLEQETQLRTLYDAVQASGHELLLEVIPPHRPDLPAGADIVYRALKRLYNLGIRPEWWKLEPLDASQW
RMVDELIAERDPYCRGVVLLGLSAPAEQLIDGFTAAAASRTCRGFTVGRTIFHEPSRAWLAGELDDAGLIARVRATFETL
IDAWRTARAGRVAARRVA

Sequences:

>Translated_658_residues
MSHSPLTFAPDRPLDLICIGRVAVDLYAEQIGARLEDATSFAKYLGGSSGNIAFGAARLGLKSAMLARVGNDHMGRFVRE
TLAREGCDTRRLITDEERLTALVLLGLKDRDTFPLVFYRENCADMALDETDIDEAFIASAKALLITGTHFSTERVNRASR
RALDFARRHQVRTVLDIDYRPVLWGLTGKADGETRFVADAGVTAHLQRILPLFDLVIGTEEEFRIAGGKDALPDALEMVR
RVTSATLVVKRGPLGCSIIEGAVPNTLDALELVGGVEVDVLNVLGAGDAFASGLLSQWLRGAPLEAAARIANACGALVVS
RHGCSPAMPTPAELEHFLREAERDPLRMRRPDRDATLARLHRVSPPRRAWEQVLGFAFDHRNQFFELAQQTGAPIERIDH
LKRLFVEAVAQTEAQLGLQGRIGVLIDDRYGQDALNEATGRGWWIGRPVELPGSLPLEFDHGRSLGTTLETWPAEHVAKC
LVRYHPDEAFQTRLEQETQLRTLYDAVQASGHELLLEVIPPHRPDLPAGADIVYRALKRLYNLGIRPEWWKLEPLDASQW
RMVDELIAERDPYCRGVVLLGLSAPAEQLIDGFTAAAASRTCRGFTVGRTIFHEPSRAWLAGELDDAGLIARVRATFETL
IDAWRTARAGRVAARRVA
>Mature_657_residues
SHSPLTFAPDRPLDLICIGRVAVDLYAEQIGARLEDATSFAKYLGGSSGNIAFGAARLGLKSAMLARVGNDHMGRFVRET
LAREGCDTRRLITDEERLTALVLLGLKDRDTFPLVFYRENCADMALDETDIDEAFIASAKALLITGTHFSTERVNRASRR
ALDFARRHQVRTVLDIDYRPVLWGLTGKADGETRFVADAGVTAHLQRILPLFDLVIGTEEEFRIAGGKDALPDALEMVRR
VTSATLVVKRGPLGCSIIEGAVPNTLDALELVGGVEVDVLNVLGAGDAFASGLLSQWLRGAPLEAAARIANACGALVVSR
HGCSPAMPTPAELEHFLREAERDPLRMRRPDRDATLARLHRVSPPRRAWEQVLGFAFDHRNQFFELAQQTGAPIERIDHL
KRLFVEAVAQTEAQLGLQGRIGVLIDDRYGQDALNEATGRGWWIGRPVELPGSLPLEFDHGRSLGTTLETWPAEHVAKCL
VRYHPDEAFQTRLEQETQLRTLYDAVQASGHELLLEVIPPHRPDLPAGADIVYRALKRLYNLGIRPEWWKLEPLDASQWR
MVDELIAERDPYCRGVVLLGLSAPAEQLIDGFTAAAASRTCRGFTVGRTIFHEPSRAWLAGELDDAGLIARVRATFETLI
DAWRTARAGRVAARRVA

Specific function: Catalyzes the phosphorylation of 5-dehydro-2-deoxy-D- gluconate (2-deoxy-5-keto-D-gluconate or DKG) to 6-phospho-5- dehydro-2-deoxy-D-gluconate (DKGP) [H]

COG id: COG0524

COG function: function code G; Sugar kinases, ribokinase family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the carbohydrate kinase pfkB family [H]

Homologues:

Organism=Escherichia coli, GI87081971, Length=334, Percent_Identity=26.6467065868263, Blast_Score=86, Evalue=1e-17,
Organism=Caenorhabditis elegans, GI17532905, Length=285, Percent_Identity=26.3157894736842, Blast_Score=73, Evalue=6e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR011611
- InterPro:   IPR002173
- InterPro:   IPR022841 [H]

Pfam domain/function: PF00294 PfkB [H]

EC number: =2.7.1.92 [H]

Molecular weight: Translated: 72673; Mature: 72542

Theoretical pI: Translated: 6.32; Mature: 6.32

Prosite motif: PS00584 PFKB_KINASES_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.2 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.1 %Met     (Mature Protein)
2.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSHSPLTFAPDRPLDLICIGRVAVDLYAEQIGARLEDATSFAKYLGGSSGNIAFGAARLG
CCCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHH
LKSAMLARVGNDHMGRFVRETLAREGCDTRRLITDEERLTALVLLGLKDRDTFPLVFYRE
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEEEEC
NCADMALDETDIDEAFIASAKALLITGTHFSTERVNRASRRALDFARRHQVRTVLDIDYR
CCHHHCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PVLWGLTGKADGETRFVADAGVTAHLQRILPLFDLVIGTEEEFRIAGGKDALPDALEMVR
CEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHH
RVTSATLVVKRGPLGCSIIEGAVPNTLDALELVGGVEVDVLNVLGAGDAFASGLLSQWLR
HHHHHEEEEECCCCCCHHHCCCCCCHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHC
GAPLEAAARIANACGALVVSRHGCSPAMPTPAELEHFLREAERDPLRMRRPDRDATLARL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHH
HRVSPPRRAWEQVLGFAFDHRNQFFELAQQTGAPIERIDHLKRLFVEAVAQTEAQLGLQG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RIGVLIDDRYGQDALNEATGRGWWIGRPVELPGSLPLEFDHGRSLGTTLETWPAEHVAKC
CEEEEEECCCCCHHHHHCCCCCEECCCCCCCCCCCCCEECCCCCCCCCHHHCCHHHHHHH
LVRYHPDEAFQTRLEQETQLRTLYDAVQASGHELLLEVIPPHRPDLPAGADIVYRALKRL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
YNLGIRPEWWKLEPLDASQWRMVDELIAERDPYCRGVVLLGLSAPAEQLIDGFTAAAASR
HHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
TCRGFTVGRTIFHEPSRAWLAGELDDAGLIARVRATFETLIDAWRTARAGRVAARRVA
CCCCEECCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
SHSPLTFAPDRPLDLICIGRVAVDLYAEQIGARLEDATSFAKYLGGSSGNIAFGAARLG
CCCCCCCCCCCCCCEEEHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCEEEHHHHHH
LKSAMLARVGNDHMGRFVRETLAREGCDTRRLITDEERLTALVLLGLKDRDTFPLVFYRE
HHHHHHHHHCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHEEEEEEECCCCCCCCEEEEEC
NCADMALDETDIDEAFIASAKALLITGTHFSTERVNRASRRALDFARRHQVRTVLDIDYR
CCHHHCCCCCCCHHHHHHCCCEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHEECCCC
PVLWGLTGKADGETRFVADAGVTAHLQRILPLFDLVIGTEEEFRIAGGKDALPDALEMVR
CEEEECCCCCCCCEEEEECCCHHHHHHHHHHHHHHHHCCCHHEEECCCCCCCHHHHHHHH
RVTSATLVVKRGPLGCSIIEGAVPNTLDALELVGGVEVDVLNVLGAGDAFASGLLSQWLR
HHHHHEEEEECCCCCCHHHCCCCCCHHHHHHHHCCCCEEHHHHHCCCHHHHHHHHHHHHC
GAPLEAAARIANACGALVVSRHGCSPAMPTPAELEHFLREAERDPLRMRRPDRDATLARL
CCCHHHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCCHHCCCCCCHHHHHHH
HRVSPPRRAWEQVLGFAFDHRNQFFELAQQTGAPIERIDHLKRLFVEAVAQTEAQLGLQG
HHCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC
RIGVLIDDRYGQDALNEATGRGWWIGRPVELPGSLPLEFDHGRSLGTTLETWPAEHVAKC
CEEEEEECCCCCHHHHHCCCCCEECCCCCCCCCCCCCEECCCCCCCCCHHHCCHHHHHHH
LVRYHPDEAFQTRLEQETQLRTLYDAVQASGHELLLEVIPPHRPDLPAGADIVYRALKRL
HHHCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCCCCCCCCHHHHHHHHHHH
YNLGIRPEWWKLEPLDASQWRMVDELIAERDPYCRGVVLLGLSAPAEQLIDGFTAAAASR
HHCCCCCCCEEECCCCHHHHHHHHHHHHCCCCCCCEEEEEECCCCHHHHHHHHHHHHHHH
TCRGFTVGRTIFHEPSRAWLAGELDDAGLIARVRATFETLIDAWRTARAGRVAARRVA
CCCCEECCHHHHCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: NA