| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027708
Identifier: 238027708
GI number: 238027708
Start: 2314747
End: 2316459
Strand: Direct
Name: 238027708
Synonym: bglu_1g21290
Alternate gene names: NA
Gene position: 2314747-2316459 (Clockwise)
Preceding gene: 238027707
Following gene: 238027709
Centisome position: 59.25
GC content: 63.34
Gene sequence:
>1713_bases GTGACGTTCTCGACGCCCCTCGCGTTCGCTTCCGGTGGCACCGGCGCCACGACGGCGCTCGGCGCCACCAGCAATCTGCA GTTTCAGGCGTCGCTGTCCGGCGCCGGCGGCCGCTCTGTCTCGAGCAAGCTGAGCGACGTCGTCAGCATCCTAGATTTTC CGGGCTGCGATAAAACGGGGGTCGCCGACAGCACCGGTTGCATCCAGGCCGCGCTGAACTCGGGCGCGCGCACGGTCTAC GTCCCGGCGGGCCAGTATCGCGAAAGCGGCCTCACGCTGCCGCAGACGCAGGGCTTCACGCTCTACGGCGACGGCCCGAA CAGCGTCCTGATCCAGACGGGCGGCTCGATCAGCTATCCGGCGATCGCGGGGGCCTTCACGTTCGACTCGCATTCGACGA TTCGCGACCTGAAGTTCGACGGCACCGCCGGCACCGCGAACACGCTCGATACCACGTTCGCGCAGACGCTCGACCTGCTG AACCTGGCGTTCAACAACGTCCCGGTCGGCTACTCGTCGATCAAGATCGACGGCAACCCGACGACGGGCGTCTACATGCA CGACGTGCGGCTGAAGAACATCCGCATCTACTCGACGACGGCGGGCAAGGCCGGGATCGAACTGGGGGCATTCGCGTCCG ACTCGACGATCGACGGCTTCATCATGAACGGCGGGTTCGTCGTGAACTACTGCATCTACGCCAACCCTGGCGCGCAGACA ACGATGGTGCAGAACTCGCACCCGTACAACGCCGCGATCAACGTCGTCCGGCTGGCCGGCAACAACAACGATTTCGGGTT CGTCGGCGACACGATCGACAACGCGCTCGGCGATGTCTTCTACATCAAGAACTCCACGCACACGCGCATCTCATCGACTT GGATCGAGTCGATCAACAGCTTTCAGCGCGGACTCGTGCTGGATGGCTCGTCGAACAACATTGCGATGGGGCTCGGCTGC CAGACCTACGGTGTGACGAATGCGACGTCATGTGTTGCTGAGATCAATGGCGCCGCGGGCAACAAGATATTCGGGGCTCA GCTCGACAGCGCATCGAACTACGCAACGCCCTTCAACTTGACCGGCGCCGGCAGCCTGTATCAAGCCACGAACAGCGGAA ACTCGCTGAATACGATGAGCGTGGCGGCAGGCGGTTCGCCATCGCTGAGCGCGTCCGGAACGGATAGCTCGATCCCAATC ACGTTGAACCCGAAGGGCAACGGTGGCGTGGTCCTGAACTTCAGCAACTCGATCACCGCAGCGTACTACTCGGACACGGC TGGTGAGCTGGCGCTCGAGGTCTACAACGGATCGACGCCCACCACGAAATACAACCTGAATCTCGTGAAGTACGGAGGGC GCTTGCTGCTTGGCGGCGCCGACGACGGCACGAACAAACTGCAGGTCGGTGGCTCTGCGGCCGTCTACGGGAACCTGACT GTAACCGGCGCCGGCGCGATGCCGCTCTACTCGACGTCTGGCACGGCTGCCAGCGCGCCGCACATGGTGAAGGGTTCGGT GACGCTGGCAAGCGGCTCAGCAACGATCACGCTCACCGGCGCCGCGGCGTTCTCGTCGTCCTCGAGCTACGTCTGTACGG CGATTGATACGACTGCATCGAATGCCGTTCGCGTGTCGCAGACATCCGGCACGTCGTTCTCGCTTAGTGGCACTGGTACC GACACGGCGCAGTTCCTCTGCGCCGGCAACTAG
Upstream 100 bases:
>100_bases CGTCCTATCTGTCACCGGCGGCACGCTGACAGGGCCGCTACAGGGCACAGCAGCGACATTCAACTCGGGTAGCTTCGCGA GCCTATCAAGCAGCGGCCCG
Downstream 100 bases:
>100_bases CAATGACCACCGGCGGGGGAAAGATGCGAGAGCCGACGCGCTATGAGGAACTGCCCGAAACCAAGGGCGGCGACTTTCGC GCCCTCGTCGTCGCCGTGGA
Product: outer membrane autotransporter
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 570; Mature: 569
Protein sequence:
>570_residues MTFSTPLAFASGGTGATTALGATSNLQFQASLSGAGGRSVSSKLSDVVSILDFPGCDKTGVADSTGCIQAALNSGARTVY VPAGQYRESGLTLPQTQGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFAQTLDLL NLAFNNVPVGYSSIKIDGNPTTGVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYANPGAQT TMVQNSHPYNAAINVVRLAGNNNDFGFVGDTIDNALGDVFYIKNSTHTRISSTWIESINSFQRGLVLDGSSNNIAMGLGC QTYGVTNATSCVAEINGAAGNKIFGAQLDSASNYATPFNLTGAGSLYQATNSGNSLNTMSVAAGGSPSLSASGTDSSIPI TLNPKGNGGVVLNFSNSITAAYYSDTAGELALEVYNGSTPTTKYNLNLVKYGGRLLLGGADDGTNKLQVGGSAAVYGNLT VTGAGAMPLYSTSGTAASAPHMVKGSVTLASGSATITLTGAAAFSSSSSYVCTAIDTTASNAVRVSQTSGTSFSLSGTGT DTAQFLCAGN
Sequences:
>Translated_570_residues MTFSTPLAFASGGTGATTALGATSNLQFQASLSGAGGRSVSSKLSDVVSILDFPGCDKTGVADSTGCIQAALNSGARTVY VPAGQYRESGLTLPQTQGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFAQTLDLL NLAFNNVPVGYSSIKIDGNPTTGVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYANPGAQT TMVQNSHPYNAAINVVRLAGNNNDFGFVGDTIDNALGDVFYIKNSTHTRISSTWIESINSFQRGLVLDGSSNNIAMGLGC QTYGVTNATSCVAEINGAAGNKIFGAQLDSASNYATPFNLTGAGSLYQATNSGNSLNTMSVAAGGSPSLSASGTDSSIPI TLNPKGNGGVVLNFSNSITAAYYSDTAGELALEVYNGSTPTTKYNLNLVKYGGRLLLGGADDGTNKLQVGGSAAVYGNLT VTGAGAMPLYSTSGTAASAPHMVKGSVTLASGSATITLTGAAAFSSSSSYVCTAIDTTASNAVRVSQTSGTSFSLSGTGT DTAQFLCAGN >Mature_569_residues TFSTPLAFASGGTGATTALGATSNLQFQASLSGAGGRSVSSKLSDVVSILDFPGCDKTGVADSTGCIQAALNSGARTVYV PAGQYRESGLTLPQTQGFTLYGDGPNSVLIQTGGSISYPAIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFAQTLDLLN LAFNNVPVGYSSIKIDGNPTTGVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYANPGAQTT MVQNSHPYNAAINVVRLAGNNNDFGFVGDTIDNALGDVFYIKNSTHTRISSTWIESINSFQRGLVLDGSSNNIAMGLGCQ TYGVTNATSCVAEINGAAGNKIFGAQLDSASNYATPFNLTGAGSLYQATNSGNSLNTMSVAAGGSPSLSASGTDSSIPIT LNPKGNGGVVLNFSNSITAAYYSDTAGELALEVYNGSTPTTKYNLNLVKYGGRLLLGGADDGTNKLQVGGSAAVYGNLTV TGAGAMPLYSTSGTAASAPHMVKGSVTLASGSATITLTGAAAFSSSSSYVCTAIDTTASNAVRVSQTSGTSFSLSGTGTD TAQFLCAGN
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 57814; Mature: 57683
Theoretical pI: Translated: 4.92; Mature: 4.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 2.6 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.2 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTFSTPLAFASGGTGATTALGATSNLQFQASLSGAGGRSVSSKLSDVVSILDFPGCDKTG CCCCCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC VADSTGCIQAALNSGARTVYVPAGQYRESGLTLPQTQGFTLYGDGPNSVLIQTGGSISYP CCCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCC AIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFAQTLDLLNLAFNNVPVGYSSIKIDGNP EEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TTGVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYANPGAQT CCCEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEEECCCCCE TMVQNSHPYNAAINVVRLAGNNNDFGFVGDTIDNALGDVFYIKNSTHTRISSTWIESINS EEEECCCCCCEEEEEEEEECCCCCCEEECCHHHHCCCCEEEEECCCCCEEHHHHHHHHHH FQRGLVLDGSSNNIAMGLGCQTYGVTNATSCVAEINGAAGNKIFGAQLDSASNYATPFNL HHCCEEEECCCCCEEEEECCEECCCCCHHHHHEECCCCCCCEEEEEECCCCCCCCCCEEE TGAGSLYQATNSGNSLNTMSVAAGGSPSLSASGTDSSIPITLNPKGNGGVVLNFSNSITA CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEE AYYSDTAGELALEVYNGSTPTTKYNLNLVKYGGRLLLGGADDGTNKLQVGGSAAVYGNLT EEECCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEECCCCCCCEEEECCCEEEEEEEE VTGAGAMPLYSTSGTAASAPHMVKGSVTLASGSATITLTGAAAFSSSSSYVCTAIDTTAS EECCCCCEEEECCCCCCCCCCEEECEEEEECCCEEEEEEEEEEECCCCCEEEEEEECCCC NAVRVSQTSGTSFSLSGTGTDTAQFLCAGN CEEEEEECCCCEEEEECCCCCCEEEEEECC >Mature Secondary Structure TFSTPLAFASGGTGATTALGATSNLQFQASLSGAGGRSVSSKLSDVVSILDFPGCDKTG CCCCCEEEECCCCCCEEEECCCCCEEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCC VADSTGCIQAALNSGARTVYVPAGQYRESGLTLPQTQGFTLYGDGPNSVLIQTGGSISYP CCCCCHHHHHHHCCCCEEEEECCCCHHHCCCCCCCCCCEEEECCCCCEEEEEECCCCCCC AIAGAFTFDSHSTIRDLKFDGTAGTANTLDTTFAQTLDLLNLAFNNVPVGYSSIKIDGNP EEEEEEEECCCCCEEEEEECCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCC TTGVYMHDVRLKNIRIYSTTAGKAGIELGAFASDSTIDGFIMNGGFVVNYCIYANPGAQT CCCEEEEEEEEEEEEEEEECCCCCCEEEEEECCCCCCCEEEECCCEEEEEEEEECCCCCE TMVQNSHPYNAAINVVRLAGNNNDFGFVGDTIDNALGDVFYIKNSTHTRISSTWIESINS EEEECCCCCCEEEEEEEEECCCCCCEEECCHHHHCCCCEEEEECCCCCEEHHHHHHHHHH FQRGLVLDGSSNNIAMGLGCQTYGVTNATSCVAEINGAAGNKIFGAQLDSASNYATPFNL HHCCEEEECCCCCEEEEECCEECCCCCHHHHHEECCCCCCCEEEEEECCCCCCCCCCEEE TGAGSLYQATNSGNSLNTMSVAAGGSPSLSASGTDSSIPITLNPKGNGGVVLNFSNSITA CCCCCEEEECCCCCCEEEEEEECCCCCCCCCCCCCCEEEEEECCCCCCCEEEEECCCEEE AYYSDTAGELALEVYNGSTPTTKYNLNLVKYGGRLLLGGADDGTNKLQVGGSAAVYGNLT EEECCCCCEEEEEEECCCCCCEEEEEEEEEECCEEEEECCCCCCCEEEECCCEEEEEEEE VTGAGAMPLYSTSGTAASAPHMVKGSVTLASGSATITLTGAAAFSSSSSYVCTAIDTTAS EECCCCCEEEECCCCCCCCCCEEECEEEEECCCEEEEEEEEEEECCCCCEEEEEEECCCC NAVRVSQTSGTSFSLSGTGTDTAQFLCAGN CEEEEEECCCCEEEEECCCCCCEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA