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The map label for this gene is arrD [H]

Identifier: 238027709

GI number: 238027709

Start: 2317102

End: 2317872

Strand: Direct

Name: arrD [H]

Synonym: bglu_1g21300

Alternate gene names: 238027709

Gene position: 2317102-2317872 (Clockwise)

Preceding gene: 238027708

Following gene: 238027710

Centisome position: 59.31

GC content: 72.37

Gene sequence:

>771_bases
ATGAACGCCCTCTCCGCGCTGCTCGACGCTATCCGAGCGCTGTTCGCGCGCGCGCCAGTGCCGGTGCCGGCCGCGAGCCC
GAATGCGGCCGTGCCGCCCGCGTCGCCGATGCAAGCACAACAGCCGGAAACCCACGCCCAGCAAGGCGGGCGAGCGCCGC
TGGGGCCGGCCGAAAACGACTGGCTCACGCTTTGCCGCCCGCTGTCGCAGCACTTCGAGAGCTGCTACCTGACCGCGTAC
CCCGATCCAGCCTCGCCGCTCGGCAAAGCGCTCCAGGCGCGCGGCATTTGGTATCGAGTGCTGGGCGGCATGCCGATCCC
GGCCGACCCGGCGCTGCGCGCGCTCTCTGGCGCGCCGTGGACGTGCGGCTGGGGCTCGACCGGGCCGGACGTGCGTGAGG
GCACGACGTGGACGCAGGCGACTGCCGACGCGCGCCACGACGCGAACCTCCAGGCCGCGGCCGCGCTTGTCGATCGTGCC
GTCACTGTGGTGCTGGCGCCGCACGAAAAGGCCGCCATGGTCAGCATCGTGAACAACGTAGGGCCGGGCCGGGCGCGCGC
GGCCGGCGACCCGGGACGCGACGGTATCGTGACGCTGGCGAGCGGCGCCCCGTCGACACTACTGCGCATGCTCAACGCAG
GCGCGCGCCTGGCGGCCGCCGATCAGTTCCTCGTCTGGAATCGCGCTGGCGGCGTCGTCAGCGACGGCCTGAAGCGGCGG
CGGGCAGCCGAACGAGAGCTTTTCCTCACCGGCCAATGGAGCCGATCATGA

Upstream 100 bases:

>100_bases
TGTTCGGCGCGCTGACCGCGCTGATCGCCGTGTCCGGCATCGTTGGCCGCATCGTCAAGCAAGACCCAGGCGACGCGGCC
CGCATTGCGGACCTGAAGCA

Downstream 100 bases:

>100_bases
GCGCTATCGCGACCCTGCTTTCCATCCTGAACGGAGCCTGGGCGCTGCTCTCCAAGCTGTTCGGGAAAAAGCCGGCGCCC
GACGAAAACACGCAGGCTGT

Product: phage lysozyme

Products: NA

Alternate protein names: Endolysin; Lysis protein; Muramidase [H]

Number of amino acids: Translated: 256; Mature: 256

Protein sequence:

>256_residues
MNALSALLDAIRALFARAPVPVPAASPNAAVPPASPMQAQQPETHAQQGGRAPLGPAENDWLTLCRPLSQHFESCYLTAY
PDPASPLGKALQARGIWYRVLGGMPIPADPALRALSGAPWTCGWGSTGPDVREGTTWTQATADARHDANLQAAAALVDRA
VTVVLAPHEKAAMVSIVNNVGPGRARAAGDPGRDGIVTLASGAPSTLLRMLNAGARLAAADQFLVWNRAGGVVSDGLKRR
RAAERELFLTGQWSRS

Sequences:

>Translated_256_residues
MNALSALLDAIRALFARAPVPVPAASPNAAVPPASPMQAQQPETHAQQGGRAPLGPAENDWLTLCRPLSQHFESCYLTAY
PDPASPLGKALQARGIWYRVLGGMPIPADPALRALSGAPWTCGWGSTGPDVREGTTWTQATADARHDANLQAAAALVDRA
VTVVLAPHEKAAMVSIVNNVGPGRARAAGDPGRDGIVTLASGAPSTLLRMLNAGARLAAADQFLVWNRAGGVVSDGLKRR
RAAERELFLTGQWSRS
>Mature_256_residues
MNALSALLDAIRALFARAPVPVPAASPNAAVPPASPMQAQQPETHAQQGGRAPLGPAENDWLTLCRPLSQHFESCYLTAY
PDPASPLGKALQARGIWYRVLGGMPIPADPALRALSGAPWTCGWGSTGPDVREGTTWTQATADARHDANLQAAAALVDRA
VTVVLAPHEKAAMVSIVNNVGPGRARAAGDPGRDGIVTLASGAPSTLLRMLNAGARLAAADQFLVWNRAGGVVSDGLKRR
RAAERELFLTGQWSRS

Specific function: Essential for lysis of bacterial cell wall, by showing cell wall hydrolyzing activity [H]

COG id: COG3772

COG function: function code R; Phage-related lysozyme (muraminidase)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyl hydrolase 24 family [H]

Homologues:

Organism=Escherichia coli, GI1786768, Length=133, Percent_Identity=34.5864661654135, Blast_Score=69, Evalue=4e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002196 [H]

Pfam domain/function: PF00959 Phage_lysozyme [H]

EC number: =3.2.1.17 [H]

Molecular weight: Translated: 26771; Mature: 26771

Theoretical pI: Translated: 9.76; Mature: 9.76

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
2.0 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNALSALLDAIRALFARAPVPVPAASPNAAVPPASPMQAQQPETHAQQGGRAPLGPAEND
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
WLTLCRPLSQHFESCYLTAYPDPASPLGKALQARGIWYRVLGGMPIPADPALRALSGAPW
HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCCCC
TCGWGSTGPDVREGTTWTQATADARHDANLQAAAALVDRAVTVVLAPHEKAAMVSIVNNV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHCC
GPGRARAAGDPGRDGIVTLASGAPSTLLRMLNAGARLAAADQFLVWNRAGGVVSDGLKRR
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHCCEEEEEECCCCHHHHHHHHH
RAAERELFLTGQWSRS
HHHHHEEEEECCCCCC
>Mature Secondary Structure
MNALSALLDAIRALFARAPVPVPAASPNAAVPPASPMQAQQPETHAQQGGRAPLGPAEND
CCHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCCCC
WLTLCRPLSQHFESCYLTAYPDPASPLGKALQARGIWYRVLGGMPIPADPALRALSGAPW
HHHHHHHHHHHHHHEEEEECCCCCHHHHHHHHHCCHHHHHHCCCCCCCCHHHHHHCCCCC
TCGWGSTGPDVREGTTWTQATADARHDANLQAAAALVDRAVTVVLAPHEKAAMVSIVNNV
CCCCCCCCCCCCCCCCHHHHHCCCCCCCCHHHHHHHHHHHEEEEECCCCHHHHHHHHHCC
GPGRARAAGDPGRDGIVTLASGAPSTLLRMLNAGARLAAADQFLVWNRAGGVVSDGLKRR
CCCCCCCCCCCCCCCEEEEECCCHHHHHHHHHCCCCCHHCCEEEEEECCCCHHHHHHHHH
RAAERELFLTGQWSRS
HHHHHEEEEECCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]