| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
Click here to switch to the map view.
The map label for this gene is 238027707
Identifier: 238027707
GI number: 238027707
Start: 2312835
End: 2314241
Strand: Direct
Name: 238027707
Synonym: bglu_1g21280
Alternate gene names: NA
Gene position: 2312835-2314241 (Clockwise)
Preceding gene: 238027706
Following gene: 238027708
Centisome position: 59.2
GC content: 67.38
Gene sequence:
>1407_bases ATGCAGAGCACCCAGACACCTACCCTCGTGCCACTGGCCTTTGCCGCCAACGGCACGAAGAATGCCATTCCTGAAAACTC CCAGATCGAAATCACACCGGGGGCAGCGTCGCTGAATGACGGCTTCCCGCCGCTGACGATGACACCGATCGCCGCCGGTG GAGTGCCGCCTTCTGGCGCCGACGTCAACGGTGTGCTGAACCTGATCACGCAATCGATCCGCTGGGCACACGGAGGCGGC AGCTACGCTTGGAACAGCGGCTTCGCGAACGACGCCAACGTGGCCGGCTACCCGAAAGGCTCGGTGCTGATGCGCGCCGA TCTGACGGGCTTCTGGATCAGCACCACCGAAGGAAACGCGACGAATCCCGATGCGACCGACGGCTCGGCCGCCGGATGGG TGCCCGGCTACAACTACGGCGTGACCGTGGTATCGGGCCTGACGAACGCCAATGTGACGCTCTCGCCGCTGCAGGCCGCG AAGTCACGCATTCTGGTCTCGGGCGCGCTCACCGGCAACGTCAGCATGATTTTTCCGGCCTGGACAAAGGAATGGGAGGT CGTGAACAACACGACCGGCGCGTTCTCGCTCACGGCGACCACGGCAGCGGGCACCGGCGTGACGCTGCCGGCCGGCTCGA CCATCATCACCGGCGACGGCACGAACATCGTTCAGCCGTCGCGGAACATCGCCGTGCCGCCGGCGGGCGACAGCAGCCAG AAAGGCGCAACGACCGCGTTCGTGCAGGGCTTCGCCGGTGGCCGCAAGGTGGTCATTCTCTCCGCGATGAACTGGACCGT TCCTGCCGGCGTGACGCTCATTTGGATCAGCGCGTGCGCGGCAGGCGGCGGCAGCGCGGGATCACCCAATATTCCCGCGA ACAACATCGTAGCCGGCGGCGCAGGCGGCGGGGCGGGCCAGTTCGTGCTGCGCTACCCGATGGCAGTCACACCCGGGCAA GTTCTTTCATGCGTCCCTGGCGCCGCTGGTGTCGCGGGTGCAATCGGGGGCGCCGGCGGGAACGGCAGCAACACCATCGT CGGCAGTCTCACTCTGAACGCAGGTGCGGGCGGCCAGGTCGGCAGCAGTGGAGCGCCTACGCAAGCATGGCCCGGCCAAC CAGGCGGCAACGGCTTCCCGAATGGCGAGTACGGCCAAGACACGTCTCAGTATGGGCCTGGCGCCACTGGCGGCCGAGGC GGTTGCGGCCCGTTCGGCGCGAGCGGCGCGCCGGGCCGCGGCGCAATCGGTGGTGTCGCGAGCCTGATTGCGCCGTCTGC GTCATACGGCTACGGCGTTGGCGGCTCGGGTGCGGGCGGCTGTTACGGCCCGACGACGGCATCGGGAACCACGAGCGGTA GTGTCGGCGCGGCCGGCATGCCGGGTTTGATCGTCATCGAATATTGA
Upstream 100 bases:
>100_bases TACACCGGTGTAACCAACGTGTTCTCGCCGATTGGCGCCTTTTTCCTCGACGTGAATTTCATCCTCAACCAGTCGACGCT CAACTGACTAGGGACACTCT
Downstream 100 bases:
>100_bases GGGGAACCACATGGCGCGCTACGCCTATTTCGACAAGCAAGTGAAAGCGGTACTGGGCTGGATCGACACCGTTGCGTGGG GCTACAACGAAGACCCGACC
Product: Tail fiber protein
Products: NA
Alternate protein names: Phage Tail Family
Number of amino acids: Translated: 468; Mature: 468
Protein sequence:
>468_residues MQSTQTPTLVPLAFAANGTKNAIPENSQIEITPGAASLNDGFPPLTMTPIAAGGVPPSGADVNGVLNLITQSIRWAHGGG SYAWNSGFANDANVAGYPKGSVLMRADLTGFWISTTEGNATNPDATDGSAAGWVPGYNYGVTVVSGLTNANVTLSPLQAA KSRILVSGALTGNVSMIFPAWTKEWEVVNNTTGAFSLTATTAAGTGVTLPAGSTIITGDGTNIVQPSRNIAVPPAGDSSQ KGATTAFVQGFAGGRKVVILSAMNWTVPAGVTLIWISACAAGGGSAGSPNIPANNIVAGGAGGGAGQFVLRYPMAVTPGQ VLSCVPGAAGVAGAIGGAGGNGSNTIVGSLTLNAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRG GCGPFGASGAPGRGAIGGVASLIAPSASYGYGVGGSGAGGCYGPTTASGTTSGSVGAAGMPGLIVIEY
Sequences:
>Translated_468_residues MQSTQTPTLVPLAFAANGTKNAIPENSQIEITPGAASLNDGFPPLTMTPIAAGGVPPSGADVNGVLNLITQSIRWAHGGG SYAWNSGFANDANVAGYPKGSVLMRADLTGFWISTTEGNATNPDATDGSAAGWVPGYNYGVTVVSGLTNANVTLSPLQAA KSRILVSGALTGNVSMIFPAWTKEWEVVNNTTGAFSLTATTAAGTGVTLPAGSTIITGDGTNIVQPSRNIAVPPAGDSSQ KGATTAFVQGFAGGRKVVILSAMNWTVPAGVTLIWISACAAGGGSAGSPNIPANNIVAGGAGGGAGQFVLRYPMAVTPGQ VLSCVPGAAGVAGAIGGAGGNGSNTIVGSLTLNAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRG GCGPFGASGAPGRGAIGGVASLIAPSASYGYGVGGSGAGGCYGPTTASGTTSGSVGAAGMPGLIVIEY >Mature_468_residues MQSTQTPTLVPLAFAANGTKNAIPENSQIEITPGAASLNDGFPPLTMTPIAAGGVPPSGADVNGVLNLITQSIRWAHGGG SYAWNSGFANDANVAGYPKGSVLMRADLTGFWISTTEGNATNPDATDGSAAGWVPGYNYGVTVVSGLTNANVTLSPLQAA KSRILVSGALTGNVSMIFPAWTKEWEVVNNTTGAFSLTATTAAGTGVTLPAGSTIITGDGTNIVQPSRNIAVPPAGDSSQ KGATTAFVQGFAGGRKVVILSAMNWTVPAGVTLIWISACAAGGGSAGSPNIPANNIVAGGAGGGAGQFVLRYPMAVTPGQ VLSCVPGAAGVAGAIGGAGGNGSNTIVGSLTLNAGAGGQVGSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRG GCGPFGASGAPGRGAIGGVASLIAPSASYGYGVGGSGAGGCYGPTTASGTTSGSVGAAGMPGLIVIEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 45109; Mature: 45109
Theoretical pI: Translated: 5.16; Mature: 5.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 1.5 %Met (Translated Protein) 2.4 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQSTQTPTLVPLAFAANGTKNAIPENSQIEITPGAASLNDGFPPLTMTPIAAGGVPPSGA CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCEECCCCCCCCC DVNGVLNLITQSIRWAHGGGSYAWNSGFANDANVAGYPKGSVLMRADLTGFWISTTEGNA CHHHHHHHHHHHHEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC TNPDATDGSAAGWVPGYNYGVTVVSGLTNANVTLSPLQAAKSRILVSGALTGNVSMIFPA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECHHHHCCCEEEEEEEEECCEEEEEEC WTKEWEVVNNTTGAFSLTATTAAGTGVTLPAGSTIITGDGTNIVQPSRNIAVPPAGDSSQ CCCCEEEECCCCCEEEEEEEECCCCCEEECCCCEEEECCCCCEECCCCCEECCCCCCCCC KGATTAFVQGFAGGRKVVILSAMNWTVPAGVTLIWISACAAGGGSAGSPNIPANNIVAGG CCCCEEHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCEEECC AGGGAGQFVLRYPMAVTPGQVLSCVPGAAGVAGAIGGAGGNGSNTIVGSLTLNAGAGGQV CCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCC GSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGCGPFGASGAPGRGAIGGVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SLIAPSASYGYGVGGSGAGGCYGPTTASGTTSGSVGAAGMPGLIVIEY HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure MQSTQTPTLVPLAFAANGTKNAIPENSQIEITPGAASLNDGFPPLTMTPIAAGGVPPSGA CCCCCCCEEEEEEEECCCCCCCCCCCCEEEEECCCCCCCCCCCCCEECCEECCCCCCCCC DVNGVLNLITQSIRWAHGGGSYAWNSGFANDANVAGYPKGSVLMRADLTGFWISTTEGNA CHHHHHHHHHHHHEEECCCCCCEECCCCCCCCCCCCCCCCCEEEEECCCEEEEECCCCCC TNPDATDGSAAGWVPGYNYGVTVVSGLTNANVTLSPLQAAKSRILVSGALTGNVSMIFPA CCCCCCCCCCCCCCCCCCCCEEEEECCCCCCEEECHHHHCCCEEEEEEEEECCEEEEEEC WTKEWEVVNNTTGAFSLTATTAAGTGVTLPAGSTIITGDGTNIVQPSRNIAVPPAGDSSQ CCCCEEEECCCCCEEEEEEEECCCCCEEECCCCEEEECCCCCEECCCCCEECCCCCCCCC KGATTAFVQGFAGGRKVVILSAMNWTVPAGVTLIWISACAAGGGSAGSPNIPANNIVAGG CCCCEEHHHHCCCCCEEEEEEECCCCCCCCEEEEEEEHHCCCCCCCCCCCCCCCCEEECC AGGGAGQFVLRYPMAVTPGQVLSCVPGAAGVAGAIGGAGGNGSNTIVGSLTLNAGAGGQV CCCCCCCEEEECCCCCCCCHHHHHCCCCCCHHHCCCCCCCCCCCEEEEEEEEECCCCCCC GSSGAPTQAWPGQPGGNGFPNGEYGQDTSQYGPGATGGRGGCGPFGASGAPGRGAIGGVA CCCCCCCCCCCCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCHHHHH SLIAPSASYGYGVGGSGAGGCYGPTTASGTTSGSVGAAGMPGLIVIEY HHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA