| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cobJ [H]
Identifier: 238027443
GI number: 238027443
Start: 2019543
End: 2021456
Strand: Direct
Name: cobJ [H]
Synonym: bglu_1g18460
Alternate gene names: 238027443
Gene position: 2019543-2021456 (Clockwise)
Preceding gene: 238027442
Following gene: 238027444
Centisome position: 51.7
GC content: 76.75
Gene sequence:
>1914_bases ATGGCAAGGCTGAACGTCGCGCCGGCGATCGTCGTGCTCGGCGCCGGCGCGCTGCCGGTGGCCGAGCGGATTCGCGCGCG CTACGCGGGCGCCACCCTCCACGCGCTCGCGGGCCGCGCGCAAGGCGACCTGGCGTTCACCGAACTCGGCGCGCATCTGC GCGAACTGTACGCACGCGGCACGCCGATCGTCGCGCTGTGCGCGGCCGGCATCGTGATCCGCTGCGTCGCGCCGTGCCTC GCCGACAAGGGCATCGAGCCGCCGGTGCTGGCGGTGGCCGAGGACGGCAGCGCGGTCGTGCCGCTGCTGGGCGGGCTGAC CGGCGCGAACCTGTTCGCGCGCGAGATCGCCGCGCTGCTCGCGGTGGCGCCCGCCATCACCACCAGCGGCGAGCTGCGGT TCGGCGCCTGCGTGCTGAACCCGCCCGACGGCTATGCGCTGGCCGACCTCGGCGCCGGCAAGCGCTTCGTGTCGGACCTG CTGGCGGGCGCCGGCACGCGCGTGGACGGCGAGGCGCCGTGGCTCGACGGCGTCGCGCTGCCGCTCGACCCGGGCGCCTC GCATGCGATCCGCATCACGCCGCGCACGGCCGGCGGCGGCGCCGGCGAACTCGTGATCCACCCGCGCAGCGTGGTGGTGG CGCTGTTGCCCGAGGCGCACCCCGGCTCGGCGCGGCCGCTGCCCGCGCCGAGCGCGGATGCCGCCCTCGAGACGCGCGCC GATCCGCTCGCGGCCCGCGTGCTCGACGCGCTGGCCGCGGCCGGGCTCGCCCCGCTCGCGCTCGCGGCGCTCGTCGCGCC GCGCCGGGCGATGCGCGACGCCACGCTCGCACGCGCCGCCCGCGCGCTCGGCGTGCCGCTGCGTTTCGTGGCGGCTGCCA CTGCCGAAGACCATCTCGAACGCGGTGCCGATGCCGGCGCGCTGCTCGACGCGGCGCTCGCGGCGGCCGCGATCGCCGCG ACCCGCCTGCCCGCCGCTTCCGCCGCTTCCGGCGATCAAGCCGATTCGGCCGATCACGACGCGGCGCGCGCGATGCCAAT CGCGATCGCGGTGGCCAACGCGCCCGTCGACGCCGACGCGCTCGGCCAGGCGCGCGGCAGCCTGACCGTGCTCGGCCTCG GCCCCGGCAGCGCCGAACTGCTGGCACCGGCCGCGCGCGCCGCGCTCGCCGCGGCCACCGACATCCTCGGCTACGCAACC TACGTGCGCATGGCAGGCCCGTTCCGCGCCGATCAACGCGTCCACGAAACCGACAATCGCGAGGAATTGCAGCGCGCGCG GCACGCGTTCGAACTGGCCGCGCGGGGGCGCCGCGTGGCGGTGGTGTCGTCGGGCGATCCGGGCGTGTTCGCAATGGCTG CCGCGGTGCTGGAGGCGCTCGACGGCAGCGACGACGCGGCCTGGGCCGACGTCGCGCTCGATGTGGTGCCCGGCGTGTCG GCCGCGCTGGCCACCGCCGCGCAGGCCGGCGCGCCGCTCGGCCATGATTTCTGCGTGATCTCGCTGTCGGACAACCTGAA GCCGTGGAGCGTGATCGAGGAGCGGCTCGCGCTCGCCGCGCGCGCCGACCTGGTGATGGCGTTCTACAACCCGGTGTCGC GCGCCCGTCCGTGGCAGCTCGATCGCGCGCTCGACATCGTGCGCGCGGTGCGCGCCCGCCGACACCGTCGTGGTGCTGGG CCGCGACATCGGCCGGCCCGGCGCCGCGCTGCGCAGCACGACGCTCGGCGCGCTGAGCGCGGCCGAGGTCGACATGCGCA CGATGGTGATCGTCGGCTCGTCGAAGACGCGCCGCTTCGTGCGCGGCGAGCGCGAATGGGTCTATACGCCGCGGTTCTAC GACTGACGCGCGCGCCGCTTCGCAAATGCGGCGCCCGCTGCGGCCCGGACCGGGGCGGCGGCGGCCGGCCGTGA
Upstream 100 bases:
>100_bases TCGAACGCGCGACCATGACGAACCAGCGCATCGTGCCGCTCGCCGAGGTCGACCCGATGGCCTCGCCGTATTTTTCGCTG CTCGTCGTGCCGGGGGAAAA
Downstream 100 bases:
>100_bases CAGACTGGGCCGGTTCGGGCAGGTGCGGCCCGTTTCGGCCCACCGCCGCAGCCTGCCGCCGAGGCGGGCCGCCGCGCGCC GGCTCGAAGCGCCCGGCCTC
Product: CbiG protein/precorrin-3B C17-methyltransferase
Products: NA
Alternate protein names: Precorrin-3 methylase; Precorrin-3 methyltransferase [H]
Number of amino acids: Translated: 637; Mature: 636
Protein sequence:
>637_residues MARLNVAPAIVVLGAGALPVAERIRARYAGATLHALAGRAQGDLAFTELGAHLRELYARGTPIVALCAAGIVIRCVAPCL ADKGIEPPVLAVAEDGSAVVPLLGGLTGANLFAREIAALLAVAPAITTSGELRFGACVLNPPDGYALADLGAGKRFVSDL LAGAGTRVDGEAPWLDGVALPLDPGASHAIRITPRTAGGGAGELVIHPRSVVVALLPEAHPGSARPLPAPSADAALETRA DPLAARVLDALAAAGLAPLALAALVAPRRAMRDATLARAARALGVPLRFVAAATAEDHLERGADAGALLDAALAAAAIAA TRLPAASAASGDQADSADHDAARAMPIAIAVANAPVDADALGQARGSLTVLGLGPGSAELLAPAARAALAAATDILGYAT YVRMAGPFRADQRVHETDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGSDDAAWADVALDVVPGVS AALATAAQAGAPLGHDFCVISLSDNLKPWSVIEERLALAARADLVMAFYNPVSRARPWQLDRALDIVRAVRARRHRRGAG PRHRPARRRAAQHDARRAERGRGRHAHDGDRRLVEDAPLRARRARMGLYAAVLRLTRAPLRKCGARCGPDRGGGGRP
Sequences:
>Translated_637_residues MARLNVAPAIVVLGAGALPVAERIRARYAGATLHALAGRAQGDLAFTELGAHLRELYARGTPIVALCAAGIVIRCVAPCL ADKGIEPPVLAVAEDGSAVVPLLGGLTGANLFAREIAALLAVAPAITTSGELRFGACVLNPPDGYALADLGAGKRFVSDL LAGAGTRVDGEAPWLDGVALPLDPGASHAIRITPRTAGGGAGELVIHPRSVVVALLPEAHPGSARPLPAPSADAALETRA DPLAARVLDALAAAGLAPLALAALVAPRRAMRDATLARAARALGVPLRFVAAATAEDHLERGADAGALLDAALAAAAIAA TRLPAASAASGDQADSADHDAARAMPIAIAVANAPVDADALGQARGSLTVLGLGPGSAELLAPAARAALAAATDILGYAT YVRMAGPFRADQRVHETDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGSDDAAWADVALDVVPGVS AALATAAQAGAPLGHDFCVISLSDNLKPWSVIEERLALAARADLVMAFYNPVSRARPWQLDRALDIVRAVRARRHRRGAG PRHRPARRRAAQHDARRAERGRGRHAHDGDRRLVEDAPLRARRARMGLYAAVLRLTRAPLRKCGARCGPDRGGGGRP >Mature_636_residues ARLNVAPAIVVLGAGALPVAERIRARYAGATLHALAGRAQGDLAFTELGAHLRELYARGTPIVALCAAGIVIRCVAPCLA DKGIEPPVLAVAEDGSAVVPLLGGLTGANLFAREIAALLAVAPAITTSGELRFGACVLNPPDGYALADLGAGKRFVSDLL AGAGTRVDGEAPWLDGVALPLDPGASHAIRITPRTAGGGAGELVIHPRSVVVALLPEAHPGSARPLPAPSADAALETRAD PLAARVLDALAAAGLAPLALAALVAPRRAMRDATLARAARALGVPLRFVAAATAEDHLERGADAGALLDAALAAAAIAAT RLPAASAASGDQADSADHDAARAMPIAIAVANAPVDADALGQARGSLTVLGLGPGSAELLAPAARAALAAATDILGYATY VRMAGPFRADQRVHETDNREELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGSDDAAWADVALDVVPGVSA ALATAAQAGAPLGHDFCVISLSDNLKPWSVIEERLALAARADLVMAFYNPVSRARPWQLDRALDIVRAVRARRHRRGAGP RHRPARRRAAQHDARRAERGRGRHAHDGDRRLVEDAPLRARRARMGLYAAVLRLTRAPLRKCGARCGPDRGGGGRP
Specific function: Methyltransferase that catalyzes the methylation of C-17 in precorrin-3B to form precorrin-4 [H]
COG id: COG1010
COG function: function code H; Precorrin-3B methylase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR014776 - InterPro: IPR006363 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.131 [H]
Molecular weight: Translated: 65327; Mature: 65195
Theoretical pI: Translated: 9.90; Mature: 9.90
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.1 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 1.1 %Cys (Mature Protein) 0.9 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MARLNVAPAIVVLGAGALPVAERIRARYAGATLHALAGRAQGDLAFTELGAHLRELYARG CCCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC TPIVALCAAGIVIRCVAPCLADKGIEPPVLAVAEDGSAVVPLLGGLTGANLFAREIAALL CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCCCCHHHHHHHHHHHH AVAPAITTSGELRFGACVLNPPDGYALADLGAGKRFVSDLLAGAGTRVDGEAPWLDGVAL HHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEE PLDPGASHAIRITPRTAGGGAGELVIHPRSVVVALLPEAHPGSARPLPAPSADAALETRA CCCCCCCCEEEEEECCCCCCCCEEEECCHHEEEEECCCCCCCCCCCCCCCCCCCHHHHCC DPLAARVLDALAAAGLAPLALAALVAPRRAMRDATLARAARALGVPLRFVAAATAEDHLE CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RGADAGALLDAALAAAAIAATRLPAASAASGDQADSADHDAARAMPIAIAVANAPVDADA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCHHH LGQARGSLTVLGLGPGSAELLAPAARAALAAATDILGYATYVRMAGPFRADQRVHETDNR HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCH EELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGSDDAAWADVALDVVPGVS HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH AALATAAQAGAPLGHDFCVISLSDNLKPWSVIEERLALAARADLVMAFYNPVSRARPWQL HHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCH DRALDIVRAVRARRHRRGAGPRHRPARRRAAQHDARRAERGRGRHAHDGDRRLVEDAPLR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHH ARRARMGLYAAVLRLTRAPLRKCGARCGPDRGGGGRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC >Mature Secondary Structure ARLNVAPAIVVLGAGALPVAERIRARYAGATLHALAGRAQGDLAFTELGAHLRELYARG CCCCCCCEEEEECCCCCHHHHHHHHHHCCHHHHHHHCCCCCCHHHHHHHHHHHHHHHCC TPIVALCAAGIVIRCVAPCLADKGIEPPVLAVAEDGSAVVPLLGGLTGANLFAREIAALL CCHHHHHHHHHHHHHHHHHHHCCCCCCCEEEEECCCCEEHHHHCCCCCHHHHHHHHHHHH AVAPAITTSGELRFGACVLNPPDGYALADLGAGKRFVSDLLAGAGTRVDGEAPWLDGVAL HHHHHHCCCCCEEEEEEEECCCCCCEEECCCCCHHHHHHHHHCCCCCCCCCCCCCCCEEE PLDPGASHAIRITPRTAGGGAGELVIHPRSVVVALLPEAHPGSARPLPAPSADAALETRA CCCCCCCCEEEEEECCCCCCCCEEEECCHHEEEEECCCCCCCCCCCCCCCCCCCHHHHCC DPLAARVLDALAAAGLAPLALAALVAPRRAMRDATLARAARALGVPLRFVAAATAEDHLE CHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH RGADAGALLDAALAAAAIAATRLPAASAASGDQADSADHDAARAMPIAIAVANAPVDADA CCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHCCEEEEEEECCCCCHHH LGQARGSLTVLGLGPGSAELLAPAARAALAAATDILGYATYVRMAGPFRADQRVHETDNR HHCCCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHCCCCH EELQRARHAFELAARGRRVAVVSSGDPGVFAMAAAVLEALDGSDDAAWADVALDVVPGVS HHHHHHHHHHHHHHCCCEEEEEECCCCCHHHHHHHHHHHHCCCCCCHHHHHHHHHHCCHH AALATAAQAGAPLGHDFCVISLSDNLKPWSVIEERLALAARADLVMAFYNPVSRARPWQL HHHHHHHHCCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHCHHHCCCCCCH DRALDIVRAVRARRHRRGAGPRHRPARRRAAQHDARRAERGRGRHAHDGDRRLVEDAPLR HHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHCCCHH ARRARMGLYAAVLRLTRAPLRKCGARCGPDRGGGGRP HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 2211521; 8226690 [H]