| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cobI [H]
Identifier: 238027442
GI number: 238027442
Start: 2018785
End: 2019555
Strand: Direct
Name: cobI [H]
Synonym: bglu_1g18450
Alternate gene names: 238027442
Gene position: 2018785-2019555 (Clockwise)
Preceding gene: 238027441
Following gene: 238027443
Centisome position: 51.68
GC content: 70.17
Gene sequence:
>771_bases ATGAAGCTGCCGTCGGATTCGCTCCCGCGCGCACGCGCCGGCATCGCCCGCGGCCGGCTGTTCGGCATCGGCGTCGGCCC CGGCGACCCCGAGCTACTGACCCTGAAGGCCGTGCGCCTGCTGCGCGCCGCGCCGGTGGTGGCCTACTTCGTCGCCAAGG GCAAGAAAGGCAATGCCTACGGCATCGTCGAGGCGCACCTGGGCGAGACGCAGCATCAGCTGCCGCTGGTCTATCCGGTC ACCACCGAGGCGCTCGCGCCGCCGCTCAGCTACGAGCGCATCATCGCCGACTTCTACGACACCGCCGCCGAGGTGGTGGC CGGGCACCTCGACGCGGGCCGCGACGTAGCCGTGATCTGCGAGGGCGATCCGCTCTTCTACGGCTCCTACATGTATCTGC ACGACCGGCTCGCGCAGCGCTACGAGACGGAGGTGGTGCCCGGCGTGTGCTCGATGCTCGGCGGCGCGGCCGTGCTCGGC GTGCCGCTCGTCTACCGCAACCAGACGCTGTCGGTGCTCTCGGGCGTGCTGCCCGCCGACCAGCTGCGCGCGCGGCTCGA GCAGGCCGACGCGGCCGTGGTGATGAAGCTCGGCCGCAATTTCGACAAGGTGCGCCGCGTGCTGGAGGAACTCGGGCTCG CCAAGCGCGCGCTGTACGTCGAACGCGCGACCATGACGAACCAGCGCATCGTGCCGCTCGCCGAGGTCGACCCGATGGCC TCGCCGTATTTTTCGCTGCTCGTCGTGCCGGGGGAAAAATGGCAAGGCTGA
Upstream 100 bases:
>100_bases CGGCCGACAGCCGCGGCGTGCCGTTCGTGGCCGTGGCGGGCCGGCGCGGCGGCAGCGCGATGGCCGCCGCCGCCGTCAAC GCGCTGGCTGCGGAGGTCGA
Downstream 100 bases:
>100_bases ACGTCGCGCCGGCGATCGTCGTGCTCGGCGCCGGCGCGCTGCCGGTGGCCGAGCGGATTCGCGCGCGCTACGCGGGCGCC ACCCTCCACGCGCTCGCGGG
Product: precorrin-2 C(20)-methyltransferase
Products: NA
Alternate protein names: S-adenosyl-L-methionine--precorrin-2 methyltransferase; SP2MT [H]
Number of amino acids: Translated: 256; Mature: 256
Protein sequence:
>256_residues MKLPSDSLPRARAGIARGRLFGIGVGPGDPELLTLKAVRLLRAAPVVAYFVAKGKKGNAYGIVEAHLGETQHQLPLVYPV TTEALAPPLSYERIIADFYDTAAEVVAGHLDAGRDVAVICEGDPLFYGSYMYLHDRLAQRYETEVVPGVCSMLGGAAVLG VPLVYRNQTLSVLSGVLPADQLRARLEQADAAVVMKLGRNFDKVRRVLEELGLAKRALYVERATMTNQRIVPLAEVDPMA SPYFSLLVVPGEKWQG
Sequences:
>Translated_256_residues MKLPSDSLPRARAGIARGRLFGIGVGPGDPELLTLKAVRLLRAAPVVAYFVAKGKKGNAYGIVEAHLGETQHQLPLVYPV TTEALAPPLSYERIIADFYDTAAEVVAGHLDAGRDVAVICEGDPLFYGSYMYLHDRLAQRYETEVVPGVCSMLGGAAVLG VPLVYRNQTLSVLSGVLPADQLRARLEQADAAVVMKLGRNFDKVRRVLEELGLAKRALYVERATMTNQRIVPLAEVDPMA SPYFSLLVVPGEKWQG >Mature_256_residues MKLPSDSLPRARAGIARGRLFGIGVGPGDPELLTLKAVRLLRAAPVVAYFVAKGKKGNAYGIVEAHLGETQHQLPLVYPV TTEALAPPLSYERIIADFYDTAAEVVAGHLDAGRDVAVICEGDPLFYGSYMYLHDRLAQRYETEVVPGVCSMLGGAAVLG VPLVYRNQTLSVLSGVLPADQLRARLEQADAAVVMKLGRNFDKVRRVLEELGLAKRALYVERATMTNQRIVPLAEVDPMA SPYFSLLVVPGEKWQG
Specific function: Methylates precorrin-2 at the C-20 position to produce precorrin-3A [H]
COG id: COG2243
COG function: function code H; Precorrin-2 methylase
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the precorrin methyltransferase family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000878 - InterPro: IPR014777 - InterPro: IPR012382 - InterPro: IPR006364 [H]
Pfam domain/function: PF00590 TP_methylase [H]
EC number: =2.1.1.130 [H]
Molecular weight: Translated: 27770; Mature: 27770
Theoretical pI: Translated: 8.18; Mature: 8.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKLPSDSLPRARAGIARGRLFGIGVGPGDPELLTLKAVRLLRAAPVVAYFVAKGKKGNAY CCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE GIVEAHLGETQHQLPLVYPVTTEALAPPLSYERIIADFYDTAAEVVAGHLDAGRDVAVIC EEEEECCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE EGDPLFYGSYMYLHDRLAQRYETEVVPGVCSMLGGAAVLGVPLVYRNQTLSVLSGVLPAD CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCHHHHHHCCCCHH QLRARLEQADAAVVMKLGRNFDKVRRVLEELGLAKRALYVERATMTNQRIVPLAEVDPMA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHCCCCCC SPYFSLLVVPGEKWQG CCCEEEEEECCCCCCC >Mature Secondary Structure MKLPSDSLPRARAGIARGRLFGIGVGPGDPELLTLKAVRLLRAAPVVAYFVAKGKKGNAY CCCCCCCCCHHHHHHHCCCEEEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEE GIVEAHLGETQHQLPLVYPVTTEALAPPLSYERIIADFYDTAAEVVAGHLDAGRDVAVIC EEEEECCCCCCCCCEEEEECCHHHHCCCCHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEE EGDPLFYGSYMYLHDRLAQRYETEVVPGVCSMLGGAAVLGVPLVYRNQTLSVLSGVLPAD CCCCEEECHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCEECCCHHHHHHCCCCHH QLRARLEQADAAVVMKLGRNFDKVRRVLEELGLAKRALYVERATMTNQRIVPLAEVDPMA HHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHCHHHHHHHHHHHHCCCCCCCCHHCCCCCC SPYFSLLVVPGEKWQG CCCEEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 10984043 [H]