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The map label for this gene is osmF [H]

Identifier: 238027431

GI number: 238027431

Start: 2006376

End: 2007311

Strand: Direct

Name: osmF [H]

Synonym: bglu_1g18340

Alternate gene names: 238027431

Gene position: 2006376-2007311 (Clockwise)

Preceding gene: 238027429

Following gene: 238027432

Centisome position: 51.36

GC content: 69.87

Gene sequence:

>936_bases
ATGGATACCGCCGTTCGCCGCCGCATCTGCGCGGCGCTTACGCTGGCCGCCGCGTTCGGCGGCACGCTCGCCGCCGGGGC
GGCCCACGCCGACACGATCACCGTCGCCTCGAAGATCGACACCGAAGGCAGCCTGCTCGGCAACCTGATCGCGCAGGTGC
TCAAGTCGCACGGCCTGGGCGTGACCGACAAGATCAGCCTCGGCGCCACGCCGATCGTGCGCCGCGCGCTGGTGGCGGGC
GAGATCGACGTCTACCCCGAGTACACCGGCAATGCCGCGTTCTTCTTCAACAAGGCCGGCGACCCGGCCTGGAAGAACGC
CGCGCGCGGCTATGCCGAAGCCAAACGGCTCGACTATTCGGCCAACCATCTGGTCTGGCTCACGCCCGCGCCCGCCAACA
ACACCTGGGGCGTGGCCGTGTACGGGCCGCTCGCCGCCCAGCAGCACCTGAAGACGTTCAGCGACTTCGGCCGCTGGGTC
GCCTCGGGCGGCAAGGTCAAGCTCGCGGCGTCGGCCGAGTTCGTCAACAGCGCCTCGGCCCTGCCGTCGTTCGAGAAGGC
CTACGGCTTCAAGCTGAAGCCGGACCAGCTGCTGGTGCTCTCGGGCGGCGACACGGCCGCCACGATCCGCGCGGCGGCCG
CGCAGACCGACGGCGTCAACGCGGCGATGGTGTATGGCACCGACGGCGCGATCGCCGCCTCCGGGCTCGTGCTGCTCGAG
GACGACAAGCAGGTGCAGCCCGTCTACGCCCCCGCGCCGGTGATCCGCGAAGCGGTGCTGAAGGCGCATCCGCAGATCGC
CGACTGGCTCGGGCCGGTGTTCGCGAGCCTCGACCTCAAGACGCTGCAGACCCTCAACAGCCGCATCCAGATCAACGGCG
AACCGGCCGCCCATGTCGCGGCCGACTACCTGAAGGCGAAGGGCTTCGTCAAATGA

Upstream 100 bases:

>100_bases
CTTGGGTTTGCCAAACGCGCGCCACTCGCGTAACGTTGAACGCCGTTTGGCGGATTGCGCGCCATGTCCCCCGACCGCCC
CTCCAGGAGGCCGCTTCACC

Downstream 100 bases:

>100_bases
CGGGCCCCGCCGCGCGGCCGGCGCCTTCCGGCCAGCGCCGGCCGCGCGGCCATGTGGACCGCGTCGGCGTGCTGGTCGCG
CTGGTCGCGTGCGGCGCGCT

Product: glycine betaine/choline ABC transporter periplasmic ligand binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 311; Mature: 311

Protein sequence:

>311_residues
MDTAVRRRICAALTLAAAFGGTLAAGAAHADTITVASKIDTEGSLLGNLIAQVLKSHGLGVTDKISLGATPIVRRALVAG
EIDVYPEYTGNAAFFFNKAGDPAWKNAARGYAEAKRLDYSANHLVWLTPAPANNTWGVAVYGPLAAQQHLKTFSDFGRWV
ASGGKVKLAASAEFVNSASALPSFEKAYGFKLKPDQLLVLSGGDTAATIRAAAAQTDGVNAAMVYGTDGAIAASGLVLLE
DDKQVQPVYAPAPVIREAVLKAHPQIADWLGPVFASLDLKTLQTLNSRIQINGEPAAHVAADYLKAKGFVK

Sequences:

>Translated_311_residues
MDTAVRRRICAALTLAAAFGGTLAAGAAHADTITVASKIDTEGSLLGNLIAQVLKSHGLGVTDKISLGATPIVRRALVAG
EIDVYPEYTGNAAFFFNKAGDPAWKNAARGYAEAKRLDYSANHLVWLTPAPANNTWGVAVYGPLAAQQHLKTFSDFGRWV
ASGGKVKLAASAEFVNSASALPSFEKAYGFKLKPDQLLVLSGGDTAATIRAAAAQTDGVNAAMVYGTDGAIAASGLVLLE
DDKQVQPVYAPAPVIREAVLKAHPQIADWLGPVFASLDLKTLQTLNSRIQINGEPAAHVAADYLKAKGFVK
>Mature_311_residues
MDTAVRRRICAALTLAAAFGGTLAAGAAHADTITVASKIDTEGSLLGNLIAQVLKSHGLGVTDKISLGATPIVRRALVAG
EIDVYPEYTGNAAFFFNKAGDPAWKNAARGYAEAKRLDYSANHLVWLTPAPANNTWGVAVYGPLAAQQHLKTFSDFGRWV
ASGGKVKLAASAEFVNSASALPSFEKAYGFKLKPDQLLVLSGGDTAATIRAAAAQTDGVNAAMVYGTDGAIAASGLVLLE
DDKQVQPVYAPAPVIREAVLKAHPQIADWLGPVFASLDLKTLQTLNSRIQINGEPAAHVAADYLKAKGFVK

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules [H]

COG id: COG1732

COG function: function code M; Periplasmic glycine betaine/choline-binding (lipo)protein of an ABC-type transport system (osmoprotectant binding protein)

Gene ontology:

Cell location: Periplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI1788452, Length=282, Percent_Identity=61.3475177304965, Blast_Score=359, Evalue=1e-100,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR007210 [H]

Pfam domain/function: PF04069 OpuAC [H]

EC number: NA

Molecular weight: Translated: 32483; Mature: 32483

Theoretical pI: Translated: 9.18; Mature: 9.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.0 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MDTAVRRRICAALTLAAAFGGTLAAGAAHADTITVASKIDTEGSLLGNLIAQVLKSHGLG
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
VTDKISLGATPIVRRALVAGEIDVYPEYTGNAAFFFNKAGDPAWKNAARGYAEAKRLDYS
CCCEECCCCCHHHHHHHHHCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC
ANHLVWLTPAPANNTWGVAVYGPLAAQQHLKTFSDFGRWVASGGKVKLAASAEFVNSASA
CCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHC
LPSFEKAYGFKLKPDQLLVLSGGDTAATIRAAAAQTDGVNAAMVYGTDGAIAASGLVLLE
CCCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHCCEEEEE
DDKQVQPVYAPAPVIREAVLKAHPQIADWLGPVFASLDLKTLQTLNSRIQINGEPAAHVA
CCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCHHHHH
ADYLKAKGFVK
HHHHHHCCCCC
>Mature Secondary Structure
MDTAVRRRICAALTLAAAFGGTLAAGAAHADTITVASKIDTEGSLLGNLIAQVLKSHGLG
CCHHHHHHHHHHHHHHHHHCCHHHCCCCCCCEEEEEECCCCCHHHHHHHHHHHHHHCCCC
VTDKISLGATPIVRRALVAGEIDVYPEYTGNAAFFFNKAGDPAWKNAARGYAEAKRLDYS
CCCEECCCCCHHHHHHHHHCCEEECCCCCCCEEEEEECCCCHHHHHHHHHHHHHHHCCCC
ANHLVWLTPAPANNTWGVAVYGPLAAQQHLKTFSDFGRWVASGGKVKLAASAEFVNSASA
CCEEEEEECCCCCCCCEEEEECCHHHHHHHHHHHHHHHHHHCCCCEEEEECHHHHHHHHC
LPSFEKAYGFKLKPDQLLVLSGGDTAATIRAAAAQTDGVNAAMVYGTDGAIAASGLVLLE
CCCHHHHCCCCCCCCCEEEEECCCCHHHHHHHHHCCCCCCEEEEECCCCCHHHCCEEEEE
DDKQVQPVYAPAPVIREAVLKAHPQIADWLGPVFASLDLKTLQTLNSRIQINGEPAAHVA
CCCCCCCEECCHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHCCEEEECCCCHHHHH
ADYLKAKGFVK
HHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]