Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is yehY [H]

Identifier: 238027432

GI number: 238027432

Start: 2007308

End: 2008504

Strand: Direct

Name: yehY [H]

Synonym: bglu_1g18350

Alternate gene names: 238027432

Gene position: 2007308-2008504 (Clockwise)

Preceding gene: 238027431

Following gene: 238027433

Centisome position: 51.38

GC content: 76.78

Gene sequence:

>1197_bases
ATGACGGGCCCCGCCGCGCGGCCGGCGCCTTCCGGCCAGCGCCGGCCGCGCGGCCATGTGGACCGCGTCGGCGTGCTGGT
CGCGCTGGTCGCGTGCGGCGCGCTCGCGCTGCCCTTCGTCACGTTCCGCGCGAACCGGATCCTGCCGGGCCATGGCCTGA
CGCTGCCCCACGTGTTCCCCGCCCCGCTGGCCGCGCTCGCGCTGGCCGGCTGGCTCGCGGCCGCCGGGTTCGCGCTCGCG
CGCACGCCCCCCGGCTGGCGCGCCGTGGCGGGCACGGCGGCGCTGGTCTGGCTCGGCTACTGGCTCGGCGCGGCGCCCGC
GCGGCTGGTCGGCGGTGCCATGCCGATCGCGCGCGTCTCGCCCGCGGCCGGCGCCTGGCTGCTGCTGTTCGCGTTCGCGG
TGCTGATCGCCGACGCGCTGGCGCGGCTGGCGCTCGGCCCGCTCAAGCGCCTCGGCGTGCTGGCGGTGGCGCTCGCGGCG
CTCGCCGCCGCGCTCGCGAGCGGGACATGGGACGGCCTGTCGGTGATGCAGGAATACGCCGTGCGCGCCGACGCGTTCTG
GAGCGAGGCGGCCCGCCATCTGGCGCTGGTGGCCGGCTCGACGGGCGCCGCGTTCGCCGTGGCGCTGCCGCTGGGCATCG
GCTGCGCGCACCGCCCGGCCTGGCGCGCGACGCTGCTGCCGGCGCTGAACGTGGTGCAGACCATCCCGAGCATCGCGCTG
TTCGGCATCCTGATGGTGCCGCTCGGCCTGCTGGCGGCGCACCTGCCGCTCGCCGCGGCGCTCGGCATCGGCGGGATCGG
CCCGGCGCCCGCCTTCGTCGCGCTGTTCCTGTACGCGCTGCTGCCGATCGTGTCGAGCGTGGTGGTGGGAATCGACGGCG
TCGACGCGCGCGTGATCGAGGCCGCCGCCGCGATGGGCATGACGCCGCGCCAGCGCGTGCTCGGCGTGGAACTCGCGCTG
GCGCTCCCGGTGATCCTCGCCGGGCTGCGCATCGTGCTGGTGCAGAACGTCGGCCTGACCGCGGTGGCCGCGCTGATCGG
CGGCGGCGGCTTCGGCACCTTCATCTTCCAGGGGCTCGGGCAGGCCGCCACCGACCTCGTGCTGCTCGGCGCGCTGCCGA
CCATCGCGCTCGCGTCGGTGCTGTCGGTGGTGTTCGACGCGGCCATCCAGTTCAGCCAACGGAGTGCTTCCCGATGA

Upstream 100 bases:

>100_bases
ACCTCAAGACGCTGCAGACCCTCAACAGCCGCATCCAGATCAACGGCGAACCGGCCGCCCATGTCGCGGCCGACTACCTG
AAGGCGAAGGGCTTCGTCAA

Downstream 100 bases:

>100_bases
TCGAGATCGACCGCGTGACGCGTCGCTTCGGGCCGCTCGTGGCGGTCGACGACGTCTCGCTCGCCGTCGCGCCCGGCACC
GTCACGGCGCTGGTGGGCGC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 398; Mature: 397

Protein sequence:

>398_residues
MTGPAARPAPSGQRRPRGHVDRVGVLVALVACGALALPFVTFRANRILPGHGLTLPHVFPAPLAALALAGWLAAAGFALA
RTPPGWRAVAGTAALVWLGYWLGAAPARLVGGAMPIARVSPAAGAWLLLFAFAVLIADALARLALGPLKRLGVLAVALAA
LAAALASGTWDGLSVMQEYAVRADAFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIAL
FGILMVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIEAAAAMGMTPRQRVLGVELAL
ALPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLGQAATDLVLLGALPTIALASVLSVVFDAAIQFSQRSASR

Sequences:

>Translated_398_residues
MTGPAARPAPSGQRRPRGHVDRVGVLVALVACGALALPFVTFRANRILPGHGLTLPHVFPAPLAALALAGWLAAAGFALA
RTPPGWRAVAGTAALVWLGYWLGAAPARLVGGAMPIARVSPAAGAWLLLFAFAVLIADALARLALGPLKRLGVLAVALAA
LAAALASGTWDGLSVMQEYAVRADAFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIAL
FGILMVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIEAAAAMGMTPRQRVLGVELAL
ALPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLGQAATDLVLLGALPTIALASVLSVVFDAAIQFSQRSASR
>Mature_397_residues
TGPAARPAPSGQRRPRGHVDRVGVLVALVACGALALPFVTFRANRILPGHGLTLPHVFPAPLAALALAGWLAAAGFALAR
TPPGWRAVAGTAALVWLGYWLGAAPARLVGGAMPIARVSPAAGAWLLLFAFAVLIADALARLALGPLKRLGVLAVALAAL
AAALASGTWDGLSVMQEYAVRADAFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIALF
GILMVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIEAAAAMGMTPRQRVLGVELALA
LPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLGQAATDLVLLGALPTIALASVLSVVFDAAIQFSQRSASR

Specific function: May be part of an ABC transporter complex involved in uptake of osmoprotectant molecules. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1174

COG function: function code E; ABC-type proline/glycine betaine transport systems, permease component

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1788451, Length=355, Percent_Identity=41.4084507042254, Blast_Score=222, Evalue=3e-59,
Organism=Escherichia coli, GI1788449, Length=214, Percent_Identity=35.0467289719626, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1789033, Length=212, Percent_Identity=31.1320754716981, Blast_Score=89, Evalue=4e-19,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 40102; Mature: 39971

Theoretical pI: Translated: 11.96; Mature: 11.96

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
1.3 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTGPAARPAPSGQRRPRGHVDRVGVLVALVACGALALPFVTFRANRILPGHGLTLPHVFP
CCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
APLAALALAGWLAAAGFALARTPPGWRAVAGTAALVWLGYWLGAAPARLVGGAMPIARVS
HHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCC
PAAGAWLLLFAFAVLIADALARLALGPLKRLGVLAVALAALAAALASGTWDGLSVMQEYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VRADAFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIAL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGILMVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAAAMGMTPRQRVLGVELALALPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
QAATDLVLLGALPTIALASVLSVVFDAAIQFSQRSASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TGPAARPAPSGQRRPRGHVDRVGVLVALVACGALALPFVTFRANRILPGHGLTLPHVFP
CCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
APLAALALAGWLAAAGFALARTPPGWRAVAGTAALVWLGYWLGAAPARLVGGAMPIARVS
HHHHHHHHHHHHHHHCHHHHCCCCCCHHHHHHHHHHHHHHHHHCCHHHHHCCCCCHHHCC
PAAGAWLLLFAFAVLIADALARLALGPLKRLGVLAVALAALAAALASGTWDGLSVMQEYA
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHH
VRADAFWSEAARHLALVAGSTGAAFAVALPLGIGCAHRPAWRATLLPALNVVQTIPSIAL
HHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHH
FGILMVPLGLLAAHLPLAAALGIGGIGPAPAFVALFLYALLPIVSSVVVGIDGVDARVIE
HHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHH
AAAAMGMTPRQRVLGVELALALPVILAGLRIVLVQNVGLTAVAALIGGGGFGTFIFQGLG
HHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHCCCHHHHHHHHHHH
QAATDLVLLGALPTIALASVLSVVFDAAIQFSQRSASR
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]