Click here to switch to the map view.

The map label for this gene is atzC [H]

Identifier: 238027394

GI number: 238027394

Start: 1966580

End: 1967767

Strand: Reverse

Name: atzC [H]

Synonym: bglu_1g17900

Alternate gene names: 238027394

Gene position: 1967767-1966580 (Counterclockwise)

Preceding gene: 238027395

Following gene: 238027393

Centisome position: 50.37

GC content: 75.84

Gene sequence:

>1188_bases
ATGAGTTCCCTGCTGATCCGCAACGTCCGGCTCGCGAGCGGCGCCAGCGCCGACATCCGCATCGACGGCGAGCGCTTCGC
CGCGCTCGCCCCCGCGCTCGACGCGCCGCCCGGCTGCACGGTGGAGGACGGCGGCGGGGCGCTCGCGCTGCCGGGCCTCG
TCGAGGCGCACACGCATCTGGACAAGACGCACTGGGGCCTGCCGTGGTTTCGCAACGAGGTGGGGCCGCGGCTGGTCGAC
CGGATCGAATTCGAGCGCCGCTGGCGCGCGACGAGCGGCCACCACGCGGGCCGCCAGTCGCTCGCGCTGGCGCGCGCCTT
CCTCGCGGCCGGCACCACGCGGCTGCGCACCCACGTGGACGTCGACACCGAGGCCGGGCTCAAGCATCTGGAGGGCGTGC
TGGCCACGCGCGAGGCGTTGCGCGGCACGCTGGAGATGCAGATCGTGGCGTTCCCGCAGTCGGGCGTGCTGGCCCGTCCC
GGCACGGCGGCGCTGCTCGACGCGGCCTTGCGCGCGGGCGCCGATTGCCTGGGCGGGCTCGATCCATGCGCGATCGAGGG
CGACCGGACGGCCGCGCTCGACTTGCTGTTCGGGCTGGCCGAGCGGCACGGCAAGCGGCTCGACCTGCATCTGCACGAGC
GCGCGGCGATGGGCGCCGCGTCGCTCGGCGCGATCCTCGATCGCACCGCCGCGCTCGGCATGCGCGCTCGCGTGGCCGTC
AGCCACGGCTTCTGTCTCGGCGGCATCGACCCGCCCGCGCGCGACGCGCTGCTGGCGCGGATGGCCGCGCTCGAGGTGGC
GCTCGTCACCAGCGCGCCGCCCGACGTCGAGGTGCCGCCGCTGATGGCCTGCCGTGCGGCCGGCGTGACGGTGGCCGGCG
GCAACGACGGGATTCGCGATACCTGGACCCCCTACGGACGCCCCGACATGCTCGAACGCGCGATGCTGATCGGCATGCGC
TACAACCTGCGCCGCGACGACGAGCTGGCCGTCGCGCTCGACTGCGTGACCGGCTCGGCCGCACGCGGCTGCGGGTTCGC
CGACTACGGGCTGGTGCCGGGAGCGCGCGCCGATCTGGTGCTGGTGCAGGCCGACACGCCGGCCGAGGCGGTCGCGGCAC
GGCCGCCGCGGCGGCTGGTGGTGGCGGCGGGGCGCGTGGTGGCGCGCGACGGCAGCCTGCTCGATTGA

Upstream 100 bases:

>100_bases
CTGCCGGTGACGATGCTATGAGCCACGCCCGCCTGCGAGCGCATCCGGCGGCGCCGTCGCTTGCCCGATCCACGTCCACG
TTCACCGATCCGATGACGCC

Downstream 100 bases:

>100_bases
GCGCCGCGCGGCCCCGCGGCGGGCCGCGCGATGGCGGGCATGGCGCCTGCTTCGTGGTGCGGCGCGCGCCGCACGCGTGC
ACCGCCGGGCTTGCCGGGCG

Product: cytosine deaminase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MSSLLIRNVRLASGASADIRIDGERFAALAPALDAPPGCTVEDGGGALALPGLVEAHTHLDKTHWGLPWFRNEVGPRLVD
RIEFERRWRATSGHHAGRQSLALARAFLAAGTTRLRTHVDVDTEAGLKHLEGVLATREALRGTLEMQIVAFPQSGVLARP
GTAALLDAALRAGADCLGGLDPCAIEGDRTAALDLLFGLAERHGKRLDLHLHERAAMGAASLGAILDRTAALGMRARVAV
SHGFCLGGIDPPARDALLARMAALEVALVTSAPPDVEVPPLMACRAAGVTVAGGNDGIRDTWTPYGRPDMLERAMLIGMR
YNLRRDDELAVALDCVTGSAARGCGFADYGLVPGARADLVLVQADTPAEAVAARPPRRLVVAAGRVVARDGSLLD

Sequences:

>Translated_395_residues
MSSLLIRNVRLASGASADIRIDGERFAALAPALDAPPGCTVEDGGGALALPGLVEAHTHLDKTHWGLPWFRNEVGPRLVD
RIEFERRWRATSGHHAGRQSLALARAFLAAGTTRLRTHVDVDTEAGLKHLEGVLATREALRGTLEMQIVAFPQSGVLARP
GTAALLDAALRAGADCLGGLDPCAIEGDRTAALDLLFGLAERHGKRLDLHLHERAAMGAASLGAILDRTAALGMRARVAV
SHGFCLGGIDPPARDALLARMAALEVALVTSAPPDVEVPPLMACRAAGVTVAGGNDGIRDTWTPYGRPDMLERAMLIGMR
YNLRRDDELAVALDCVTGSAARGCGFADYGLVPGARADLVLVQADTPAEAVAARPPRRLVVAAGRVVARDGSLLD
>Mature_394_residues
SSLLIRNVRLASGASADIRIDGERFAALAPALDAPPGCTVEDGGGALALPGLVEAHTHLDKTHWGLPWFRNEVGPRLVDR
IEFERRWRATSGHHAGRQSLALARAFLAAGTTRLRTHVDVDTEAGLKHLEGVLATREALRGTLEMQIVAFPQSGVLARPG
TAALLDAALRAGADCLGGLDPCAIEGDRTAALDLLFGLAERHGKRLDLHLHERAAMGAASLGAILDRTAALGMRARVAVS
HGFCLGGIDPPARDALLARMAALEVALVTSAPPDVEVPPLMACRAAGVTVAGGNDGIRDTWTPYGRPDMLERAMLIGMRY
NLRRDDELAVALDCVTGSAARGCGFADYGLVPGARADLVLVQADTPAEAVAARPPRRLVVAAGRVVARDGSLLD

Specific function: Transforms N-isopropylammelide to cyanuric acid and isopropylamine [H]

COG id: COG0402

COG function: function code FR; Cytosine deaminase and related metal-dependent hydrolases

Gene ontology:

Cell location: Cytoplasm (Potential) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the N-acyl-D-amino-acid deacylase family [H]

Homologues:

Organism=Escherichia coli, GI1786517, Length=352, Percent_Identity=31.5340909090909, Blast_Score=174, Evalue=1e-44,
Organism=Escherichia coli, GI1786531, Length=367, Percent_Identity=28.6103542234332, Blast_Score=120, Evalue=1e-28,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013108
- InterPro:   IPR011059 [H]

Pfam domain/function: PF07969 Amidohydro_3 [H]

EC number: =3.5.99.4 [H]

Molecular weight: Translated: 41471; Mature: 41340

Theoretical pI: Translated: 6.90; Mature: 6.90

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.8 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
1.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
3.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSLLIRNVRLASGASADIRIDGERFAALAPALDAPPGCTVEDGGGALALPGLVEAHTHL
CCCCEEEEEEECCCCCCEEEECCHHHHHHCCCCCCCCCCEEECCCCEEECCCHHHHHHHC
DKTHWGLPWFRNEVGPRLVDRIEFERRWRATSGHHAGRQSLALARAFLAAGTTRLRTHVD
CCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEEC
VDTEAGLKHLEGVLATREALRGTLEMQIVAFPQSGVLARPGTAALLDAALRAGADCLGGL
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEECCCHHHHHHHHHHCCHHHHCCC
DPCAIEGDRTAALDLLFGLAERHGKRLDLHLHERAAMGAASLGAILDRTAALGMRARVAV
CCEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHCCCEEEEE
SHGFCLGGIDPPARDALLARMAALEVALVTSAPPDVEVPPLMACRAAGVTVAGGNDGIRD
ECCEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCCC
TWTPYGRPDMLERAMLIGMRYNLRRDDELAVALDCVTGSAARGCGFADYGLVPGARADLV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
LVQADTPAEAVAARPPRRLVVAAGRVVARDGSLLD
EEECCCCHHHHHCCCCCEEEEECCEEEECCCCCCC
>Mature Secondary Structure 
SSLLIRNVRLASGASADIRIDGERFAALAPALDAPPGCTVEDGGGALALPGLVEAHTHL
CCCEEEEEEECCCCCCEEEECCHHHHHHCCCCCCCCCCEEECCCCEEECCCHHHHHHHC
DKTHWGLPWFRNEVGPRLVDRIEFERRWRATSGHHAGRQSLALARAFLAAGTTRLRTHVD
CCCCCCCCHHHHHCCHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHCCCHHEEEEEC
VDTEAGLKHLEGVLATREALRGTLEMQIVAFPQSGVLARPGTAALLDAALRAGADCLGGL
CCHHHHHHHHHHHHHHHHHHCCEEEEEEEEECCCCCEECCCHHHHHHHHHHCCHHHHCCC
DPCAIEGDRTAALDLLFGLAERHGKRLDLHLHERAAMGAASLGAILDRTAALGMRARVAV
CCEEECCCCHHHHHHHHHHHHHCCCEEEEEEHHHHHHCHHHHHHHHHHHHHHCCCEEEEE
SHGFCLGGIDPPARDALLARMAALEVALVTSAPPDVEVPPLMACRAAGVTVAGGNDGIRD
ECCEEECCCCCCHHHHHHHHHHHHHEEEEECCCCCCCCCHHHHHHHCCEEEECCCCCCCC
TWTPYGRPDMLERAMLIGMRYNLRRDDELAVALDCVTGSAARGCGFADYGLVPGARADLV
CCCCCCCHHHHHHHHHHHHHCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCCCCCCCEE
LVQADTPAEAVAARPPRRLVVAAGRVVARDGSLLD
EEECCCCHHHHHCCCCCEEEEECCEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9422605 [H]