| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027393
Identifier: 238027393
GI number: 238027393
Start: 1965837
End: 1966304
Strand: Reverse
Name: 238027393
Synonym: bglu_1g17890
Alternate gene names: NA
Gene position: 1966304-1965837 (Counterclockwise)
Preceding gene: 238027394
Following gene: 238027391
Centisome position: 50.33
GC content: 73.5
Gene sequence:
>468_bases ATGATCGAACCTCCCGCTAGCCCAGCCGCCGCGTCGCACGCGGCCCCCGAGGCACACGACGCCCTCGGCAAGCTGCTCGA CAGCCTGCACCGGCGCGGCTTCCTGCGCGTGGCGCACGACTTCGTCGATGCCAACAGCCAGGTCGCGGAGATGCTCGGCG GCCTGAGCCAGCCCGAGGTCCAGGCCGGCATGCAGAACCTCGCGGTGCTGTTGACGGCGCTGTCGCGGATTCCCGCCGAC CAGCTCGGCCGCTTCGCGTTCGCGGCCACCGATGCCGTGAACCACGTCGCGAACTGGCGGCCGGCCGACCACCGCGACGC GGCGCCCGGCGTGACGGGCGCCTACCGGCTGCTGCACGACGAGGCGCTATGGCAGGCGGTGACGCCGCTGCTGGAAGGCT TGAAGGTGTTCTTGCAGCGCCTGCACGAGGCGCCGCCGGCGGCAGGCCCCGGAGCCGGCGGCGCCTGA
Upstream 100 bases:
>100_bases GGGGTGGGGCGGGAAGCAGGCCGCCCGCGCCGGCGGGCCGGGCGCCGAAGCCGGATCGCTGCTGGAATGGGGGCTCATTC ACGAGCGCCCGGAGCCGCCC
Downstream 100 bases:
>100_bases AACAGGCGCGCGGCTACCCGCTCGGCAGGGGGCTGATCGAGGCGCTGAATCCGGCCGGCGGCGGGCCGCGCCCATCGGAT CATCGGATCGCAGCGGCCGG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 155; Mature: 155
Protein sequence:
>155_residues MIEPPASPAAASHAAPEAHDALGKLLDSLHRRGFLRVAHDFVDANSQVAEMLGGLSQPEVQAGMQNLAVLLTALSRIPAD QLGRFAFAATDAVNHVANWRPADHRDAAPGVTGAYRLLHDEALWQAVTPLLEGLKVFLQRLHEAPPAAGPGAGGA
Sequences:
>Translated_155_residues MIEPPASPAAASHAAPEAHDALGKLLDSLHRRGFLRVAHDFVDANSQVAEMLGGLSQPEVQAGMQNLAVLLTALSRIPAD QLGRFAFAATDAVNHVANWRPADHRDAAPGVTGAYRLLHDEALWQAVTPLLEGLKVFLQRLHEAPPAAGPGAGGA >Mature_155_residues MIEPPASPAAASHAAPEAHDALGKLLDSLHRRGFLRVAHDFVDANSQVAEMLGGLSQPEVQAGMQNLAVLLTALSRIPAD QLGRFAFAATDAVNHVANWRPADHRDAAPGVTGAYRLLHDEALWQAVTPLLEGLKVFLQRLHEAPPAAGPGAGGA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 16254; Mature: 16254
Theoretical pI: Translated: 6.30; Mature: 6.30
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MIEPPASPAAASHAAPEAHDALGKLLDSLHRRGFLRVAHDFVDANSQVAEMLGGLSQPEV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH QAGMQNLAVLLTALSRIPADQLGRFAFAATDAVNHVANWRPADHRDAAPGVTGAYRLLHD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH EALWQAVTPLLEGLKVFLQRLHEAPPAAGPGAGGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC >Mature Secondary Structure MIEPPASPAAASHAAPEAHDALGKLLDSLHRRGFLRVAHDFVDANSQVAEMLGGLSQPEV CCCCCCCCCHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHCCCCCHHH QAGMQNLAVLLTALSRIPADQLGRFAFAATDAVNHVANWRPADHRDAAPGVTGAYRLLHD HHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHH EALWQAVTPLLEGLKVFLQRLHEAPPAAGPGAGGA HHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA