| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027194
Identifier: 238027194
GI number: 238027194
Start: 1729334
End: 1730050
Strand: Direct
Name: 238027194
Synonym: bglu_1g15800
Alternate gene names: NA
Gene position: 1729334-1730050 (Clockwise)
Preceding gene: 238027193
Following gene: 238027195
Centisome position: 44.27
GC content: 61.23
Gene sequence:
>717_bases ATGGCAGATCTCGACGATTACACCTCGCTGATCACGTCCGAGCACCAGCCCAGGCCGAAGTTTATGGCGCTCGTGGGCGC GCTGGTGTCGCCGCTCGTCGACCAGATGAACGTGGTGGCCAGCATGCCGGCGCTGTTCGACCTGGACAACGCAGTCGGCG ATCAGCTCGACAAGGTGGGCGAGTGGGTCGGCCTGAGCCGCCAGGTGAGCACGCCGCTGATTGGCGTCTATTTCTCGTTC GACGTGGCCGACCTTGGTTTCGATCAAGGTACGTGGAAAGGACCATTCGACCCAGATACGGGGCTGGTCTCTCTCGACGA CGACACGTATCGCATGACGCTGCGCGCGAAGATCGCGGCAAACCACTGGGATGGCACCCCCGACAAGGCGGCCGACATCC TGGATCTTCTGGCGCCACCCGGGACGAACGTGTTCATCGAAGACCCATGCGACATGTCCATCACCATCGGCGTGTCGGGC AAGCAGCCGACGGCCATCTACATCGCGTTGCTGAAGACCGGACTGCTTTCGCTCAAGCCTGAAACGGTTCACATCAACTA CGCGATCACCAGCGTAGACGGAGATCCCATCTTCGGTTTCGACCTCGAAAACGAGTACGTCTCCGGCTTCGACGTGGGCG CCTGGTCGGGCACCACGATCGTCGAAGCCAATCAGCTCGACTACACCTTCTCCCTCGACAACTCGGTGCTCGCGTAG
Upstream 100 bases:
>100_bases CCGGCCCGCGCGGCGCTGGCTCTCCGGACGTCGCGTTGCTGTTCAACGAGTCGGCGTCGTGCAGCGCCGATCGGGTCACG ATCACCACGGGGTAAGTGCC
Downstream 100 bases:
>100_bases CGGGCCCGGCCATCCCATCGGAGTTTCAGTGGCTATCCAGAATGACTTTCTGCCGTTCGCCGTCGGCCCGGGCGCGAACG TGCTATCGCAGTCCTCTTAT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 238; Mature: 237
Protein sequence:
>238_residues MADLDDYTSLITSEHQPRPKFMALVGALVSPLVDQMNVVASMPALFDLDNAVGDQLDKVGEWVGLSRQVSTPLIGVYFSF DVADLGFDQGTWKGPFDPDTGLVSLDDDTYRMTLRAKIAANHWDGTPDKAADILDLLAPPGTNVFIEDPCDMSITIGVSG KQPTAIYIALLKTGLLSLKPETVHINYAITSVDGDPIFGFDLENEYVSGFDVGAWSGTTIVEANQLDYTFSLDNSVLA
Sequences:
>Translated_238_residues MADLDDYTSLITSEHQPRPKFMALVGALVSPLVDQMNVVASMPALFDLDNAVGDQLDKVGEWVGLSRQVSTPLIGVYFSF DVADLGFDQGTWKGPFDPDTGLVSLDDDTYRMTLRAKIAANHWDGTPDKAADILDLLAPPGTNVFIEDPCDMSITIGVSG KQPTAIYIALLKTGLLSLKPETVHINYAITSVDGDPIFGFDLENEYVSGFDVGAWSGTTIVEANQLDYTFSLDNSVLA >Mature_237_residues ADLDDYTSLITSEHQPRPKFMALVGALVSPLVDQMNVVASMPALFDLDNAVGDQLDKVGEWVGLSRQVSTPLIGVYFSFD VADLGFDQGTWKGPFDPDTGLVSLDDDTYRMTLRAKIAANHWDGTPDKAADILDLLAPPGTNVFIEDPCDMSITIGVSGK QPTAIYIALLKTGLLSLKPETVHINYAITSVDGDPIFGFDLENEYVSGFDVGAWSGTTIVEANQLDYTFSLDNSVLA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 25714; Mature: 25583
Theoretical pI: Translated: 3.83; Mature: 3.83
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 2.5 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADLDDYTSLITSEHQPRPKFMALVGALVSPLVDQMNVVASMPALFDLDNAVGDQLDKVG CCCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH EWVGLSRQVSTPLIGVYFSFDVADLGFDQGTWKGPFDPDTGLVSLDDDTYRMTLRAKIAA HHHCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEE NHWDGTPDKAADILDLLAPPGTNVFIEDPCDMSITIGVSGKQPTAIYIALLKTGLLSLKP CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEHHHCHHCCCC ETVHINYAITSVDGDPIFGFDLENEYVSGFDVGAWSGTTIVEANQLDYTFSLDNSVLA CEEEEEEEEEECCCCEEEEEECCCCEECCEECCCCCCCEEEEECCCEEEEECCCCCCC >Mature Secondary Structure ADLDDYTSLITSEHQPRPKFMALVGALVSPLVDQMNVVASMPALFDLDNAVGDQLDKVG CCHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHCCCHHHHHHHHHHH EWVGLSRQVSTPLIGVYFSFDVADLGFDQGTWKGPFDPDTGLVSLDDDTYRMTLRAKIAA HHHCCCCCCCCCEEEEEEEEEHHHCCCCCCCCCCCCCCCCCEEEECCCCEEEEEEEEEEE NHWDGTPDKAADILDLLAPPGTNVFIEDPCDMSITIGVSGKQPTAIYIALLKTGLLSLKP CCCCCCCHHHHHHHHHHCCCCCEEEEECCCCEEEEEEECCCCCCEEEEEEHHHCHHCCCC ETVHINYAITSVDGDPIFGFDLENEYVSGFDVGAWSGTTIVEANQLDYTFSLDNSVLA CEEEEEEEEEECCCCEEEEEECCCCEECCEECCCCCCCEEEEECCCEEEEECCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA