| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027193
Identifier: 238027193
GI number: 238027193
Start: 1728141
End: 1729328
Strand: Direct
Name: 238027193
Synonym: bglu_1g15790
Alternate gene names: NA
Gene position: 1728141-1729328 (Clockwise)
Preceding gene: 238027192
Following gene: 238027194
Centisome position: 44.24
GC content: 64.65
Gene sequence:
>1188_bases GTGACGACGCTCCTTACCACCGTCGCGCCGACTATCAGCGCGGCCGGCATTTCGGCGCCGACGTTAGCGGACATCTACGC CTGGTTGCAGAGCCAGGTGCAGGCGATCTATGGCGCGGACATCTACATCGACCCGGACAGCCAGGATGGCCAGTTGCTCG CCGTTTTCGCGCGGGCGATCGCCGACAGCAATTCGGTCGCGATCGGCGTCTACAACTCGTTCAGCCCGTCCAAGGCGGTC GGTACGGCACTGTCGAGCAACGTGAAGATCAACGGCATTCAGCGTGAGGCGTCGAGCTACTCGAGCGCGGACCTGGCGCT GGGCGGCCAGGCCGGTACGACGATCACGAACGGCATCGCGAAGGACGCGAACAACTACCAATGGGCGCTGCCAGCCAGCG TGACGATTCCGCCGGCCGGCACGATCACCGTAACGGCGACCTGCACGACGATCGGTGCGATCACCGCACCGGCCAGTACG ATCGACCAGATCGGCACCCCGACGCGCGGCTGGCAGACGGTCACGAATCCGTCCGATGCAGCACCAGGCGCGCCCGTCGA ATCAGATCCGGCGCTGCGCGCGCGCCAGACTGTATCGACGGCACTGCCGTCGCAAACCGTGCTCGACGGGATCGTCGGCG CGGTGGCCAACCTACCAGGCGTGACGCGGTATCGAGCCTATGAGAACGACACGAGCGATACCGACGCGAACGGTATTCCC GGGCACCGGATCGCGCTGGTCGTCGAAGGCGGCGATGCAACGGCGATCGCCAATGCGGTGGCCGTAAAGAAGACACCAGG AGGCGGGACGTATGGCACGACGACGATCGTCACGACGAACCGCTACGGCATGCCTGTTCCGATCAACTTTTTCAGGCCGA CGGATGCGCCAATTTCGGCGGTCGTATCGATCCGTCCACTGACCGGCTACACCACTGCGGTCAGCGACGCGATACAGACC GCGATCGCTGCCTATGTAAATGGCGTTGAGATCGGTGGTGGTGCGGCAGCGGCCGTGGAATGGGACGACTGCATTGCAGC GGCAAAAGCGATCGACGGAGGTTCCACGTTCAAGATCACCAGCTTGGTGCTGACCGGCCCGCGCGGCGCTGGCTCTCCGG ACGTCGCGTTGCTGTTCAACGAGTCGGCGTCGTGCAGCGCCGATCGGGTCACGATCACCACGGGGTAA
Upstream 100 bases:
>100_bases TCACGGACTACGCGAGCTCCTTCGACAGCATCAAGCGGAAGCTGACTGTCACCGTGACGATCAACACCTTCTACGGCAGC ACCACCATCGAGACCACCCT
Downstream 100 bases:
>100_bases GTGCCATGGCAGATCTCGACGATTACACCTCGCTGATCACGTCCGAGCACCAGCCCAGGCCGAAGTTTATGGCGCTCGTG GGCGCGCTGGTGTCGCCGCT
Product: putative bacteriophage protein
Products: NA
Alternate protein names: Baseplate J Family Protein; Phage Protein
Number of amino acids: Translated: 395; Mature: 394
Protein sequence:
>395_residues MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAV GTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPAST IDQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQT AIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG
Sequences:
>Translated_395_residues MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAV GTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPAST IDQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQT AIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG >Mature_394_residues TTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAVG TALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTI DQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIPG HRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQTA IAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG
Specific function: Unknown
COG id: COG3299
COG function: function code S; Uncharacterized homolog of phage Mu protein gp47
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 39883; Mature: 39752
Theoretical pI: Translated: 4.33; Mature: 4.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.3 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.3 %Met (Mature Protein) 1.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAI CCEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH ADSNSVAIGVYNSFSPSKAVGTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIA CCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCEEECCCCCCEECCCHH KDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTIDQIGTPTRGWQTVTNPSDA CCCCCEEEECCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCC APGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISA CCEEEEEEECCCCEEHEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEE VVSIRPLTGYTTAVSDAIQTAIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKIT EEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEEEHHHHHHHHHHCCCCCEEEEE SLVLTGPRGAGSPDVALLFNESASCSADRVTITTG EEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECC >Mature Secondary Structure TTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAI CEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH ADSNSVAIGVYNSFSPSKAVGTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIA CCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCEEECCCCCCEECCCHH KDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTIDQIGTPTRGWQTVTNPSDA CCCCCEEEECCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCC APGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISA CCEEEEEEECCCCEEHEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEE VVSIRPLTGYTTAVSDAIQTAIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKIT EEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEEEHHHHHHHHHHCCCCCEEEEE SLVLTGPRGAGSPDVALLFNESASCSADRVTITTG EEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA