Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238027193

Identifier: 238027193

GI number: 238027193

Start: 1728141

End: 1729328

Strand: Direct

Name: 238027193

Synonym: bglu_1g15790

Alternate gene names: NA

Gene position: 1728141-1729328 (Clockwise)

Preceding gene: 238027192

Following gene: 238027194

Centisome position: 44.24

GC content: 64.65

Gene sequence:

>1188_bases
GTGACGACGCTCCTTACCACCGTCGCGCCGACTATCAGCGCGGCCGGCATTTCGGCGCCGACGTTAGCGGACATCTACGC
CTGGTTGCAGAGCCAGGTGCAGGCGATCTATGGCGCGGACATCTACATCGACCCGGACAGCCAGGATGGCCAGTTGCTCG
CCGTTTTCGCGCGGGCGATCGCCGACAGCAATTCGGTCGCGATCGGCGTCTACAACTCGTTCAGCCCGTCCAAGGCGGTC
GGTACGGCACTGTCGAGCAACGTGAAGATCAACGGCATTCAGCGTGAGGCGTCGAGCTACTCGAGCGCGGACCTGGCGCT
GGGCGGCCAGGCCGGTACGACGATCACGAACGGCATCGCGAAGGACGCGAACAACTACCAATGGGCGCTGCCAGCCAGCG
TGACGATTCCGCCGGCCGGCACGATCACCGTAACGGCGACCTGCACGACGATCGGTGCGATCACCGCACCGGCCAGTACG
ATCGACCAGATCGGCACCCCGACGCGCGGCTGGCAGACGGTCACGAATCCGTCCGATGCAGCACCAGGCGCGCCCGTCGA
ATCAGATCCGGCGCTGCGCGCGCGCCAGACTGTATCGACGGCACTGCCGTCGCAAACCGTGCTCGACGGGATCGTCGGCG
CGGTGGCCAACCTACCAGGCGTGACGCGGTATCGAGCCTATGAGAACGACACGAGCGATACCGACGCGAACGGTATTCCC
GGGCACCGGATCGCGCTGGTCGTCGAAGGCGGCGATGCAACGGCGATCGCCAATGCGGTGGCCGTAAAGAAGACACCAGG
AGGCGGGACGTATGGCACGACGACGATCGTCACGACGAACCGCTACGGCATGCCTGTTCCGATCAACTTTTTCAGGCCGA
CGGATGCGCCAATTTCGGCGGTCGTATCGATCCGTCCACTGACCGGCTACACCACTGCGGTCAGCGACGCGATACAGACC
GCGATCGCTGCCTATGTAAATGGCGTTGAGATCGGTGGTGGTGCGGCAGCGGCCGTGGAATGGGACGACTGCATTGCAGC
GGCAAAAGCGATCGACGGAGGTTCCACGTTCAAGATCACCAGCTTGGTGCTGACCGGCCCGCGCGGCGCTGGCTCTCCGG
ACGTCGCGTTGCTGTTCAACGAGTCGGCGTCGTGCAGCGCCGATCGGGTCACGATCACCACGGGGTAA

Upstream 100 bases:

>100_bases
TCACGGACTACGCGAGCTCCTTCGACAGCATCAAGCGGAAGCTGACTGTCACCGTGACGATCAACACCTTCTACGGCAGC
ACCACCATCGAGACCACCCT

Downstream 100 bases:

>100_bases
GTGCCATGGCAGATCTCGACGATTACACCTCGCTGATCACGTCCGAGCACCAGCCCAGGCCGAAGTTTATGGCGCTCGTG
GGCGCGCTGGTGTCGCCGCT

Product: putative bacteriophage protein

Products: NA

Alternate protein names: Baseplate J Family Protein; Phage Protein

Number of amino acids: Translated: 395; Mature: 394

Protein sequence:

>395_residues
MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAV
GTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPAST
IDQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP
GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQT
AIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG

Sequences:

>Translated_395_residues
MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAV
GTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPAST
IDQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP
GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQT
AIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG
>Mature_394_residues
TTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAIADSNSVAIGVYNSFSPSKAVG
TALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIAKDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTI
DQIGTPTRGWQTVTNPSDAAPGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIPG
HRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISAVVSIRPLTGYTTAVSDAIQTA
IAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKITSLVLTGPRGAGSPDVALLFNESASCSADRVTITTG

Specific function: Unknown

COG id: COG3299

COG function: function code S; Uncharacterized homolog of phage Mu protein gp47

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39883; Mature: 39752

Theoretical pI: Translated: 4.33; Mature: 4.33

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
0.5 %Met     (Translated Protein)
1.3 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
0.3 %Met     (Mature Protein)
1.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAI
CCEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
ADSNSVAIGVYNSFSPSKAVGTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIA
CCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCEEECCCCCCEECCCHH
KDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTIDQIGTPTRGWQTVTNPSDA
CCCCCEEEECCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCC
APGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISA
CCEEEEEEECCCCEEHEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEE
VVSIRPLTGYTTAVSDAIQTAIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKIT
EEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEEEHHHHHHHHHHCCCCCEEEEE
SLVLTGPRGAGSPDVALLFNESASCSADRVTITTG
EEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECC
>Mature Secondary Structure 
TTLLTTVAPTISAAGISAPTLADIYAWLQSQVQAIYGADIYIDPDSQDGQLLAVFARAI
CEEEEHHCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCEEEECCCCCCCHHHHHHHHHH
ADSNSVAIGVYNSFSPSKAVGTALSSNVKINGIQREASSYSSADLALGGQAGTTITNGIA
CCCCCEEEEEECCCCCHHHHHHHHHCCEEEEEEEHHHCCCCCCCEEECCCCCCEECCCHH
KDANNYQWALPASVTIPPAGTITVTATCTTIGAITAPASTIDQIGTPTRGWQTVTNPSDA
CCCCCEEEECCCEEEECCCCCEEEEEEEEEEECCCCCHHHHHHCCCCCCCCEEECCCCCC
APGAPVESDPALRARQTVSTALPSQTVLDGIVGAVANLPGVTRYRAYENDTSDTDANGIP
CCCCCCCCCCCHHHHHHHHHHCCHHHHHHHHHHHHHCCCCCEEEEEECCCCCCCCCCCCC
GHRIALVVEGGDATAIANAVAVKKTPGGGTYGTTTIVTTNRYGMPVPINFFRPTDAPISA
CCEEEEEEECCCCEEHEEEEEEEECCCCCCCCCEEEEEECCCCCCCEEEEECCCCCCCEE
VVSIRPLTGYTTAVSDAIQTAIAAYVNGVEIGGGAAAAVEWDDCIAAAKAIDGGSTFKIT
EEEEECCCCCHHHHHHHHHHHHHHHHCCEEECCCEEEEEEHHHHHHHHHHCCCCCEEEEE
SLVLTGPRGAGSPDVALLFNESASCSADRVTITTG
EEEEECCCCCCCCCEEEEECCCCCCCCCEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA