| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027195
Identifier: 238027195
GI number: 238027195
Start: 1730079
End: 1731095
Strand: Direct
Name: 238027195
Synonym: bglu_1g15810
Alternate gene names: NA
Gene position: 1730079-1731095 (Clockwise)
Preceding gene: 238027194
Following gene: 238027196
Centisome position: 44.29
GC content: 68.24
Gene sequence:
>1017_bases GTGGCTATCCAGAATGACTTTCTGCCGTTCGCCGTCGGCCCGGGCGCGAACGTGCTATCGCAGTCCTCTTATGAGGTGCT GGCGGCGCTTGCGAGCGGCTTCATGACGGGCACCGCGCAGTCGGCTGCATGCAACAAGGTCTGGCGTCAAAGCACCGTGA TGGCTGCCGTCATGGCGGCGTTCATCGTCGAGCGCACTGGACAGCCGGTGGTCGATGATGGCACGACCGCCACTATCCTC GCGAATCTGCTTGCGTCGACCGCTGCCGCCAATGGCGACGCGACGAAGCTGTTTCAGGTCGAGACGCCGGCCGCTGGCGA CAACAGCAACAACGCGGCGTCGACTGCGTTCGTGCAGGGCTTCGCCGGCGGTCGCAAGATCGTCATCCTCTCGGCAACGA ACTGGACCGTTCCGGCGGGCGTGACCACCATCTGGATATCGGCATGCGGGGGCGGCGGGGGCGGCGCGGGATCGCCGAAC ATCCCGGCTAACAATATCGTCGCGGGAGGCGGGGGGGGCGGCGCAGGCGACCCAGTACAACGCTACCAGATGGCGGTCAC GCCCGGCCAGGTGTTGTCGTGCGTGCCTGGCGCTGGAGGCGTTGCGGGTGCAGTTGGAGGCGCCGGCGGCAACGGCGGCA ACACCACGGTTGGAAGCCTAACACTTACGGCGGGGGCAGGTGGTCAGGTTGGCGGCAGTGGGGCGCCGACGCAGGCATGG CCCGGCCAACCCGGAGGAAACGGCTTCCCGAACGGCGAGTACGGTCAGGACACGTCCCAGTACGGGCCGGGCGCGACAGG CGGCCGCGGCGGTGGTGGCCCGTTCGGCGCGAGCGGCGCACCGGGCCGTGGTGCAATCGGTGGTGTCGGCAGCCTGATTC CGCCGTCTGCCTCCTACGGCTACGGCGTCGGTGGGTCGGGCGCGGGTGGATGTTACGGCCCCACCACTGCGACGGGCACT ACGAGCGGCAGTGTTGGCGCAGCTGGCATGCCAGGCATCATCATCATCGAGTACTGA
Upstream 100 bases:
>100_bases TCGGGCACCACGATCGTCGAAGCCAATCAGCTCGACTACACCTTCTCCCTCGACAACTCGGTGCTCGCGTAGCGGGCCCG GCCATCCCATCGGAGTTTCA
Downstream 100 bases:
>100_bases GGAGCGACACATGGCGCGCTACGCCTATTTCGACAAGCAAGTGAAAGCGGTATTGGGCTGGATAGACACCGTCGCGTACA ACTACGCAGAAGACCCAGTG
Product: Tail fiber protein
Products: NA
Alternate protein names: Phage Tail Fiber Protein; Fels-2 Prophage Pin; Side Tail Fiber Protein; Bacteriophage Tail Protein; Tail Fiber Protein
Number of amino acids: Translated: 338; Mature: 337
Protein sequence:
>338_residues MAIQNDFLPFAVGPGANVLSQSSYEVLAALASGFMTGTAQSAACNKVWRQSTVMAAVMAAFIVERTGQPVVDDGTTATIL ANLLASTAAANGDATKLFQVETPAAGDNSNNAASTAFVQGFAGGRKIVILSATNWTVPAGVTTIWISACGGGGGGAGSPN IPANNIVAGGGGGGAGDPVQRYQMAVTPGQVLSCVPGAGGVAGAVGGAGGNGGNTTVGSLTLTAGAGGQVGGSGAPTQAW PGQPGGNGFPNGEYGQDTSQYGPGATGGRGGGGPFGASGAPGRGAIGGVGSLIPPSASYGYGVGGSGAGGCYGPTTATGT TSGSVGAAGMPGIIIIEY
Sequences:
>Translated_338_residues MAIQNDFLPFAVGPGANVLSQSSYEVLAALASGFMTGTAQSAACNKVWRQSTVMAAVMAAFIVERTGQPVVDDGTTATIL ANLLASTAAANGDATKLFQVETPAAGDNSNNAASTAFVQGFAGGRKIVILSATNWTVPAGVTTIWISACGGGGGGAGSPN IPANNIVAGGGGGGAGDPVQRYQMAVTPGQVLSCVPGAGGVAGAVGGAGGNGGNTTVGSLTLTAGAGGQVGGSGAPTQAW PGQPGGNGFPNGEYGQDTSQYGPGATGGRGGGGPFGASGAPGRGAIGGVGSLIPPSASYGYGVGGSGAGGCYGPTTATGT TSGSVGAAGMPGIIIIEY >Mature_337_residues AIQNDFLPFAVGPGANVLSQSSYEVLAALASGFMTGTAQSAACNKVWRQSTVMAAVMAAFIVERTGQPVVDDGTTATILA NLLASTAAANGDATKLFQVETPAAGDNSNNAASTAFVQGFAGGRKIVILSATNWTVPAGVTTIWISACGGGGGGAGSPNI PANNIVAGGGGGGAGDPVQRYQMAVTPGQVLSCVPGAGGVAGAVGGAGGNGGNTTVGSLTLTAGAGGQVGGSGAPTQAWP GQPGGNGFPNGEYGQDTSQYGPGATGGRGGGGPFGASGAPGRGAIGGVGSLIPPSASYGYGVGGSGAGGCYGPTTATGTT SGSVGAAGMPGIIIIEY
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 31807; Mature: 31676
Theoretical pI: Translated: 4.49; Mature: 4.49
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 3.0 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 1.5 %Met (Mature Protein) 2.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAIQNDFLPFAVGPGANVLSQSSYEVLAALASGFMTGTAQSAACNKVWRQSTVMAAVMAA CCCCCCCCCEEECCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FIVERTGQPVVDDGTTATILANLLASTAAANGDATKLFQVETPAAGDNSNNAASTAFVQG HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH FAGGRKIVILSATNWTVPAGVTTIWISACGGGGGGAGSPNIPANNIVAGGGGGGAGDPVQ CCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCHHH RYQMAVTPGQVLSCVPGAGGVAGAVGGAGGNGGNTTVGSLTLTAGAGGQVGGSGAPTQAW HEEEECCCCHHHEECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC PGQPGGNGFPNGEYGQDTSQYGPGATGGRGGGGPFGASGAPGRGAIGGVGSLIPPSASYG CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGVGGSGAGGCYGPTTATGTTSGSVGAAGMPGIIIIEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC >Mature Secondary Structure AIQNDFLPFAVGPGANVLSQSSYEVLAALASGFMTGTAQSAACNKVWRQSTVMAAVMAA CCCCCCCCEEECCCCHHHHCHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH FIVERTGQPVVDDGTTATILANLLASTAAANGDATKLFQVETPAAGDNSNNAASTAFVQG HHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCCCCCCCCCHHHHHHHH FAGGRKIVILSATNWTVPAGVTTIWISACGGGGGGAGSPNIPANNIVAGGGGGGAGDPVQ CCCCCEEEEEEECCCCCCCCCEEEEEEECCCCCCCCCCCCCCCCCEEECCCCCCCCCHHH RYQMAVTPGQVLSCVPGAGGVAGAVGGAGGNGGNTTVGSLTLTAGAGGQVGGSGAPTQAW HEEEECCCCHHHEECCCCCCHHHCCCCCCCCCCCCEEEEEEEECCCCCCCCCCCCCCCCC PGQPGGNGFPNGEYGQDTSQYGPGATGGRGGGGPFGASGAPGRGAIGGVGSLIPPSASYG CCCCCCCCCCCCCCCCCCHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC YGVGGSGAGGCYGPTTATGTTSGSVGAAGMPGIIIIEY CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA