| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027166
Identifier: 238027166
GI number: 238027166
Start: 1706836
End: 1707492
Strand: Direct
Name: 238027166
Synonym: bglu_1g15520
Alternate gene names: NA
Gene position: 1706836-1707492 (Clockwise)
Preceding gene: 238027165
Following gene: 238027167
Centisome position: 43.69
GC content: 65.45
Gene sequence:
>657_bases ATGGCGAAGCCGCTGAGACTGCCTGGGCGCACGTCGGCGCGGCCCGCGCCGCCCGACATTCTCTTCGACGAATCGAACTG GCTGAGCCCCATCGCGCCGGCCGACGGCCTCGCCGAATGGGTGCAGGCGACCTTCCTCGCCGATGGCGCGCCGCTGCGCA ACCCCGATCATGGGCACCTCGTCGACGCCGACATTGCCTACCTCTGGGCTGCCGTCGGGAACACGCGCCAGATGCGCCGC GTGATCGGCCAGTGCGAGGAGGTCATGATCCGCGCCGGTGGCTGGCAGCGTGCCAGGCAGGAGCAGCAGTTCTGCGAGTG GTTCGGCCACGTGCCCGCGTTCCTCATCACACTCGACGCGCACTATGCGCGCGAGTGCAGTGATCTGCAGTTCTGCGCGC TGGTGGAGCACGAGCTGATGCATATCGCGCAGAAAACGGATGAGTTCGGCGCCCCAGCCTTCACGAAGGATGGGTTCCCC AAGCTGGGCCTCCGAGCGCATGACGTTGAAGAATTCGTTGGGATCGTGGAGCGATACGGTGTTGGCGATCGCGACGGACC TATTGCCAAGATGGTCAGGGCCGCTAACGCGGGCCCGACGATTTCGTCAGTATCTGTCGCACACGCGTGCGGGACATGCA TGTTGAGGTCGGCATGA
Upstream 100 bases:
>100_bases TCCGAGCGCTGAAGATCGCAATCGGCATGCTGGCAGCGGTGTCGCTTGGCGCGATCGCTCTCTCCATTCGCGTGCGCGGC CGCCGTTAAGCCGACCGATC
Downstream 100 bases:
>100_bases ACGAAGAGCAGTGGCGTGTCATCGGCGAGTGGCCGAACTACGCGGTCAGCAGTCACGGGCGGATCAAGCGGCTTACGACC AGAAACAGCGGCGTAGCCGG
Product: putative transposase
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 218; Mature: 217
Protein sequence:
>218_residues MAKPLRLPGRTSARPAPPDILFDESNWLSPIAPADGLAEWVQATFLADGAPLRNPDHGHLVDADIAYLWAAVGNTRQMRR VIGQCEEVMIRAGGWQRARQEQQFCEWFGHVPAFLITLDAHYARECSDLQFCALVEHELMHIAQKTDEFGAPAFTKDGFP KLGLRAHDVEEFVGIVERYGVGDRDGPIAKMVRAANAGPTISSVSVAHACGTCMLRSA
Sequences:
>Translated_218_residues MAKPLRLPGRTSARPAPPDILFDESNWLSPIAPADGLAEWVQATFLADGAPLRNPDHGHLVDADIAYLWAAVGNTRQMRR VIGQCEEVMIRAGGWQRARQEQQFCEWFGHVPAFLITLDAHYARECSDLQFCALVEHELMHIAQKTDEFGAPAFTKDGFP KLGLRAHDVEEFVGIVERYGVGDRDGPIAKMVRAANAGPTISSVSVAHACGTCMLRSA >Mature_217_residues AKPLRLPGRTSARPAPPDILFDESNWLSPIAPADGLAEWVQATFLADGAPLRNPDHGHLVDADIAYLWAAVGNTRQMRRV IGQCEEVMIRAGGWQRARQEQQFCEWFGHVPAFLITLDAHYARECSDLQFCALVEHELMHIAQKTDEFGAPAFTKDGFPK LGLRAHDVEEFVGIVERYGVGDRDGPIAKMVRAANAGPTISSVSVAHACGTCMLRSA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 23920; Mature: 23789
Theoretical pI: Translated: 6.08; Mature: 6.08
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.8 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.5 %Cys+Met (Translated Protein) 2.8 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MAKPLRLPGRTSARPAPPDILFDESNWLSPIAPADGLAEWVQATFLADGAPLRNPDHGHL CCCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCE VDADIAYLWAAVGNTRQMRRVIGQCEEVMIRAGGWQRARQEQQFCEWFGHVPAFLITLDA EHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHEEHHHCH HYARECSDLQFCALVEHELMHIAQKTDEFGAPAFTKDGFPKLGLRAHDVEEFVGIVERYG HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC VGDRDGPIAKMVRAANAGPTISSVSVAHACGTCMLRSA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC >Mature Secondary Structure AKPLRLPGRTSARPAPPDILFDESNWLSPIAPADGLAEWVQATFLADGAPLRNPDHGHL CCCCCCCCCCCCCCCCCCEEECCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCCCE VDADIAYLWAAVGNTRQMRRVIGQCEEVMIRAGGWQRARQEQQFCEWFGHVPAFLITLDA EHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHCHHHEEHHHCH HYARECSDLQFCALVEHELMHIAQKTDEFGAPAFTKDGFPKLGLRAHDVEEFVGIVERYG HHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHCC VGDRDGPIAKMVRAANAGPTISSVSVAHACGTCMLRSA CCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA