| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238027165
Identifier: 238027165
GI number: 238027165
Start: 1705814
End: 1706419
Strand: Direct
Name: 238027165
Synonym: bglu_1g15510
Alternate gene names: NA
Gene position: 1705814-1706419 (Clockwise)
Preceding gene: 238027164
Following gene: 238027166
Centisome position: 43.67
GC content: 67.66
Gene sequence:
>606_bases GTGAGCGAGATCGTGTTCAAGTCGGCATTCGACGCCGTGCGTTTCGCGCTCTGCTACTCGTCGCAGCAGTTCGGCGAGAC GATCATGGCGAAGCGCATGCGCGGCCCGGGCGGCGGGTCCGGGATGGGCCTGGTTGGGCTGGATGGCGCGGGCCAGGCCG GCATGATCCGCAGTGAACTCGAAAAACTGCCCGAGCTGCACCTCTGCGTGGTCGTGGCGCGCGCCGCCCCGCAGCAGCTC GCGTGCGAGTGTGGACATCCGTGCTGCTCGCGCTGGCGGCCGAACATCGAGTGGCAGGCGGCGATCTCGTGGCTGACGGA CGCCTCGGCCGCGTACTGCTCCGGGTTCTCGCACTACCGGGTGCGGCGGGCGATCGTTGAGAAGGTGTTCGGCGTGAAGC GCAACCTCGAGGACATCGCGAAGGATTGTGACGCGAACGTGAAGACGGTCAGCAACCACAACGCCGCGGTGCGGCGATGG ATCGACGGGAACAAGAAGTCTGCTGTGGCCGCCGAGCGGGTGGGCGTGTCCGATGTGGCGTGGAGCGCGGTCGAACGGCG CTTCTACGAACTCGGGCTACTCGAGCAGGGCGACGTCGCGGCGTAG
Upstream 100 bases:
>100_bases TCGACACGCGCATCCGCCCGGACTTCACGAGCAACCTGACCGGCTACGTGCGCGACCTCGACACGCACCGCGCGCTGGCG ATGACGACGCGGGGTGTGCG
Downstream 100 bases:
>100_bases CGCGCGGCGCCCCGCCGCGAAAATTTCTTGCACTTGCCGAAAAAACCGGCAATAATCCGCGAAATTCGATACACGTCGAA GTTGCGACCAAAGCCCGCTG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 201; Mature: 200
Protein sequence:
>201_residues MSEIVFKSAFDAVRFALCYSSQQFGETIMAKRMRGPGGGSGMGLVGLDGAGQAGMIRSELEKLPELHLCVVVARAAPQQL ACECGHPCCSRWRPNIEWQAAISWLTDASAAYCSGFSHYRVRRAIVEKVFGVKRNLEDIAKDCDANVKTVSNHNAAVRRW IDGNKKSAVAAERVGVSDVAWSAVERRFYELGLLEQGDVAA
Sequences:
>Translated_201_residues MSEIVFKSAFDAVRFALCYSSQQFGETIMAKRMRGPGGGSGMGLVGLDGAGQAGMIRSELEKLPELHLCVVVARAAPQQL ACECGHPCCSRWRPNIEWQAAISWLTDASAAYCSGFSHYRVRRAIVEKVFGVKRNLEDIAKDCDANVKTVSNHNAAVRRW IDGNKKSAVAAERVGVSDVAWSAVERRFYELGLLEQGDVAA >Mature_200_residues SEIVFKSAFDAVRFALCYSSQQFGETIMAKRMRGPGGGSGMGLVGLDGAGQAGMIRSELEKLPELHLCVVVARAAPQQLA CECGHPCCSRWRPNIEWQAAISWLTDASAAYCSGFSHYRVRRAIVEKVFGVKRNLEDIAKDCDANVKTVSNHNAAVRRWI DGNKKSAVAAERVGVSDVAWSAVERRFYELGLLEQGDVAA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21911; Mature: 21780
Theoretical pI: Translated: 8.21; Mature: 8.21
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
4.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 6.5 %Cys+Met (Translated Protein) 4.0 %Cys (Mature Protein) 2.0 %Met (Mature Protein) 6.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSEIVFKSAFDAVRFALCYSSQQFGETIMAKRMRGPGGGSGMGLVGLDGAGQAGMIRSEL CCCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH EKLPELHLCVVVARAAPQQLACECGHPCCSRWRPNIEWQAAISWLTDASAAYCSGFSHYR HHCCHHHHHHHHHHHCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHCCHHHHH VRRAIVEKVFGVKRNLEDIAKDCDANVKTVSNHNAAVRRWIDGNKKSAVAAERVGVSDVA HHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHCCHHHHH WSAVERRFYELGLLEQGDVAA HHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SEIVFKSAFDAVRFALCYSSQQFGETIMAKRMRGPGGGSGMGLVGLDGAGQAGMIRSEL CCHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCEEEEECCCCCCHHHHHHH EKLPELHLCVVVARAAPQQLACECGHPCCSRWRPNIEWQAAISWLTDASAAYCSGFSHYR HHCCHHHHHHHHHHHCHHHHHHHCCCHHHHCCCCCCHHHHHHHHHHHCHHHHHCCHHHHH VRRAIVEKVFGVKRNLEDIAKDCDANVKTVSNHNAAVRRWIDGNKKSAVAAERVGVSDVA HHHHHHHHHHHHHCCHHHHHHHCCCCCEEECCCHHHHHHHHCCCCHHHHHHHHCCHHHHH WSAVERRFYELGLLEQGDVAA HHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA