Click here to switch to the map view.

The map label for this gene is yosQ [H]

Identifier: 238027167

GI number: 238027167

Start: 1707489

End: 1707989

Strand: Direct

Name: yosQ [H]

Synonym: bglu_1g15530

Alternate gene names: 238027167

Gene position: 1707489-1707989 (Clockwise)

Preceding gene: 238027166

Following gene: 238027168

Centisome position: 43.71

GC content: 60.48

Gene sequence:

>501_bases
ATGAACGAAGAGCAGTGGCGTGTCATCGGCGAGTGGCCGAACTACGCGGTCAGCAGTCACGGGCGGATCAAGCGGCTTAC
GACCAGAAACAGCGGCGTAGCCGGCAGAGTGCTCGCCACCTTCTTGGTTTGCGGCTACCCGTCGGTGAATCTATCTCGTC
CCGGAAAGCGCCAGTCAGTTCGAATCCATCGGATCGTCGCCGACGCGTTCCTCGATCGAACAGCCGGAGCGTCGGAGGTG
AATCACATCGACGCCGACCGCGCCAATAACCATGTCTCGAATCTGGAGTGGGTGTCGGCGAGCGGAAATCGGCTGCACGC
CTATCGAACTGGCGGCTTATCCGCAGTTGGAGAGCGGAATGGCTACTCTAAGCTGACCGAATGCGCGGTGCGCGAGATTC
GAGAACTTTCGAGAAGTGAGCAGAGCCTCGCTGAGAAGCACCAGGTTTCCGTCCGCACGATTCGCGACGTGCGAGCTCGT
CGGACGTGGGCCCACATCTGA

Upstream 100 bases:

>100_bases
ACGGACCTATTGCCAAGATGGTCAGGGCCGCTAACGCGGGCCCGACGATTTCGTCAGTATCTGTCGCACACGCGTGCGGG
ACATGCATGTTGAGGTCGGC

Downstream 100 bases:

>100_bases
CGCGCCGCGTAACCCTCCCGCATTCCCGCCATGGCAGCACTCCCCGACAACATCAAGGTGTTCGTCACGCAGGCGCTCGC
CTGCTTCGACACGCCCACGC

Product: HNH endonuclease family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 166; Mature: 166

Protein sequence:

>166_residues
MNEEQWRVIGEWPNYAVSSHGRIKRLTTRNSGVAGRVLATFLVCGYPSVNLSRPGKRQSVRIHRIVADAFLDRTAGASEV
NHIDADRANNHVSNLEWVSASGNRLHAYRTGGLSAVGERNGYSKLTECAVREIRELSRSEQSLAEKHQVSVRTIRDVRAR
RTWAHI

Sequences:

>Translated_166_residues
MNEEQWRVIGEWPNYAVSSHGRIKRLTTRNSGVAGRVLATFLVCGYPSVNLSRPGKRQSVRIHRIVADAFLDRTAGASEV
NHIDADRANNHVSNLEWVSASGNRLHAYRTGGLSAVGERNGYSKLTECAVREIRELSRSEQSLAEKHQVSVRTIRDVRAR
RTWAHI
>Mature_166_residues
MNEEQWRVIGEWPNYAVSSHGRIKRLTTRNSGVAGRVLATFLVCGYPSVNLSRPGKRQSVRIHRIVADAFLDRTAGASEV
NHIDADRANNHVSNLEWVSASGNRLHAYRTGGLSAVGERNGYSKLTECAVREIRELSRSEQSLAEKHQVSVRTIRDVRAR
RTWAHI

Specific function: A possible homing endonuclease, it is entirely encoded within the yosP intron [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002711
- InterPro:   IPR003615 [H]

Pfam domain/function: PF01844 HNH [H]

EC number: NA

Molecular weight: Translated: 18657; Mature: 18657

Theoretical pI: Translated: 11.07; Mature: 11.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.8 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNEEQWRVIGEWPNYAVSSHGRIKRLTTRNSGVAGRVLATFLVCGYPSVNLSRPGKRQSV
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
RIHRIVADAFLDRTAGASEVNHIDADRANNHVSNLEWVSASGNRLHAYRTGGLSAVGERN
HHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
GYSKLTECAVREIRELSRSEQSLAEKHQVSVRTIRDVRARRTWAHI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure
MNEEQWRVIGEWPNYAVSSHGRIKRLTTRNSGVAGRVLATFLVCGYPSVNLSRPGKRQSV
CCCCCEEEEECCCCCCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCCCCCCCCCCHHH
RIHRIVADAFLDRTAGASEVNHIDADRANNHVSNLEWVSASGNRLHAYRTGGLSAVGERN
HHHHHHHHHHHHHCCCCCHHHHCCCHHCCCCCCCCEEEECCCCEEEEEECCCCCCCCCCC
GYSKLTECAVREIRELSRSEQSLAEKHQVSVRTIRDVRARRTWAHI
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9679200; 9384377 [H]