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The map label for this gene is yhbY [H]

Identifier: 238026782

GI number: 238026782

Start: 1250990

End: 1251535

Strand: Reverse

Name: yhbY [H]

Synonym: bglu_1g11400

Alternate gene names: 238026782

Gene position: 1251535-1250990 (Counterclockwise)

Preceding gene: 238026794

Following gene: 238026773

Centisome position: 32.04

GC content: 71.43

Gene sequence:

>546_bases
ATGCCTGCCCTTTCGCTTTCCCCCGCCGAGCGCTCCGCGCTGCGTTCGCAAGCCCATGCGCTCAAGCCCGTCGTGCTGAT
CGGCGCCGAAGGCCTGACCGACGCCGTGCTGGCCGAGATCAAGGTCCACCTGGCCGCCCACCAGTTGATCAAGATCCGCG
TGTTCGGCGACGATCGCGACGCCCGCATCGCGATCTACGAGGACATCTGCGAGCGCCTCGGCGCCGCGCCGATCCAGCAC
ATCGGCAAGCTGCTCGTGATCTGGCGCCCCGAGCAGGTCGAACCGGCCCCGAAGCGCGGCGCGCGCGGCGTGCCGAGCGC
GCGCGAGGCGGCCCGGCGCCTGCCCGCCGGCGAGCCGGAAACCAAGGGCCGCGCGCCGCGCGTGGTCAAGGTGGTCAAGC
ATTCGCCGGACGCGAGCCCGGTGCGCAAGCCGCGCGCCACCAAGGTGGTCGTGCGCGGCAACGAGCGCGTGACGGCGGGC
GGCACCGTGAAGCGCGCGAAAAAGCGCCAGCAAAGCGCGAAGCGCCCGTTCCAGAACGACAAATAA

Upstream 100 bases:

>100_bases
TATTCGCGCGGCGGACGCCTCGACAGCGTGCCAGCCGCGATTTTACGTGGTTTTCGCGCGCGCCCGTCCGGCGCGCCGTC
CTAGAGATTCCAGAGTTCCG

Downstream 100 bases:

>100_bases
GGAAACCCGGCCCGGCACCGGCGCCTCGCGGGCACGCGCCGGCCGCACTCAGCTGCGCGTGGCGCGCACCTCGTCCGCCC
CGGGCAGGATCCACACGAGC

Product: CRS1/YhbY domain-contain protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 181; Mature: 180

Protein sequence:

>181_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLAEIKVHLAAHQLIKIRVFGDDRDARIAIYEDICERLGAAPIQH
IGKLLVIWRPEQVEPAPKRGARGVPSAREAARRLPAGEPETKGRAPRVVKVVKHSPDASPVRKPRATKVVVRGNERVTAG
GTVKRAKKRQQSAKRPFQNDK

Sequences:

>Translated_181_residues
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLAEIKVHLAAHQLIKIRVFGDDRDARIAIYEDICERLGAAPIQH
IGKLLVIWRPEQVEPAPKRGARGVPSAREAARRLPAGEPETKGRAPRVVKVVKHSPDASPVRKPRATKVVVRGNERVTAG
GTVKRAKKRQQSAKRPFQNDK
>Mature_180_residues
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLAEIKVHLAAHQLIKIRVFGDDRDARIAIYEDICERLGAAPIQHI
GKLLVIWRPEQVEPAPKRGARGVPSAREAARRLPAGEPETKGRAPRVVKVVKHSPDASPVRKPRATKVVVRGNERVTAGG
TVKRAKKRQQSAKRPFQNDK

Specific function: Unknown

COG id: COG1534

COG function: function code J; Predicted RNA-binding protein containing KH domain, possibly ribosomal protein

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 CRM domain [H]

Homologues:

Organism=Escherichia coli, GI1789570, Length=87, Percent_Identity=45.9770114942529, Blast_Score=84, Evalue=8e-18,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR001890
- InterPro:   IPR017924
- ProDom:   PD010559 [H]

Pfam domain/function: PF01985 CRS1_YhbY [H]

EC number: NA

Molecular weight: Translated: 19714; Mature: 19583

Theoretical pI: Translated: 11.57; Mature: 11.57

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
1.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
0.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLAEIKVHLAAHQLIKIRVFGDDRD
CCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCC
ARIAIYEDICERLGAAPIQHIGKLLVIWRPEQVEPAPKRGARGVPSAREAARRLPAGEPE
CEEHHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
TKGRAPRVVKVVKHSPDASPVRKPRATKVVVRGNERVTAGGTVKRAKKRQQSAKRPFQND
CCCCCCHHHHEECCCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCC
K
C
>Mature Secondary Structure 
PALSLSPAERSALRSQAHALKPVVLIGAEGLTDAVLAEIKVHLAAHQLIKIRVFGDDRD
CCCCCCHHHHHHHHHHHHHCCCEEEECCCCCHHHHHHHHHHHHHHEEEEEEEEECCCCC
ARIAIYEDICERLGAAPIQHIGKLLVIWRPEQVEPAPKRGARGVPSAREAARRLPAGEPE
CEEHHHHHHHHHHCCCHHHHCCCEEEEECCCCCCCCCCCCCCCCCHHHHHHHHCCCCCCC
TKGRAPRVVKVVKHSPDASPVRKPRATKVVVRGNERVTAGGTVKRAKKRQQSAKRPFQND
CCCCCCHHHHEECCCCCCCCCCCCCCCEEEEECCCEEECCCHHHHHHHHHHHHHCCCCCC
K
C

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11206551; 11258796 [H]