| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is ppk [H]
Identifier: 238026794
GI number: 238026794
Start: 1264385
End: 1266448
Strand: Reverse
Name: ppk [H]
Synonym: bglu_1g11520
Alternate gene names: 238026794
Gene position: 1266448-1264385 (Counterclockwise)
Preceding gene: 238026796
Following gene: 238026782
Centisome position: 32.42
GC content: 67.15
Gene sequence:
>2064_bases ATGTCCACTCGCTATCCGCTGCTCAACCGTGAACTTGGCATTCTCGGCTTCAACGAGCGCGTCCTCGCGCAGGCGGCCGA CCCGCACGTGCCGCTGCTTGAACGACTGCGCTTCATCTGCATCACCAGCAGCAATCTCGACGAGTTCTTCGAGGTCCGCA TGGCCGGCCTCCAGGAGCAGATGCGCGACAACCCCGGAGCGCTGTCGCCGGACGGCATGTCGCTGCAGCACGTCTACGAC CTCGTGGTGGAGCGCGCGCAGCGGCTCGTCCACAAGCAGTACACGATGCTGCACGAAACCATCCTGCCCGCGCTCGAGAC CGAGGGCATCTATTTCCACGGCACCGACACCTGGAGCGAGGCGCAGCTCGAATGGGCGCGCAACTATTTCCTCGACGAAC TGCTGCCGGTGCTCACGCCGATCGGGCTCGATCCCGCGCATCCGTTCCCGCGCGTGCTGAACAAGAGCCTGAACTTCGTG GTGGAGCTGGAGGGCCGCGACGCGTTCGGCCGCCAGGCGCTGCTCGGCATCGTGCAGGCGCCGCGCGCGCTGCCGCGTCT GGTGCGCATGCCGCAGGCGCTGTCGGGCTTCCGCCACGGCTTCGTGCTGCTCAGCTCGCTGATGCAGCGCTTCGTCGGCG AACTGTTCCCGAAGCTGGTGGTGAAGAGCTGCAACCAGTTCCGCATCACGCGCAACAGCGAGCTGTTCGTCGACGAGGAC GAGATCACCAACCTGCGCGTGGCGCTGCAGGGCGAGCTGCCGGCGCGCCATCTCGGCAACGCGGTGCGCCTCGAAGTGTC GGCCGACACGCCCGCCCACATCGTGCGGCGCCTGCTCGACGAGAGCAGCCTCAACGACAAGGACTGCTACCGGGTCCACG GCGCCGTGAACCTGGTGCGCCTGATGCAGCTGCCCGACCTCGTGGACCTGCCCGAGCTGAAGTTCGTGCCGCACACGCCC TCCACGCCGGCCGCGGTCGCCAACACCACCTCGATGTTCACCGCGATCGATCGCGGCGACATCCTGCTGCATCACCCCTA CGAGAGCTTCCAGCCCGTGCTGGAGCTACTGCGCGAGGCCGCCAAGGACCCGCAGGTGGTGGCCATCAAGCAGACCATCT ATCGCACCGGCAACGATTCGCCGCTGATGGACGCGCTGATGGAAGCCGCGCGCAACGGCAAGGAAGTGACGGTGGTGGTC GAGCTGCTGGCGCGCTTCGACGAGGAAACCAACATCAACTGGGCCTCGCGGCTCGAGGCGGTGGGCGCGCATGTGGTGTA CGGCGTGGTCGGCCACAAGTGCCATGCCAAGATGATGCTGATCGTGCGCCGCGAGAAGCGCGGCGGCAAGACCGTGCTGC GCCGCTACACGCACCTCGGCACCGGCAACTACCATCCGCGCACCGCACGCCTCTATACCGACTTCGGCTTGATGACGGCC GACCAGAAGATTTGCGAGGACGTCCATCATGTGTTCCAGCAGCTCACCGGCATCGGCGGCGAGCTGAAGCTCCATGAGCT CTGGCAGTCGCCGTTCACGCTGCACCCGCTGTTGATCGACGGCATCCGCAACGAAGTCGCGAACGCGCGGGCCGGTAAGC GCGCGCGCATCGTCGCGAAGATGAACGCGCTGCTGGAGCCGTCGGTGATCGCCGAGCTCTACGAGGCCTCGCAGGCGGGC GTCAAGGTCGACCTGATCGTGCGCGGCGTGTGCGCGCTGCAGCCGGGCGTGCCGGGGCTGTCGGAGAACATCACCGTGCG CTCGGTGATCGGCCGCTTCCTCGAGCACCACCGGATCTTCTACTTCCACGCGAGCGGCGCCGAGCGCGTCTACCTGTCGA GTGCCGACTGGATGGACCGCAACCTGTTCCGCCGCGTCGAGGTCGCGTTCCCGATCCACGACCGCAAGCTCAAGCGCCGC GTGATCGCCGAGGGCCTCTCGGTGTTCCTCGGCGACAACCAGTCGGCCTGGCTGATGCAGAGCGACGGCCACTACAAGCG CCGCCGCGCCGGCAAGACGCCGCGCAGCGCGCAGCTCGGGCTGCTGGAAAAATTCGGCGGCTGA
Upstream 100 bases:
>100_bases AAGTACAAATTCGTCATCAAGATGTCATCGAACCGTGAGAATTTCCGAACTTCCGTTCCTCCCCGCTCCACCCGACTTCG AACCGCCATCCCCGCTGCCG
Downstream 100 bases:
>100_bases CGGCGGCCGCCGATGCCGTGCCGGGCGCCGCCGCGGCCGCGTCGAAGCAAAGGCCGCCCGGGGGTGAACCGGGCGGCCTT GTTCGTCTGGCCGGCCTCAC
Product: polyphosphate kinase
Products: NA
Alternate protein names: ATP-polyphosphate phosphotransferase; Polyphosphoric acid kinase [H]
Number of amino acids: Translated: 687; Mature: 686
Protein sequence:
>687_residues MSTRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALSPDGMSLQHVYD LVVERAQRLVHKQYTMLHETILPALETEGIYFHGTDTWSEAQLEWARNYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFV VELEGRDAFGRQALLGIVQAPRALPRLVRMPQALSGFRHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPAHIVRRLLDESSLNDKDCYRVHGAVNLVRLMQLPDLVDLPELKFVPHTP STPAAVANTTSMFTAIDRGDILLHHPYESFQPVLELLREAAKDPQVVAIKQTIYRTGNDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWASRLEAVGAHVVYGVVGHKCHAKMMLIVRREKRGGKTVLRRYTHLGTGNYHPRTARLYTDFGLMTA DQKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPLLIDGIRNEVANARAGKRARIVAKMNALLEPSVIAELYEASQAG VKVDLIVRGVCALQPGVPGLSENITVRSVIGRFLEHHRIFYFHASGAERVYLSSADWMDRNLFRRVEVAFPIHDRKLKRR VIAEGLSVFLGDNQSAWLMQSDGHYKRRRAGKTPRSAQLGLLEKFGG
Sequences:
>Translated_687_residues MSTRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALSPDGMSLQHVYD LVVERAQRLVHKQYTMLHETILPALETEGIYFHGTDTWSEAQLEWARNYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFV VELEGRDAFGRQALLGIVQAPRALPRLVRMPQALSGFRHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED EITNLRVALQGELPARHLGNAVRLEVSADTPAHIVRRLLDESSLNDKDCYRVHGAVNLVRLMQLPDLVDLPELKFVPHTP STPAAVANTTSMFTAIDRGDILLHHPYESFQPVLELLREAAKDPQVVAIKQTIYRTGNDSPLMDALMEAARNGKEVTVVV ELLARFDEETNINWASRLEAVGAHVVYGVVGHKCHAKMMLIVRREKRGGKTVLRRYTHLGTGNYHPRTARLYTDFGLMTA DQKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPLLIDGIRNEVANARAGKRARIVAKMNALLEPSVIAELYEASQAG VKVDLIVRGVCALQPGVPGLSENITVRSVIGRFLEHHRIFYFHASGAERVYLSSADWMDRNLFRRVEVAFPIHDRKLKRR VIAEGLSVFLGDNQSAWLMQSDGHYKRRRAGKTPRSAQLGLLEKFGG >Mature_686_residues STRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQMRDNPGALSPDGMSLQHVYDL VVERAQRLVHKQYTMLHETILPALETEGIYFHGTDTWSEAQLEWARNYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVV ELEGRDAFGRQALLGIVQAPRALPRLVRMPQALSGFRHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDEDE ITNLRVALQGELPARHLGNAVRLEVSADTPAHIVRRLLDESSLNDKDCYRVHGAVNLVRLMQLPDLVDLPELKFVPHTPS TPAAVANTTSMFTAIDRGDILLHHPYESFQPVLELLREAAKDPQVVAIKQTIYRTGNDSPLMDALMEAARNGKEVTVVVE LLARFDEETNINWASRLEAVGAHVVYGVVGHKCHAKMMLIVRREKRGGKTVLRRYTHLGTGNYHPRTARLYTDFGLMTAD QKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPLLIDGIRNEVANARAGKRARIVAKMNALLEPSVIAELYEASQAGV KVDLIVRGVCALQPGVPGLSENITVRSVIGRFLEHHRIFYFHASGAERVYLSSADWMDRNLFRRVEVAFPIHDRKLKRRV IAEGLSVFLGDNQSAWLMQSDGHYKRRRAGKTPRSAQLGLLEKFGG
Specific function: Catalyzes the reversible transfer of the terminal phosphate of ATP to form a long-chain polyphosphate (polyP) [H]
COG id: COG0855
COG function: function code P; Polyphosphate kinase
Gene ontology:
Cell location: Membrane [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the polyphosphate kinase family [H]
Homologues:
Organism=Escherichia coli, GI1788847, Length=662, Percent_Identity=35.8006042296073, Blast_Score=376, Evalue=1e-105,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003414 [H]
Pfam domain/function: PF02503 PP_kinase [H]
EC number: =2.7.4.1 [H]
Molecular weight: Translated: 77467; Mature: 77335
Theoretical pI: Translated: 8.38; Mature: 8.38
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.9 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 3.3 %Cys+Met (Translated Protein) 0.9 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH MRDNPGALSPDGMSLQHVYDLVVERAQRLVHKQYTMLHETILPALETEGIYFHGTDTWSE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH AQLEWARNYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGRDAFGRQALLGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRLVRMPQALSGFRHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPAHIVRRLLDESSLNDKDCYRVHGAVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LMQLPDLVDLPELKFVPHTPSTPAAVANTTSMFTAIDRGDILLHHPYESFQPVLELLREA HHHCCCCCCCCCCEEECCCCCCCHHHHCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHH AKDPQVVAIKQTIYRTGNDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWASRLEA CCCCCEEEEEHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRREKRGGKTVLRRYTHLGTGNYHPRTARLYTDFGLMTA HHHHHHHHHHCCHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC DQKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPLLIDGIRNEVANARAGKRARIVAK CHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEECHHHHHHHHHHHHHCCCCCHHHHHHH MNALLEPSVIAELYEASQAGVKVDLIVRGVCALQPGVPGLSENITVRSVIGRFLEHHRIF HHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEE YFHASGAERVYLSSADWMDRNLFRRVEVAFPIHDRKLKRRVIAEGLSVFLGDNQSAWLMQ EEECCCCCEEEECCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCHHEEECCCCCEEEEE SDGHYKRRRAGKTPRSAQLGLLEKFGG CCCCHHHHHCCCCCCCHHHHHHHHCCC >Mature Secondary Structure STRYPLLNRELGILGFNERVLAQAADPHVPLLERLRFICITSSNLDEFFEVRMAGLQEQ CCCCCCCCCCCCEEECCHHHHHHCCCCCCCHHHCCEEEEEECCCHHHHHHHHHHHHHHH MRDNPGALSPDGMSLQHVYDLVVERAQRLVHKQYTMLHETILPALETEGIYFHGTDTWSE HCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCHH AQLEWARNYFLDELLPVLTPIGLDPAHPFPRVLNKSLNFVVELEGRDAFGRQALLGIVQA HHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHC PRALPRLVRMPQALSGFRHGFVLLSSLMQRFVGELFPKLVVKSCNQFRITRNSELFVDED HHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCEEEECC EITNLRVALQGELPARHLGNAVRLEVSADTPAHIVRRLLDESSLNDKDCYRVHGAVNLVR CCCEEEEEEECCCCHHHCCCEEEEEECCCCHHHHHHHHHHHCCCCCCHHHHHHHHHHHHH LMQLPDLVDLPELKFVPHTPSTPAAVANTTSMFTAIDRGDILLHHPYESFQPVLELLREA HHHCCCCCCCCCCEEECCCCCCCHHHHCHHHHHEEECCCCEEEECCHHHHHHHHHHHHHH AKDPQVVAIKQTIYRTGNDSPLMDALMEAARNGKEVTVVVELLARFDEETNINWASRLEA CCCCCEEEEEHHHHHCCCCCHHHHHHHHHHCCCCEEHHHHHHHHHCCCCCCCCHHHHHHH VGAHVVYGVVGHKCHAKMMLIVRREKRGGKTVLRRYTHLGTGNYHPRTARLYTDFGLMTA HHHHHHHHHHCCHHHHHHEEEEEECCCCCHHHHHHHHHCCCCCCCCCEEEEEECCCCCCC DQKICEDVHHVFQQLTGIGGELKLHELWQSPFTLHPLLIDGIRNEVANARAGKRARIVAK CHHHHHHHHHHHHHHHCCCCCEEHHHHHCCCCEECHHHHHHHHHHHHHCCCCCHHHHHHH MNALLEPSVIAELYEASQAGVKVDLIVRGVCALQPGVPGLSENITVRSVIGRFLEHHRIF HHHHCCHHHHHHHHHHHHCCCEEEHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHCEEE YFHASGAERVYLSSADWMDRNLFRRVEVAFPIHDRKLKRRVIAEGLSVFLGDNQSAWLMQ EEECCCCCEEEECCCCHHHHHHHHHHHEECCCHHHHHHHHHHHHCHHEEECCCCCEEEEE SDGHYKRRRAGKTPRSAQLGLLEKFGG CCCCHHHHHCCCCCCCHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: NA