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The map label for this gene is yafS [H]

Identifier: 238026773

GI number: 238026773

Start: 1239396

End: 1240208

Strand: Reverse

Name: yafS [H]

Synonym: bglu_1g11310

Alternate gene names: 238026773

Gene position: 1240208-1239396 (Counterclockwise)

Preceding gene: 238026782

Following gene: 238026772

Centisome position: 31.75

GC content: 69.86

Gene sequence:

>813_bases
ATGTCAGACCGTCCGATTATAGACTGGCCCGCCTGGAGCGCCTCGCCGCCCGGCCGTTACGTGCTCGAGTGGGAACAGGC
CCAGCTCGACCACGTCGTGTCCGACGTGTTCGGCTTTCACGCCCTGCAGCTCGGCCTGCCCCAGCTCGATTCGCTGCGCG
AAAACCGCATGCCGGGCCGCGGCCTCGTGCTCGATCCCGCCAGCGGTGCGAGCGAGCCGTTCCGCTACCCGTGGCCGGGC
GATCCGCCCGGCCCGCACCATGCCCCGGCCGGGCGCAGCACCGTCTGGTGCGACCTGCTCGACCTGCCGTTCGAATCGCA
AAGCGTGGACCTGATCGTGATGCCGCACACGCTCGAGTTCACCGCCGATCCGCACCGCCTGCTGCGCGAGGCCGAACGCG
TGCTGATGCCGGAAGGCCGGCTCGTCATCACCGGCTTCAACTCGTTGAGCCTGTGGGGCGCGCGCCAGTCGGTCGGGCGC
ATAGCGAACCGGCCGTTCGTGCCGGCCGCGCGCGACCCGATCGCGTTCATCCGGCTCAAGGACTGGATGAAGCTGCTCGG
CTTCGACATCGAGCGCGGCCGCTTCGGCTGCTATCGGCCGCCGCTCGCCAGCGACAAGTGGATGGCGCGCTACGCCTTCA
TGGAGGCGGCCGGCGACCGCTGGTGGCCGATCTTCGGCGCGGTCTACATGGTGACCGCCGTCAAGCGCGTGCGCGAGATG
CGGCTCGTCGGCCCGATCCGGGTCAGGAAACCCGTTCGCGCACCGGGCCTCGCGCCCGCCGCGACCCCTACCACTCATCA
AGAACACTCATGA

Upstream 100 bases:

>100_bases
CGACCGCGTCGCTGCCATCCGACACGAGCCAGATATAGTTGTCCTCAAACGCCGGCACCGGCACGTATTCCAGCTCGTTC
ATGGGCGCGCACTCATCGAT

Downstream 100 bases:

>100_bases
CGTTGCAACTGATCGACATCTACACCGACGGCGCCTGCAAGGGCAATCCCGGCCCCGGCGGCTGGGGCGCGCTGCTGCGC
TTCGGCGACCAGGAAAAGGA

Product: SAM-dependent methyltransferase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 270; Mature: 269

Protein sequence:

>270_residues
MSDRPIIDWPAWSASPPGRYVLEWEQAQLDHVVSDVFGFHALQLGLPQLDSLRENRMPGRGLVLDPASGASEPFRYPWPG
DPPGPHHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTADPHRLLREAERVLMPEGRLVITGFNSLSLWGARQSVGR
IANRPFVPAARDPIAFIRLKDWMKLLGFDIERGRFGCYRPPLASDKWMARYAFMEAAGDRWWPIFGAVYMVTAVKRVREM
RLVGPIRVRKPVRAPGLAPAATPTTHQEHS

Sequences:

>Translated_270_residues
MSDRPIIDWPAWSASPPGRYVLEWEQAQLDHVVSDVFGFHALQLGLPQLDSLRENRMPGRGLVLDPASGASEPFRYPWPG
DPPGPHHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTADPHRLLREAERVLMPEGRLVITGFNSLSLWGARQSVGR
IANRPFVPAARDPIAFIRLKDWMKLLGFDIERGRFGCYRPPLASDKWMARYAFMEAAGDRWWPIFGAVYMVTAVKRVREM
RLVGPIRVRKPVRAPGLAPAATPTTHQEHS
>Mature_269_residues
SDRPIIDWPAWSASPPGRYVLEWEQAQLDHVVSDVFGFHALQLGLPQLDSLRENRMPGRGLVLDPASGASEPFRYPWPGD
PPGPHHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEFTADPHRLLREAERVLMPEGRLVITGFNSLSLWGARQSVGRI
ANRPFVPAARDPIAFIRLKDWMKLLGFDIERGRFGCYRPPLASDKWMARYAFMEAAGDRWWPIFGAVYMVTAVKRVREMR
LVGPIRVRKPVRAPGLAPAATPTTHQEHS

Specific function: Unknown

COG id: COG0500

COG function: function code QR; SAM-dependent methyltransferases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

Organism=Escherichia coli, GI87081700, Length=180, Percent_Identity=32.2222222222222, Blast_Score=82, Evalue=4e-17,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013216 [H]

Pfam domain/function: PF08241 Methyltransf_11 [H]

EC number: NA

Molecular weight: Translated: 30441; Mature: 30310

Theoretical pI: Translated: 9.14; Mature: 9.14

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
3.3 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
3.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDRPIIDWPAWSASPPGRYVLEWEQAQLDHVVSDVFGFHALQLGLPQLDSLRENRMPGR
CCCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
GLVLDPASGASEPFRYPWPGDPPGPHHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEE
TADPHRLLREAERVLMPEGRLVITGFNSLSLWGARQSVGRIANRPFVPAARDPIAFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWMKLLGFDIERGRFGCYRPPLASDKWMARYAFMEAAGDRWWPIFGAVYMVTAVKRVREM
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RLVGPIRVRKPVRAPGLAPAATPTTHQEHS
HHCCCHHHCCCCCCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SDRPIIDWPAWSASPPGRYVLEWEQAQLDHVVSDVFGFHALQLGLPQLDSLRENRMPGR
CCCCEEECCCCCCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCCCCC
GLVLDPASGASEPFRYPWPGDPPGPHHAPAGRSTVWCDLLDLPFESQSVDLIVMPHTLEF
CEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEEEECCCCCCCCEEEEEECCEEEE
TADPHRLLREAERVLMPEGRLVITGFNSLSLWGARQSVGRIANRPFVPAARDPIAFIRLK
CCCHHHHHHHHHHHCCCCCCEEEEECCCEEEHHHHHHHHHHHCCCCCCCCCCCEEEEHHH
DWMKLLGFDIERGRFGCYRPPLASDKWMARYAFMEAAGDRWWPIFGAVYMVTAVKRVREM
HHHHHHCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHH
RLVGPIRVRKPVRAPGLAPAATPTTHQEHS
HHCCCHHHCCCCCCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]