| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026634
Identifier: 238026634
GI number: 238026634
Start: 1059186
End: 1060058
Strand: Reverse
Name: 238026634
Synonym: bglu_1g09860
Alternate gene names: NA
Gene position: 1060058-1059186 (Counterclockwise)
Preceding gene: 238026635
Following gene: 238026631
Centisome position: 27.14
GC content: 71.36
Gene sequence:
>873_bases ATGAGCCCGCTCGCCTGGCTCGATCCCTGGGAGCCGTCGCCGACGGTGGTGGTCGCGATCCTCGGCGCGGCCGTGCTGTT CGCGCGCGGCGCCCGCAAGGCGCGCGTCACGCCGCTGCGGCAGCTGTCGTTCTGGTTCGGCCTGGGCGCGCTCTACGTGG CGCTGCACACGCGGCTCGATTATTTCTTCGAGCACGAGTTCTTCATGCATCGCGCGCAGCACCTGGTATTGCATCATCTC GGGCCGTTCTTCATCGCGCTGTCCTACCCCGGCGCCGCGATCCGCGCCGGCCTTCCGTTCGCGTGGCGGCAGCGCGTGGT GAAGCCCGCGCTCGCCGCCAGGCCGCTGCGCGTCGCGCTCGACGTGCTGTTCCATCCGGCCGTCGCGGTGCTGCTGTTCG TCGGGCTGATCTATTTCTGGCTGCTCGCGCCGATCCACTTCGTCGCCATGCTCGACTGGCGGCTCTATCGCGTGATGAAC TGGAGCATGGTGATCGACGGGCTGCTGTTCTGGTGGCTCGTCGTCGATCCGCGCCCCGCGCCGCCGGCCCGCCTTGCGCC GGGGCGCCGCATCCTGATCGCGATCGCCGCGATTCCGCCGCAGATCCTGCTCGGCGCGCTGATCTTCTTCACGCCGCGCG AACTCTACCCGATCTATTCGATCTGCGGCCGCGCGTTCACGTGGCTGAGCCCGCTGCGCGACCAGCAGATCGGCGGCCTG CTGCTGTGGATTCCCGGCTCGATGATGAGCGTGCTCGGCGCACTGGTCGCACTGCGGCACTGGATGCGCCTGTCCGCGCG GGGCCGGCTGCGCGAGCGGACCGGCGCGGCGCCGCGCCCGGCGGACCGCGGCCGCGCCGCCGCCCCGCGCTAG
Upstream 100 bases:
>100_bases CAGGATTCGCCGGAGGCGATCGCCGCCGACCTGCGCGGCCTCCTTGGCGCACCGGCCTCATGAAGCCGCGCCCCACCGTG CCTCGGCACCGGCTCGCGCG
Downstream 100 bases:
>100_bases GCGCGAGGCGCCCGGCGCGCGTCAGGCGCAACGCATCCAGACGTGCGGGATGCCGTCGTCGTCGTGGACCTCCGAGCTTG GCACGAAGCCGAACGCGCCG
Product: membrane protein
Products: NA
Alternate protein names: Cytochrome C Oxidase Caa3 Assembly Factor Family Protein
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMN WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR
Sequences:
>Translated_290_residues MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHL GPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMN WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR >Mature_289_residues SPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHLG PFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNW SMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGLL LWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR
Specific function: Unknown
COG id: COG3336
COG function: function code S; Predicted membrane protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32737; Mature: 32605
Theoretical pI: Translated: 12.07; Mature: 12.07
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 2.4 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLD CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVAL HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHH DVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC >Mature Secondary Structure SPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLD CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVAL HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHH DVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC PPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA