Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is 238026634

Identifier: 238026634

GI number: 238026634

Start: 1059186

End: 1060058

Strand: Reverse

Name: 238026634

Synonym: bglu_1g09860

Alternate gene names: NA

Gene position: 1060058-1059186 (Counterclockwise)

Preceding gene: 238026635

Following gene: 238026631

Centisome position: 27.14

GC content: 71.36

Gene sequence:

>873_bases
ATGAGCCCGCTCGCCTGGCTCGATCCCTGGGAGCCGTCGCCGACGGTGGTGGTCGCGATCCTCGGCGCGGCCGTGCTGTT
CGCGCGCGGCGCCCGCAAGGCGCGCGTCACGCCGCTGCGGCAGCTGTCGTTCTGGTTCGGCCTGGGCGCGCTCTACGTGG
CGCTGCACACGCGGCTCGATTATTTCTTCGAGCACGAGTTCTTCATGCATCGCGCGCAGCACCTGGTATTGCATCATCTC
GGGCCGTTCTTCATCGCGCTGTCCTACCCCGGCGCCGCGATCCGCGCCGGCCTTCCGTTCGCGTGGCGGCAGCGCGTGGT
GAAGCCCGCGCTCGCCGCCAGGCCGCTGCGCGTCGCGCTCGACGTGCTGTTCCATCCGGCCGTCGCGGTGCTGCTGTTCG
TCGGGCTGATCTATTTCTGGCTGCTCGCGCCGATCCACTTCGTCGCCATGCTCGACTGGCGGCTCTATCGCGTGATGAAC
TGGAGCATGGTGATCGACGGGCTGCTGTTCTGGTGGCTCGTCGTCGATCCGCGCCCCGCGCCGCCGGCCCGCCTTGCGCC
GGGGCGCCGCATCCTGATCGCGATCGCCGCGATTCCGCCGCAGATCCTGCTCGGCGCGCTGATCTTCTTCACGCCGCGCG
AACTCTACCCGATCTATTCGATCTGCGGCCGCGCGTTCACGTGGCTGAGCCCGCTGCGCGACCAGCAGATCGGCGGCCTG
CTGCTGTGGATTCCCGGCTCGATGATGAGCGTGCTCGGCGCACTGGTCGCACTGCGGCACTGGATGCGCCTGTCCGCGCG
GGGCCGGCTGCGCGAGCGGACCGGCGCGGCGCCGCGCCCGGCGGACCGCGGCCGCGCCGCCGCCCCGCGCTAG

Upstream 100 bases:

>100_bases
CAGGATTCGCCGGAGGCGATCGCCGCCGACCTGCGCGGCCTCCTTGGCGCACCGGCCTCATGAAGCCGCGCCCCACCGTG
CCTCGGCACCGGCTCGCGCG

Downstream 100 bases:

>100_bases
GCGCGAGGCGCCCGGCGCGCGTCAGGCGCAACGCATCCAGACGTGCGGGATGCCGTCGTCGTCGTGGACCTCCGAGCTTG
GCACGAAGCCGAACGCGCCG

Product: membrane protein

Products: NA

Alternate protein names: Cytochrome C Oxidase Caa3 Assembly Factor Family Protein

Number of amino acids: Translated: 290; Mature: 289

Protein sequence:

>290_residues
MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHL
GPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMN
WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL
LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR

Sequences:

>Translated_290_residues
MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHL
GPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMN
WSMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL
LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR
>Mature_289_residues
SPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLDYFFEHEFFMHRAQHLVLHHLG
PFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVALDVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNW
SMVIDGLLFWWLVVDPRPAPPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGLL
LWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR

Specific function: Unknown

COG id: COG3336

COG function: function code S; Predicted membrane protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 32737; Mature: 32605

Theoretical pI: Translated: 12.07; Mature: 12.07

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.8 %Met     (Translated Protein)
3.1 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.4 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLD
CCCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVAL
HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHH
DVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR
EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC
>Mature Secondary Structure 
SPLAWLDPWEPSPTVVVAILGAAVLFARGARKARVTPLRQLSFWFGLGALYVALHTRLD
CCCCCCCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHH
YFFEHEFFMHRAQHLVLHHLGPFFIALSYPGAAIRAGLPFAWRQRVVKPALAARPLRVAL
HHHHHHHHHHHHHHHHHHHCCHHEEEECCCCHHHHCCCCHHHHHHHHHHHHHHCHHHHHH
DVLFHPAVAVLLFVGLIYFWLLAPIHFVAMLDWRLYRVMNWSMVIDGLLFWWLVVDPRPA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCC
PPARLAPGRRILIAIAAIPPQILLGALIFFTPRELYPIYSICGRAFTWLSPLRDQQIGGL
CCCCCCCCCEEEEEEECCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHCCE
LLWIPGSMMSVLGALVALRHWMRLSARGRLRERTGAAPRPADRGRAAAPR
EEECCHHHHHHHHHHHHHHHHHHHHHCCHHHHHCCCCCCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA