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The map label for this gene is 238026635

Identifier: 238026635

GI number: 238026635

Start: 1060096

End: 1060815

Strand: Reverse

Name: 238026635

Synonym: bglu_1g09870

Alternate gene names: NA

Gene position: 1060815-1060096 (Counterclockwise)

Preceding gene: 238026638

Following gene: 238026634

Centisome position: 27.16

GC content: 74.31

Gene sequence:

>720_bases
CTGCCCTGCCCCGGTTCCCACTCTCCGCCGATGAGCCGATCGATGCCTCTCCTGCCCGGCACCACCCGACGCCAGCCCCC
GCGCGGCTCACACCGTGCGCGCCCCGCGATGGCACGCGCGGGATCGGCGGCGGGCGCGGCGCTGGTGCTGGCGGCGGCCT
GCGCGCTGGGCGCCTGCTCGCCGCGCGGCACCAGCACCGCCACGCTGACCGACGTCTCGGGCCACCTGCCCGACCTCGCG
TTCTCGCTGACCGGCGAGGACGGCAGGCCGATCGACGCGGCGGCGTTTCGCGGCCGCGTCGCGCTCGTCTATTTCGGCTA
CACGCACTGCCCCGACGTCTGCCCGACGACGATGGCGCGGCTCATGCAGGTGCTGGCCCGGCTCGGCCCCGACGCGGACC
GGGTGCGCATCCTGTTCGTGTCGGTCGATCCGGCCCGCGACACGCCGGCACTGCTGCGCGCCTACGTCGGCGCGTTCGAC
GCCAAGCACGCGGTCGGGCTGACCGGCAGCGCGCGCGAGATCGAGACGCTGGCGAAACGCTACCGCATCGCCTATCAAAT
GGACGCACCCGATGCCTCGGGCGACTATGCGGTCACGCACAGCTCGGCCGTCTATGTGTTCGATGCGCGCGGCCGGGCGC
GGCGGCTCGCCACCGACCAGGATTCGCCGGAGGCGATCGCCGCCGACCTGCGCGGCCTCCTTGGCGCACCGGCCTCATGA

Upstream 100 bases:

>100_bases
ATCGCCGGCATCGCTCGCAGCCGCCCCCGCCCCGACGAATTGCGCTACAGTCGGACGATTCGAAGACGGGCTGCAGCGCG
CGTATCGGCCCCGATTCGGA

Downstream 100 bases:

>100_bases
AGCCGCGCCCCACCGTGCCTCGGCACCGGCTCGCGCGATGAGCCCGCTCGCCTGGCTCGATCCCTGGGAGCCGTCGCCGA
CGGTGGTGGTCGCGATCCTC

Product: SCO1/SenC family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 239; Mature: 238

Protein sequence:

>239_residues
MPCPGSHSPPMSRSMPLLPGTTRRQPPRGSHRARPAMARAGSAAGAALVLAAACALGACSPRGTSTATLTDVSGHLPDLA
FSLTGEDGRPIDAAAFRGRVALVYFGYTHCPDVCPTTMARLMQVLARLGPDADRVRILFVSVDPARDTPALLRAYVGAFD
AKHAVGLTGSAREIETLAKRYRIAYQMDAPDASGDYAVTHSSAVYVFDARGRARRLATDQDSPEAIAADLRGLLGAPAS

Sequences:

>Translated_239_residues
MPCPGSHSPPMSRSMPLLPGTTRRQPPRGSHRARPAMARAGSAAGAALVLAAACALGACSPRGTSTATLTDVSGHLPDLA
FSLTGEDGRPIDAAAFRGRVALVYFGYTHCPDVCPTTMARLMQVLARLGPDADRVRILFVSVDPARDTPALLRAYVGAFD
AKHAVGLTGSAREIETLAKRYRIAYQMDAPDASGDYAVTHSSAVYVFDARGRARRLATDQDSPEAIAADLRGLLGAPAS
>Mature_238_residues
PCPGSHSPPMSRSMPLLPGTTRRQPPRGSHRARPAMARAGSAAGAALVLAAACALGACSPRGTSTATLTDVSGHLPDLAF
SLTGEDGRPIDAAAFRGRVALVYFGYTHCPDVCPTTMARLMQVLARLGPDADRVRILFVSVDPARDTPALLRAYVGAFDA
KHAVGLTGSAREIETLAKRYRIAYQMDAPDASGDYAVTHSSAVYVFDARGRARRLATDQDSPEAIAADLRGLLGAPAS

Specific function: Unknown

COG id: COG1999

COG function: function code R; Uncharacterized protein SCO1/SenC/PrrC, involved in biogenesis of respiratory and photosynthetic systems

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the SCO1/2 family [H]

Homologues:

Organism=Homo sapiens, GI281182727, Length=163, Percent_Identity=36.1963190184049, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI281182722, Length=163, Percent_Identity=36.1963190184049, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI281182716, Length=163, Percent_Identity=36.1963190184049, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI153791313, Length=163, Percent_Identity=36.1963190184049, Blast_Score=100, Evalue=2e-21,
Organism=Homo sapiens, GI4759068, Length=137, Percent_Identity=37.2262773722628, Blast_Score=98, Evalue=7e-21,
Organism=Caenorhabditis elegans, GI17531419, Length=152, Percent_Identity=30.9210526315789, Blast_Score=90, Evalue=1e-18,
Organism=Saccharomyces cerevisiae, GI6319498, Length=135, Percent_Identity=35.5555555555556, Blast_Score=105, Evalue=6e-24,
Organism=Saccharomyces cerevisiae, GI6319511, Length=134, Percent_Identity=32.8358208955224, Blast_Score=85, Evalue=8e-18,
Organism=Drosophila melanogaster, GI19920710, Length=239, Percent_Identity=28.8702928870293, Blast_Score=99, Evalue=2e-21,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003782
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF02630 SCO1-SenC [H]

EC number: NA

Molecular weight: Translated: 25027; Mature: 24896

Theoretical pI: Translated: 9.25; Mature: 9.25

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.1 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
5.0 %Cys+Met (Translated Protein)
2.1 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MPCPGSHSPPMSRSMPLLPGTTRRQPPRGSHRARPAMARAGSAAGAALVLAAACALGACS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC
PRGTSTATLTDVSGHLPDLAFSLTGEDGRPIDAAAFRGRVALVYFGYTHCPDVCPTTMAR
CCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHH
LMQVLARLGPDADRVRILFVSVDPARDTPALLRAYVGAFDAKHAVGLTGSAREIETLAKR
HHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH
YRIAYQMDAPDASGDYAVTHSSAVYVFDARGRARRLATDQDSPEAIAADLRGLLGAPAS
HHEEEEECCCCCCCCEEEEECCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
PCPGSHSPPMSRSMPLLPGTTRRQPPRGSHRARPAMARAGSAAGAALVLAAACALGACS
CCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCHHHHHHHHHHHHCCCC
PRGTSTATLTDVSGHLPDLAFSLTGEDGRPIDAAAFRGRVALVYFGYTHCPDVCPTTMAR
CCCCCEEEEECCCCCCCCEEEEEECCCCCCCCHHHHCCCEEEEEECCCCCCCCCHHHHHH
LMQVLARLGPDADRVRILFVSVDPARDTPALLRAYVGAFDAKHAVGLTGSAREIETLAKR
HHHHHHHHCCCCCCEEEEEEEECCCCCCHHHHHHHHHHHCCCHHCCCCCCHHHHHHHHHH
YRIAYQMDAPDASGDYAVTHSSAVYVFDARGRARRLATDQDSPEAIAADLRGLLGAPAS
HHEEEEECCCCCCCCEEEEECCEEEEEECCCCHHHCCCCCCCHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA