| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is aroA [H]
Identifier: 238026534
GI number: 238026534
Start: 955782
End: 957080
Strand: Direct
Name: aroA [H]
Synonym: bglu_1g08780
Alternate gene names: 238026534
Gene position: 955782-957080 (Clockwise)
Preceding gene: 238026533
Following gene: 238026535
Centisome position: 24.47
GC content: 68.51
Gene sequence:
>1299_bases ATGGAATTCCTCGATATCGGCCCCTACTCCCGTGTGTCGGGCACGGTGCGTCTGCCCGGCTCCAAGAGCATCTCGAACCG CGTGCTGCTGCTCGCCGCGCTGTCCGAGGGCGTGACGACGATCACCAACCTGCTCGACTCCGACGACACGCGCGTGATGC TGGCCGCGCTCGAAGCGCTCGGCGTGCGGCTCGAACGCCATGCCGATACCTGTGTCGTGAACGGCACGCGCGGCGCGTTT CCGGCGAAGACGGCCGATCTGTTTCTCGGCAACGCCGGCACCGCAGTGCGTCCGCTCACGGCTGCGCTGGCCGTCAACGG CGGCGACTACCGCGTCCACGGCGTGCCGCGCATGCACGAGCGGCCGATCGGCGACCTCGTCGACGGCCTGCGCCAGATCG GCGCCGTGATCGACTACGAGCAGAACGAAGGGTATCCGCCGCTGCGGATCCAGGCCGGTACGATCGCCGTCGACGCACCG ATCCGCGTGCGCGGCGACGTGTCTAGCCAGTTCCTGACCGCGCTGCTGATGACGCTGCCGCTCGTCGGCAAGAAGGGGGG CGCGAGCGTCGTCGAGATCGACGGCGAGCTGATCTCGAAGCCCTACATCGAGATCACGATCAAGCTGATGGCGCGCTTCG GCGTGACGGTCGAGCGTGACGGCTGGCAGCGCTTCAGCGTGCCGGCGGCGCGCTACCAGTCGCCGGGCACGATCATGGTG GAGGGCGACGCGTCGTCCGCATCGTATTTCCTCGCGGCCGGCGCGCTCGGCGGCGGCCCGCTGCGCATCGAGGGCGTGGG CCGCGCCAGCATCCAGGGCGACGTTGGCTTTGCCACGGCGCTCATGCAGATGGGCGCGAACGTCTCGATGGGCGACGACT GGATCGAGGTGCGCGGCATCGGCCACGACCACGGCAAGCTCGAGCCGATCGACATGGACTTCAACCTGATCCCCGACGCG GCGATGACGATCGCGGTGGCCGCGCTGTTCGCCGAGGGCACCAGCACGCTGCGCAACATCGCAAGCTGGCGCGTCAAGGA GACCGACCGGATCGCGGCGATGGCCGCCGAGTTGCGCAAGCTGGGCGCGACCGTGGAGGAGGGCGCCGACTACCTCGTCG TCACGCCGCCCGCGAAGCTCGTGCCGAATGCCGCGATCGACACCTATGACGATCACCGCATGGCGATGTGTTTCTCGCTC GTGAGCCTCGGCGGCGTGCCGGTGCGGATCAACGATCCGAAGTGCGTCGCCAAGACTTTCCCCGATTATTTCGACCGCTT TACCGCGCTCGCGCGCTGA
Upstream 100 bases:
>100_bases CTCGAGGCAGTCTTCACCCGTTCGCGCGCCGCGCGCACGGCCTGGCAGGAGCGCGGCGGCAAAGCCGCCCCCGGTTCCGT TCAGTCATAACAGGATCTTT
Downstream 100 bases:
>100_bases TCCGTTTGTTCCGATGAAATCGACTCGACCATTCCACCCGACCCCCGTCATCACGATCGACGGCCCGACCGCGTCCGGCA AGGGCACGGTTGCCGCGCTC
Product: 3-phosphoshikimate 1-carboxyvinyltransferase
Products: NA
Alternate protein names: 5-enolpyruvylshikimate-3-phosphate synthase; EPSP synthase; EPSPS [H]
Number of amino acids: Translated: 432; Mature: 432
Protein sequence:
>432_residues MEFLDIGPYSRVSGTVRLPGSKSISNRVLLLAALSEGVTTITNLLDSDDTRVMLAALEALGVRLERHADTCVVNGTRGAF PAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAVIDYEQNEGYPPLRIQAGTIAVDAP IRVRGDVSSQFLTALLMTLPLVGKKGGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFSVPAARYQSPGTIMV EGDASSASYFLAAGALGGGPLRIEGVGRASIQGDVGFATALMQMGANVSMGDDWIEVRGIGHDHGKLEPIDMDFNLIPDA AMTIAVAALFAEGTSTLRNIASWRVKETDRIAAMAAELRKLGATVEEGADYLVVTPPAKLVPNAAIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVAKTFPDYFDRFTALAR
Sequences:
>Translated_432_residues MEFLDIGPYSRVSGTVRLPGSKSISNRVLLLAALSEGVTTITNLLDSDDTRVMLAALEALGVRLERHADTCVVNGTRGAF PAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAVIDYEQNEGYPPLRIQAGTIAVDAP IRVRGDVSSQFLTALLMTLPLVGKKGGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFSVPAARYQSPGTIMV EGDASSASYFLAAGALGGGPLRIEGVGRASIQGDVGFATALMQMGANVSMGDDWIEVRGIGHDHGKLEPIDMDFNLIPDA AMTIAVAALFAEGTSTLRNIASWRVKETDRIAAMAAELRKLGATVEEGADYLVVTPPAKLVPNAAIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVAKTFPDYFDRFTALAR >Mature_432_residues MEFLDIGPYSRVSGTVRLPGSKSISNRVLLLAALSEGVTTITNLLDSDDTRVMLAALEALGVRLERHADTCVVNGTRGAF PAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHERPIGDLVDGLRQIGAVIDYEQNEGYPPLRIQAGTIAVDAP IRVRGDVSSQFLTALLMTLPLVGKKGGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFSVPAARYQSPGTIMV EGDASSASYFLAAGALGGGPLRIEGVGRASIQGDVGFATALMQMGANVSMGDDWIEVRGIGHDHGKLEPIDMDFNLIPDA AMTIAVAALFAEGTSTLRNIASWRVKETDRIAAMAAELRKLGATVEEGADYLVVTPPAKLVPNAAIDTYDDHRMAMCFSL VSLGGVPVRINDPKCVAKTFPDYFDRFTALAR
Specific function: Aromatic amino acids biosynthesis; shikimate pathway; sixth step. [C]
COG id: COG0128
COG function: function code E; 5-enolpyruvylshikimate-3-phosphate synthase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the EPSP synthase family [H]
Homologues:
Organism=Escherichia coli, GI1787137, Length=436, Percent_Identity=58.2568807339449, Blast_Score=461, Evalue=1e-131, Organism=Saccharomyces cerevisiae, GI6320332, Length=448, Percent_Identity=37.0535714285714, Blast_Score=235, Evalue=1e-62,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001986 - InterPro: IPR006264 - InterPro: IPR023193 - InterPro: IPR013792 [H]
Pfam domain/function: PF00275 EPSP_synthase [H]
EC number: =2.5.1.19 [H]
Molecular weight: Translated: 46013; Mature: 46013
Theoretical pI: Translated: 5.30; Mature: 5.30
Prosite motif: PS00104 EPSP_SYNTHASE_1 ; PS00885 EPSP_SYNTHASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.7 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.9 %Cys+Met (Translated Protein) 0.7 %Cys (Mature Protein) 3.2 %Met (Mature Protein) 3.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MEFLDIGPYSRVSGTVRLPGSKSISNRVLLLAALSEGVTTITNLLDSDDTRVMLAALEAL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCHHHHHHHHHH GVRLERHADTCVVNGTRGAFPAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHE HHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAVIDYEQNEGYPPLRIQAGTIAVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECEEEECCCEEEECCCHHHHHHHHHHHHC LVGKKGGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFSVPAARYQSPGTIMV CCCCCCCCEEEEECHHHHCCCHHEEHHEEHHHHCCEEECCCCEEECCCHHHCCCCCEEEE EGDASSASYFLAAGALGGGPLRIEGVGRASIQGDVGFATALMQMGANVSMGDDWIEVRGI ECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GHDHGKLEPIDMDFNLIPDAAMTIAVAALFAEGTSTLRNIASWRVKETDRIAAMAAELRK CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH LGATVEEGADYLVVTPPAKLVPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVAKTF HCCHHHCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHC PDYFDRFTALAR HHHHHHHHHHCC >Mature Secondary Structure MEFLDIGPYSRVSGTVRLPGSKSISNRVLLLAALSEGVTTITNLLDSDDTRVMLAALEAL CCCCCCCCCCCCCCEEECCCCCCCCCCEEEEEEHHCCHHHHHHHHCCCCCHHHHHHHHHH GVRLERHADTCVVNGTRGAFPAKTADLFLGNAGTAVRPLTAALAVNGGDYRVHGVPRMHE HHHHCCCCCEEEEECCCCCCCCCCCEEEECCCCCCHHHEEEEEEECCCCEEEECCCCHHC RPIGDLVDGLRQIGAVIDYEQNEGYPPLRIQAGTIAVDAPIRVRGDVSSQFLTALLMTLP CCHHHHHHHHHHHHHEEEECCCCCCCCEEEEECEEEECCCEEEECCCHHHHHHHHHHHHC LVGKKGGASVVEIDGELISKPYIEITIKLMARFGVTVERDGWQRFSVPAARYQSPGTIMV CCCCCCCCEEEEECHHHHCCCHHEEHHEEHHHHCCEEECCCCEEECCCHHHCCCCCEEEE EGDASSASYFLAAGALGGGPLRIEGVGRASIQGDVGFATALMQMGANVSMGDDWIEVRGI ECCCCCCEEEEEECCCCCCCEEEEECCCCCCCCCHHHHHHHHHHCCCCCCCCCEEEEEEC GHDHGKLEPIDMDFNLIPDAAMTIAVAALFAEGTSTLRNIASWRVKETDRIAAMAAELRK CCCCCCCEEECCCCCCCCHHHHHHHHHHHHHCCHHHHHHHHHCCCCCHHHHHHHHHHHHH LGATVEEGADYLVVTPPAKLVPNAAIDTYDDHRMAMCFSLVSLGGVPVRINDPKCVAKTF HCCHHHCCCCEEEECCCHHHCCCCCCCCCCCHHHHHHHHHHHHCCEEEEECCCHHHHHHC PDYFDRFTALAR HHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: NA