Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

Click here to switch to the map view.

The map label for this gene is tyrC [H]

Identifier: 238026533

GI number: 238026533

Start: 954845

End: 955771

Strand: Direct

Name: tyrC [H]

Synonym: bglu_1g08770

Alternate gene names: 238026533

Gene position: 954845-955771 (Clockwise)

Preceding gene: 238026532

Following gene: 238026534

Centisome position: 24.44

GC content: 73.46

Gene sequence:

>927_bases
GTGTCTGATTTCTCGTTCAACAAACTGGTGATTTTCGGCGTCGGCCTGATCGGCGGTTCGCTCGCGCGCGCGCTGCGCGA
GCGCGATGGCACGCGGGCCGGCCGCGTGATCGGCGTGGGGCGTTCGCCGGCCACGGTCGAGCGCGCGCGCGCGCTCGGCG
TGGTCGATGCGATCGCCGCGCTCGACGATGTCGTGCAACTGCGCGAGGCGCTGGCGGGGGCCGACCTGGTGCTGCTCGCG
GTGCCGGTCGCGCAGACCGGGCCGCTGCTCGAACGGATCGCGCCGCTGCTCGACGCGGCGACGGTCGTGACCGACGCGGG
CAGCACCAAGTCCGACGTGGTCGCGGCCGCGCGCGCGGCCCTCGGCGAGCGCATCGCGCAGTTCGTGCCGGCCCACCCGA
TCGCGGGCCGCGAGGCGAGCGGCGTCGAGGCCGCGCTGCCCGAGCTCTACGTCGGCCGCAACGTCGTGCTCTGCGCGCTG
CCCGAGAATCCCCCCGGGGCGGTTGAGCGCGTCGCCGCGATGTGGCGCGCCACGGGCGCGGTGGTGCGCGAGATGGAGCC
CGCGCAGCACGATCGCGTGTTTGCCGCGGTCAGCCATCTGCCGCATCTGCTGTCGTTCGCGCTCGTCGAGCAGATCCTCG
GCGAAGCCGACGCCGAGCTGAAGTTTTCGTTCGCGGCGGGCGGGTTCCGCGATTTCACGCGGATCGCCGCTTCGAGCCCG
GAGATGTGGCGCGACGTTTGCCTGGCGAACCGCGAGGCGCTGCTCGACGAGCTCGACGCCTACACCCGGGTGCTCGCGCG
CTTGCGCGCGGCAATCGAGGCGGGCGACGCCGCCGCGCTCGAGGCAGTCTTCACCCGTTCGCGCGCCGCGCGCACGGCCT
GGCAGGAGCGCGGCGGCAAAGCCGCCCCCGGTTCCGTTCAGTCATAA

Upstream 100 bases:

>100_bases
TTGGCGACGATCCGCCGGCGCGGGTGCCGGCGGCGAGTGGTTCCATCGTGTTGCGCGCGGGTCGTTGCCGCGCGCCTTAC
CCGGCTAACAGGCGGCTGCC

Downstream 100 bases:

>100_bases
CAGGATCTTTATGGAATTCCTCGATATCGGCCCCTACTCCCGTGTGTCGGGCACGGTGCGTCTGCCCGGCTCCAAGAGCA
TCTCGAACCGCGTGCTGCTG

Product: Prephenate dehydrogenase

Products: NA

Alternate protein names: Arogenate dehydrogenase; ADH; Cyclohexadienyl dehydrogenase; Prephenate dehydrogenase; PDH [H]

Number of amino acids: Translated: 308; Mature: 307

Protein sequence:

>308_residues
MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLA
VPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCAL
PENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP
EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS

Sequences:

>Translated_308_residues
MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLA
VPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCAL
PENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP
EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS
>Mature_307_residues
SDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAALDDVVQLREALAGADLVLLAV
PVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAALGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALP
ENPPGAVERVAAMWRATGAVVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSPE
MWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGKAAPGSVQS

Specific function: Is competent to function as either prephenate dehydrogenase or as arogenate dehydrogenase [H]

COG id: COG0287

COG function: function code E; Prephenate dehydrogenase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Contains 1 prephenate/arogenate dehydrogenase domain [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR008927
- InterPro:   IPR016040
- InterPro:   IPR003099 [H]

Pfam domain/function: PF02153 PDH [H]

EC number: =1.3.1.43; =1.3.1.12 [H]

Molecular weight: Translated: 32328; Mature: 32197

Theoretical pI: Translated: 5.78; Mature: 5.78

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
1.3 %Met     (Translated Protein)
1.9 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
1.0 %Met     (Mature Protein)
1.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAA
CCCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
LDDVVQLREALAGADLVLLAVPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAA
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALPENPPGAVERVAAMWRATGA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
VVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH
EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
AAPGSVQS
CCCCCCCC
>Mature Secondary Structure 
SDFSFNKLVIFGVGLIGGSLARALRERDGTRAGRVIGVGRSPATVERARALGVVDAIAA
CCCCCCEEHHHHHHHHHHHHHHHHHHCCCCCCCCEEECCCCCHHHHHHHHHHHHHHHHH
LDDVVQLREALAGADLVLLAVPVAQTGPLLERIAPLLDAATVVTDAGSTKSDVVAAARAA
HHHHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHH
LGERIAQFVPAHPIAGREASGVEAALPELYVGRNVVLCALPENPPGAVERVAAMWRATGA
HHHHHHHHCCCCCCCCCCCCCHHHHHHHHHCCCCEEEEECCCCCCHHHHHHHHHHHHHHH
VVREMEPAQHDRVFAAVSHLPHLLSFALVEQILGEADAELKFSFAAGGFRDFTRIAASSP
HHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCEEEEECCCCHHHHHHHHCCCH
EMWRDVCLANREALLDELDAYTRVLARLRAAIEAGDAAALEAVFTRSRAARTAWQERGGK
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHCCCC
AAPGSVQS
CCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 7916685 [H]