| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is cmk [H]
Identifier: 238026535
GI number: 238026535
Start: 957094
End: 957780
Strand: Direct
Name: cmk [H]
Synonym: bglu_1g08790
Alternate gene names: 238026535
Gene position: 957094-957780 (Clockwise)
Preceding gene: 238026534
Following gene: 238026536
Centisome position: 24.5
GC content: 69.0
Gene sequence:
>687_bases ATGAAATCGACTCGACCATTCCACCCGACCCCCGTCATCACGATCGACGGCCCGACCGCGTCCGGCAAGGGCACGGTTGC CGCGCTCGTGGCGGCGCATCTCGGCTTTCACCTGCTCGACAGCGGCGCGCTGTACCGGCTCGCCGCGCTCGCGAGCATGC GCTACGGGATCGAGCCCGACGACGAGGCGGGGCTGGCGAAACTGGTCGACGATCTGCACATCACGTTCCGAGAGGGCTGC GCACGGCTCGACGGCGTGGACGTCTCGGACCAGATCCGCGCCGAGGCGGTGGGCAACCGCGCCTCGGCGATCGCCGTCCA CGCCGGCGTGCGGGCCGCGCTGGTGGCGCGCCAGCGGGCCTTTCGCAAGACGCCTGGCCTGGTCGCGGACGGCCGCGACA TGGGCACCGTGATCTTTCCGGACGCGGGCCTGAAGGTGTTCCTGACCGCCAGCGTCGAGGCCCGCGCGGCCCGGCGGCAT AAGCAATTGATGCAAAAAGGTTTTTCTGCTAACATTGATGACTTGCTCCGGGATTTGCGTGAGCGGGACGCGCGGGACAG CAACCGTGCGGCCTCGCCGCTCAAGCCCGCGGCGGATGCGAAGCTTCTGGACACCTCGGGCCTGTCGATCGAGCAAGCGG TCGAACAGGTGCAGGCGTGGTACCGGGAAGTCGCGCGGTCCGCCTGA
Upstream 100 bases:
>100_bases GGCGTGCCGGTGCGGATCAACGATCCGAAGTGCGTCGCCAAGACTTTCCCCGATTATTTCGACCGCTTTACCGCGCTCGC GCGCTGATCCGTTTGTTCCG
Downstream 100 bases:
>100_bases CGGCACCCCGTCGCGGCCTCGAAGTGGCAGTTAAGCAACACTGGGCAGCTCCGGCAGTGACGTAGCAGATAGTAGCCAGC AGTCGCGGTAGGTGCTCCGG
Product: cytidylate kinase
Products: NA
Alternate protein names: CK; Cytidine monophosphate kinase; CMP kinase [H]
Number of amino acids: Translated: 228; Mature: 228
Protein sequence:
>228_residues MKSTRPFHPTPVITIDGPTASGKGTVAALVAAHLGFHLLDSGALYRLAALASMRYGIEPDDEAGLAKLVDDLHITFREGC ARLDGVDVSDQIRAEAVGNRASAIAVHAGVRAALVARQRAFRKTPGLVADGRDMGTVIFPDAGLKVFLTASVEARAARRH KQLMQKGFSANIDDLLRDLRERDARDSNRAASPLKPAADAKLLDTSGLSIEQAVEQVQAWYREVARSA
Sequences:
>Translated_228_residues MKSTRPFHPTPVITIDGPTASGKGTVAALVAAHLGFHLLDSGALYRLAALASMRYGIEPDDEAGLAKLVDDLHITFREGC ARLDGVDVSDQIRAEAVGNRASAIAVHAGVRAALVARQRAFRKTPGLVADGRDMGTVIFPDAGLKVFLTASVEARAARRH KQLMQKGFSANIDDLLRDLRERDARDSNRAASPLKPAADAKLLDTSGLSIEQAVEQVQAWYREVARSA >Mature_228_residues MKSTRPFHPTPVITIDGPTASGKGTVAALVAAHLGFHLLDSGALYRLAALASMRYGIEPDDEAGLAKLVDDLHITFREGC ARLDGVDVSDQIRAEAVGNRASAIAVHAGVRAALVARQRAFRKTPGLVADGRDMGTVIFPDAGLKVFLTASVEARAARRH KQLMQKGFSANIDDLLRDLRERDARDSNRAASPLKPAADAKLLDTSGLSIEQAVEQVQAWYREVARSA
Specific function: ATP, Datp, And GTP Are Equally Effective As Phosphate Donors. CMP And Dcmp Are The Best Phosphate Acceptors. [C]
COG id: COG0283
COG function: function code F; Cytidylate kinase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the cytidylate kinase family. Type 1 subfamily [H]
Homologues:
Organism=Escherichia coli, GI1787139, Length=217, Percent_Identity=51.6129032258064, Blast_Score=213, Evalue=9e-57,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003136 - InterPro: IPR011994 [H]
Pfam domain/function: PF02224 Cytidylate_kin [H]
EC number: =2.7.4.14 [H]
Molecular weight: Translated: 24418; Mature: 24418
Theoretical pI: Translated: 9.56; Mature: 9.56
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.4 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.4 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 2.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKSTRPFHPTPVITIDGPTASGKGTVAALVAAHLGFHLLDSGALYRLAALASMRYGIEPD CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC DEAGLAKLVDDLHITFREGCARLDGVDVSDQIRAEAVGNRASAIAVHAGVRAALVARQRA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHH FRKTPGLVADGRDMGTVIFPDAGLKVFLTASVEARAARRHKQLMQKGFSANIDDLLRDLR HHCCCCCEECCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ERDARDSNRAASPLKPAADAKLLDTSGLSIEQAVEQVQAWYREVARSA HHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC >Mature Secondary Structure MKSTRPFHPTPVITIDGPTASGKGTVAALVAAHLGFHLLDSGALYRLAALASMRYGIEPD CCCCCCCCCCCEEEECCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCCCCC DEAGLAKLVDDLHITFREGCARLDGVDVSDQIRAEAVGNRASAIAVHAGVRAALVARQRA CCHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHCCCHHEEEHHHHHHHHHHHHHHH FRKTPGLVADGRDMGTVIFPDAGLKVFLTASVEARAARRHKQLMQKGFSANIDDLLRDLR HHCCCCCEECCCCCCEEEECCCCEEEEEEECHHHHHHHHHHHHHHCCCCCCHHHHHHHHH ERDARDSNRAASPLKPAADAKLLDTSGLSIEQAVEQVQAWYREVARSA HHCCCCCCCCCCCCCCCCCCEEECCCCCCHHHHHHHHHHHHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA