| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026481
Identifier: 238026481
GI number: 238026481
Start: 890924
End: 891421
Strand: Reverse
Name: 238026481
Synonym: bglu_1g08250
Alternate gene names: NA
Gene position: 891421-890924 (Counterclockwise)
Preceding gene: 238026482
Following gene: 238026480
Centisome position: 22.82
GC content: 69.68
Gene sequence:
>498_bases ATGCCGCCGTCGCCTCGCCCCTGCTCTCCCAGTCGGTTCGCGTGCCTTGCCGCGATGCTGGCCGGCGTGCTCGTCGCGGC CGGCTGCACGATCACGCTGCCGAAGAGCGCGCTGGTACTCTCGCCTGCGCCGGCAACGAGCGACTCGACGCAGGCCCAGT ATCGCGACGCAGTGGCGCAGCGGATTCTCGACGCGAACCCCGCCAGCGTCCTGCACGGCACGCCGCAGGCAATGCTGCGC TCACTCGTGGTGGTGGCCTTCACCGTCGATCGCGACGGGCGCCTCGCGCGTTCGTCGGTCTATCGCAGCAATGGCGACGA CGGCGCCGAAGCGATCGCGCTGCAATCGCTGCGCCGCGCGGCGCCGCTGCCAAAGCCGCCGGCGGCCCTGCTCGACGGAC GCGGCCAGTTGGAGTTGATGGAAAGCTGGCTGTTCAACGACAACGGCCAGTTCCAGCTGCGCACGAAGGCGACGCAGCAG GCACAGACGATCGATTGA
Upstream 100 bases:
>100_bases TTTTCCAGTCGCGCCCCTCACGATCGTTTCTCCTGATGGTTTTCTCCGGCACGTCGGCTATGCTGACAGCGATCCGATCG CTCCCGGGATGCCTGCCGCC
Downstream 100 bases:
>100_bases GACGCGTGCCGCCTGCGCCGTTACCGAGAATCCCGGGCGCTGCCGGCTCGCCGTCGGGCGAAATCGATCACGCCTCACCG CATAAGGCGCGCCGCCACCC
Product: putative lipoprotein
Products: NA
Alternate protein names: NB Family Protein; NB-Like Protein; NB Domain-Containing Protein; Lipoprotein
Number of amino acids: Translated: 165; Mature: 164
Protein sequence:
>165_residues MPPSPRPCSPSRFACLAAMLAGVLVAAGCTITLPKSALVLSPAPATSDSTQAQYRDAVAQRILDANPASVLHGTPQAMLR SLVVVAFTVDRDGRLARSSVYRSNGDDGAEAIALQSLRRAAPLPKPPAALLDGRGQLELMESWLFNDNGQFQLRTKATQQ AQTID
Sequences:
>Translated_165_residues MPPSPRPCSPSRFACLAAMLAGVLVAAGCTITLPKSALVLSPAPATSDSTQAQYRDAVAQRILDANPASVLHGTPQAMLR SLVVVAFTVDRDGRLARSSVYRSNGDDGAEAIALQSLRRAAPLPKPPAALLDGRGQLELMESWLFNDNGQFQLRTKATQQ AQTID >Mature_164_residues PPSPRPCSPSRFACLAAMLAGVLVAAGCTITLPKSALVLSPAPATSDSTQAQYRDAVAQRILDANPASVLHGTPQAMLRS LVVVAFTVDRDGRLARSSVYRSNGDDGAEAIALQSLRRAAPLPKPPAALLDGRGQLELMESWLFNDNGQFQLRTKATQQA QTID
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17467; Mature: 17336
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: PS00013 PROKAR_LIPOPROTEIN
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.8 %Cys (Translated Protein) 2.4 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.8 %Cys (Mature Protein) 1.8 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPPSPRPCSPSRFACLAAMLAGVLVAAGCTITLPKSALVLSPAPATSDSTQAQYRDAVAQ CCCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHH RILDANPASVLHGTPQAMLRSLVVVAFTVDRDGRLARSSVYRSNGDDGAEAIALQSLRRA HHHCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH APLPKPPAALLDGRGQLELMESWLFNDNGQFQLRTKATQQAQTID CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCC >Mature Secondary Structure PPSPRPCSPSRFACLAAMLAGVLVAAGCTITLPKSALVLSPAPATSDSTQAQYRDAVAQ CCCCCCCCCHHHHHHHHHHHHHHHHCCCEEEECCCEEEECCCCCCCCCHHHHHHHHHHH RILDANPASVLHGTPQAMLRSLVVVAFTVDRDGRLARSSVYRSNGDDGAEAIALQSLRRA HHHCCCCHHHHCCCHHHHHHHHHHHHEEECCCCCHHHHHHHCCCCCCHHHHHHHHHHHHH APLPKPPAALLDGRGQLELMESWLFNDNGQFQLRTKATQQAQTID CCCCCCCHHHHCCCCHHHHHHHHHCCCCCCEEEEECHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA