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The map label for this gene is yggW [H]

Identifier: 238026482

GI number: 238026482

Start: 891861

End: 893081

Strand: Reverse

Name: yggW [H]

Synonym: bglu_1g08260

Alternate gene names: 238026482

Gene position: 893081-891861 (Counterclockwise)

Preceding gene: 238026483

Following gene: 238026481

Centisome position: 22.86

GC content: 68.88

Gene sequence:

>1221_bases
GTGAGCCGGGCCGCCGAGACCGGGCAACGGATCGTCGCGACGTTCGCGTCGCCGGGCAGGGTCCGCCTCAGCGCGCTGCC
GCCGCTCGCGCTCTACATCCACTTCCCGTGGTGCGTGCGCAAGTGCCCCTACTGCGATTTCAATTCGCATGAATGGAAGG
GCGAGCGGTTTCCCGAGCAGGAATACCTCGACGCGCTGCGCGCCGACCTCGAGCAGGCGCTGCCGTTCGTCTGGGGCCGC
CAGGTGCATACCGTCTTCATCGGCGGCGGCACGCCGAGCCTGCTGTCGGCGGGCGGGCTCGACCGGCTGCTGTCCGACGT
GCGCGCGCTGCTGCCGCTCGACGCCGATGCCGAGATCACGCTCGAGGCCAACCCCGGCACGTTCGAGGCGGCCAAGTTCG
CGCAGTTCCGCGCAAGCGGCGTGAACCGGCTGTCGATCGGCATCCAGAGCTTCAACGAGGCGCACCTCAAGGCGCTCGGC
CGCATCCACGACTCCGCGCAGGCGCGCGCGGCCGTCGAGATCGCCGCCAGCAGGTTCGACAACTTCAATCTCGACCTGAT
GTTCGCGCTGCCGAACCAGAGCCTGGACGAATGCCGGGCCGACATCGAAACGGCGCTCGCCTACGCGCCGCCGCATCTGT
CGCTCTATCACCTGACGCTCGAGCCGAACACGATGTTCGCGAAGTTCCCGCCGGCGGTGCCCGACGACGATGCATCGGCC
GACATGCAGGACTGGATTCACGAGCGCACGGCCGAGGCCGGCTACGGGCACTACGAGGTGTCGGCCTATGCGCAGCCGCA
CCGCCAATGCAGGCACAACCTCAATTACTGGCGCTTCGGCGACTATCTCGGCATCGGCGCGGGCGCGCACACGAAGCTGT
CGTTTCCGAACCGCATCCTGCGGCAGGCGCGCTACAAGCATCCGGCCACCTTCATCGAGCAGGCCATGGCCGGCACGCCG
GTGCAGGAGGAGCGCGAGGTCGGGCCGCGCGATCTGCCGTTCGAGTTCATGCTGAACACGCTGCGGCTGGTGGAAGGGTT
CCCGGTGGCGAGCTATGCCGAGCGCACCGGGCTGCCGTTCTCGACGATCGAGCCGGCGCTGGCGGAGGCGGAGCGGCGCG
GGCTGATCCAGCGCGACTTCGAACGGATCGCGCCGACGCCGCTCGGCCAGCGCTTCCTCAACGATCTCCAGGAGCTGTTC
CTGCGCGGCGACGAAGCGTGA

Upstream 100 bases:

>100_bases
TGGGCGCGACCGTCGCCGAACTCGATCCGGCCGCGAAGAACGGCATCAGCCATCGCGCGATCGCGCTGCGCGCGCTGCTC
GCGCGGCTCGGGGAAGAGGC

Downstream 100 bases:

>100_bases
GCTGAGCGCCAAAGGAGCGGACAGCGTCGGCATTTCGGTTACAATGCGCGGCTTGGAAGCGTGGCCGAGTGGTTTAAGGC
ACCGGTCTTGAAAACCGGCG

Product: coproporphyrinogen III oxidase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 406; Mature: 405

Protein sequence:

>406_residues
MSRAAETGQRIVATFASPGRVRLSALPPLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQEYLDALRADLEQALPFVWGR
QVHTVFIGGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALG
RIHDSAQARAAVEIAASRFDNFNLDLMFALPNQSLDECRADIETALAYAPPHLSLYHLTLEPNTMFAKFPPAVPDDDASA
DMQDWIHERTAEAGYGHYEVSAYAQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTP
VQEEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPFSTIEPALAEAERRGLIQRDFERIAPTPLGQRFLNDLQELF
LRGDEA

Sequences:

>Translated_406_residues
MSRAAETGQRIVATFASPGRVRLSALPPLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQEYLDALRADLEQALPFVWGR
QVHTVFIGGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALG
RIHDSAQARAAVEIAASRFDNFNLDLMFALPNQSLDECRADIETALAYAPPHLSLYHLTLEPNTMFAKFPPAVPDDDASA
DMQDWIHERTAEAGYGHYEVSAYAQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTP
VQEEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPFSTIEPALAEAERRGLIQRDFERIAPTPLGQRFLNDLQELF
LRGDEA
>Mature_405_residues
SRAAETGQRIVATFASPGRVRLSALPPLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQEYLDALRADLEQALPFVWGRQ
VHTVFIGGGTPSLLSAGGLDRLLSDVRALLPLDADAEITLEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGR
IHDSAQARAAVEIAASRFDNFNLDLMFALPNQSLDECRADIETALAYAPPHLSLYHLTLEPNTMFAKFPPAVPDDDASAD
MQDWIHERTAEAGYGHYEVSAYAQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRILRQARYKHPATFIEQAMAGTPV
QEEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPFSTIEPALAEAERRGLIQRDFERIAPTPLGQRFLNDLQELFL
RGDEA

Specific function: Unknown

COG id: COG0635

COG function: function code H; Coproporphyrinogen III oxidase and related Fe-S oxidoreductases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the anaerobic coproporphyrinogen-III oxidase family [H]

Homologues:

Organism=Homo sapiens, GI8922911, Length=269, Percent_Identity=37.546468401487, Blast_Score=171, Evalue=1e-42,
Organism=Escherichia coli, GI1789325, Length=381, Percent_Identity=51.7060367454068, Blast_Score=385, Evalue=1e-108,
Organism=Escherichia coli, GI87082341, Length=248, Percent_Identity=31.4516129032258, Blast_Score=114, Evalue=2e-26,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR006638
- InterPro:   IPR004559
- InterPro:   IPR010723
- InterPro:   IPR007197 [H]

Pfam domain/function: PF06969 HemN_C; PF04055 Radical_SAM [H]

EC number: NA

Molecular weight: Translated: 45453; Mature: 45322

Theoretical pI: Translated: 5.75; Mature: 5.75

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.2 %Cys     (Translated Protein)
1.5 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
1.2 %Cys     (Mature Protein)
1.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRAAETGQRIVATFASPGRVRLSALPPLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQ
CCCCHHHCCCEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCHH
EYLDALRADLEQALPFVWGRQVHTVFIGGGTPSLLSAGGLDRLLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDSAQARAAVEIAASRFD
EECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFNLDLMFALPNQSLDECRADIETALAYAPPHLSLYHLTLEPNTMFAKFPPAVPDDDASA
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCC
DMQDWIHERTAEAGYGHYEVSAYAQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHHHHCCCCEEEEEHHHCHHHHHHHCCCCEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAMAGTPVQEEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPF
HHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCH
STIEPALAEAERRGLIQRDFERIAPTPLGQRFLNDLQELFLRGDEA
HHCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC
>Mature Secondary Structure 
SRAAETGQRIVATFASPGRVRLSALPPLALYIHFPWCVRKCPYCDFNSHEWKGERFPEQ
CCCHHHCCCEEEEECCCCEEEEECCCCEEEEEECHHHHHCCCCCCCCCCCCCCCCCCHH
EYLDALRADLEQALPFVWGRQVHTVFIGGGTPSLLSAGGLDRLLSDVRALLPLDADAEIT
HHHHHHHHHHHHHHHHHCCCEEEEEEECCCCHHHHHCCCHHHHHHHHHHHCCCCCCCEEE
LEANPGTFEAAKFAQFRASGVNRLSIGIQSFNEAHLKALGRIHDSAQARAAVEIAASRFD
EECCCCCCHHHHHHHHHHCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
NFNLDLMFALPNQSLDECRADIETALAYAPPHLSLYHLTLEPNTMFAKFPPAVPDDDASA
CCCEEEEEECCCCCHHHHHHHHHHHHHCCCCCCEEEEEEECCCEEEEECCCCCCCCCCCC
DMQDWIHERTAEAGYGHYEVSAYAQPHRQCRHNLNYWRFGDYLGIGAGAHTKLSFPNRIL
HHHHHHHHHHHHCCCCEEEEEHHHCHHHHHHHCCCCEEECCEEECCCCCCCCCCCHHHHH
RQARYKHPATFIEQAMAGTPVQEEREVGPRDLPFEFMLNTLRLVEGFPVASYAERTGLPF
HHHHCCCHHHHHHHHHCCCCCHHHHCCCCCCCCHHHHHHHHHHHCCCCCHHHHHHCCCCH
STIEPALAEAERRGLIQRDFERIAPTPLGQRFLNDLQELFLRGDEA
HHCCHHHHHHHHCCHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9278503 [H]