| Definition | Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence. |
|---|---|
| Accession | NC_012724 |
| Length | 3,906,507 |
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The map label for this gene is 238026415
Identifier: 238026415
GI number: 238026415
Start: 814649
End: 815533
Strand: Direct
Name: 238026415
Synonym: bglu_1g07500
Alternate gene names: NA
Gene position: 814649-815533 (Clockwise)
Preceding gene: 238026414
Following gene: 238026416
Centisome position: 20.85
GC content: 69.38
Gene sequence:
>885_bases ATGAGCGAATCCCAGATCCTCGAAATCGCATCGGCCGACTGGCGCGGCGAGCAACTGGCGGTGCCGCGCGAGCAGTTGCT GGCCGCGCTCGAGACTGGCCGCGTGCTGTATTTCCCGAAGCTGCGCTTCGCGATCGACGGCGGCGAGCAAGCGCTGCTCG ATCCGGCACTGGCCGACCCGAAGCGCAAGAACATCAGCCTCGCCCCCGACGGCAGCGCGGTGGCCGGCGTGCAGGGCGAC GCGGTCACGCAGTCGGCCGTGCGCGCGCTGGTGGCGCGCTTCAAGCAGCAGGCCGGCACGCTGGTGGACGGCCTTTTCCC CGAGTATCGCGGCAAGCTGCGCATGGCACCGACCAGCCTGCGCCTGTGCCAGGTCGAGACGCGCGCCACCTCGTGGCGCA AGGACGACAGCCGGCTGCACGTGGATGCGTTTCCGTCGCGGCCGAACTATGGCGAGCGGATCCTGCGCGTGTTCGCCAAC GTCAACCCGGCCGGCGTGCCGCGCGTGTGGCGCGTGGGCGAGCCGTTCGAGGATGTCGCCAGACGCTTCCTGCCCGGTAT CCGCCCGCAGTGGCCGGGGTCGGCCCGGCTGCTCGAGCTGCTGCACGTGACCAAGTCGCGGCGCAGCGCCTACGACCACC TGATGCTGCGTCTGCACGACGCGATGAAGGCCGACCTCGACTATCAGCGCACCAGCCCGCAGCAGACCATGCCGTTCCCG TCCGGCTGCGTCTGGATCTGTTTCTCGGACCAAACCTCGCACGCGGTGATGTCGGGCCAGTTCATGATGGAGCAGACCTT CTTCCTGCCTGTCGAGGCGATGGTGCGGCCCGAATGCGCGCCGCTCGGCATCCTCGAACGCCTGCAGCAGCGCGCGCTCG TCTGA
Upstream 100 bases:
>100_bases TCGCCGAACGTCGTCAATCTCGGTACGGCCGGCGCGCCGCCCTCGCTGTCCCAGGTGAAGGGCGCGCTCGCGTCGTTCGG TCTCCTGTAACAATGGGCTC
Downstream 100 bases:
>100_bases GCGCGGCAAACCGAATGGAAATCACGATGATGATGGCGTCATGTTGAGAGCGGTGTATCGCGCGCTTTGGTGGATCGTCG CGCCCGCTGCGGTAGTGCGC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 294; Mature: 293
Protein sequence:
>294_residues MSESQILEIASADWRGEQLAVPREQLLAALETGRVLYFPKLRFAIDGGEQALLDPALADPKRKNISLAPDGSAVAGVQGD AVTQSAVRALVARFKQQAGTLVDGLFPEYRGKLRMAPTSLRLCQVETRATSWRKDDSRLHVDAFPSRPNYGERILRVFAN VNPAGVPRVWRVGEPFEDVARRFLPGIRPQWPGSARLLELLHVTKSRRSAYDHLMLRLHDAMKADLDYQRTSPQQTMPFP SGCVWICFSDQTSHAVMSGQFMMEQTFFLPVEAMVRPECAPLGILERLQQRALV
Sequences:
>Translated_294_residues MSESQILEIASADWRGEQLAVPREQLLAALETGRVLYFPKLRFAIDGGEQALLDPALADPKRKNISLAPDGSAVAGVQGD AVTQSAVRALVARFKQQAGTLVDGLFPEYRGKLRMAPTSLRLCQVETRATSWRKDDSRLHVDAFPSRPNYGERILRVFAN VNPAGVPRVWRVGEPFEDVARRFLPGIRPQWPGSARLLELLHVTKSRRSAYDHLMLRLHDAMKADLDYQRTSPQQTMPFP SGCVWICFSDQTSHAVMSGQFMMEQTFFLPVEAMVRPECAPLGILERLQQRALV >Mature_293_residues SESQILEIASADWRGEQLAVPREQLLAALETGRVLYFPKLRFAIDGGEQALLDPALADPKRKNISLAPDGSAVAGVQGDA VTQSAVRALVARFKQQAGTLVDGLFPEYRGKLRMAPTSLRLCQVETRATSWRKDDSRLHVDAFPSRPNYGERILRVFANV NPAGVPRVWRVGEPFEDVARRFLPGIRPQWPGSARLLELLHVTKSRRSAYDHLMLRLHDAMKADLDYQRTSPQQTMPFPS GCVWICFSDQTSHAVMSGQFMMEQTFFLPVEAMVRPECAPLGILERLQQRALV
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32952; Mature: 32821
Theoretical pI: Translated: 9.23; Mature: 9.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSESQILEIASADWRGEQLAVPREQLLAALETGRVLYFPKLRFAIDGGEQALLDPALADP CCHHHEEEHHCCCCCCCEECCCHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHCCHHCCC KRKNISLAPDGSAVAGVQGDAVTQSAVRALVARFKQQAGTLVDGLFPEYRGKLRMAPTSL CCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLCQVETRATSWRKDDSRLHVDAFPSRPNYGERILRVFANVNPAGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH RRFLPGIRPQWPGSARLLELLHVTKSRRSAYDHLMLRLHDAMKADLDYQRTSPQQTMPFP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGCVWICFSDQTSHAVMSGQFMMEQTFFLPVEAMVRPECAPLGILERLQQRALV CCEEEEEECCCCCCHHHHCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure SESQILEIASADWRGEQLAVPREQLLAALETGRVLYFPKLRFAIDGGEQALLDPALADP CHHHEEEHHCCCCCCCEECCCHHHHHHHHHCCCEEEEEEEEEEECCCCHHHHCCHHCCC KRKNISLAPDGSAVAGVQGDAVTQSAVRALVARFKQQAGTLVDGLFPEYRGKLRMAPTSL CCCCEEECCCCCEEECCCCCHHHHHHHHHHHHHHHHHHCHHHHHCCHHHCCCEEECCCCE RLCQVETRATSWRKDDSRLHVDAFPSRPNYGERILRVFANVNPAGVPRVWRVGEPFEDVA EEEEEHHHHCCCCCCCCEEEEEECCCCCCHHHHHHHHHHCCCCCCCCCEEECCCCHHHHH RRFLPGIRPQWPGSARLLELLHVTKSRRSAYDHLMLRLHDAMKADLDYQRTSPQQTMPFP HHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCC SGCVWICFSDQTSHAVMSGQFMMEQTFFLPVEAMVRPECAPLGILERLQQRALV CCEEEEEECCCCCCHHHHCHHHHHHHHHCCHHHHHCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA