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The map label for this gene is rfaC [H]

Identifier: 238026414

GI number: 238026414

Start: 813643

End: 814638

Strand: Direct

Name: rfaC [H]

Synonym: bglu_1g07490

Alternate gene names: 238026414

Gene position: 813643-814638 (Clockwise)

Preceding gene: 238026413

Following gene: 238026415

Centisome position: 20.83

GC content: 70.78

Gene sequence:

>996_bases
GTGCAAAAAATTCTGATCGTGCGCGTGTCGTCGCTCGGCGACGTCGTCCACAACATGCCGGTCATCGCCGACATTCGCCG
GCGCTATCCGGACGCGCAGATCGACTGGCTGGTCGAGGAAGGCTTCGTCGATCTGGTCAAGCTCGTGCGCGGCGTGCGCG
AGGTGCTGCCGTTCTCGCTGCGGCGCTGGCGCAAGTCGCTCGGCAGCGTGCGCACCTGGCGCGAGATCGCCGCGTTCCGC
CGGCGCATCGCGAAAGAGCACTACGACCTCGTGATCGACTGCCAGGGGCTGATCAAGAGCGCGTGGGTGGCGAGCTGGGC
GCGCGGGCCGCTCGTCGGGCTCGGCAACCGCACCGACGGCGCCGGCTACGAGTGGCCGGTGCGCTTCTTCTACCGCCGCC
GCGTGCCGATCGCGCCGCGCACGCATGTGGTCGAGCGCACGCGCGAGCTGGTGGCCGCGGCGCTCGGCGTCCCGCCGCCG
GCGCCCACCGACGATCTCGATTTCGGTCTTGATACGCATCAGGCGGCGCGTGCGCTCGCCTCGTTGCAGCTCAATCTTCC
AGTACCCTACGTCGTGTTCGTTCATGCGACTTCGCGCGCCGACAAGCAGTGGCCCGACGCCGCCTGGATCGAGCTCGGCC
AGGCGCTCGTGCGGCGCGGCGCGTCGCTGGTGCTGCCGTGGGGCAGCGACGCGGAGCGCGCCACGAGCGAACGGCTCGCG
AAGGAGTTCGGCGCGGCCGCGATCGTGCCGCCGAAGCTGTCGCTGCCGGCCGTGGTCGGGCTGATCGACGGCGCGGCGGC
CACCGTCGGCGTCGATACGGGGCTCGTCCACATCGCGGCGGCGCTCAAGCGGCCCACCGTCGAACTGTACAATTTCGCGA
CCGCCTGGCGCACGGGGGGCTACTGGTCGCCGAACGTCGTCAATCTCGGTACGGCCGGCGCGCCGCCCTCGCTGTCCCAG
GTGAAGGGCGCGCTCGCGTCGTTCGGTCTCCTGTAA

Upstream 100 bases:

>100_bases
GCCGTGTCCCGCCTGCCCGGGACAAAATCCGGGACAAAGCCGGCCGACGCGATAAAATCGCGTCTTTCGGTCCGTACCGG
CCTCTCGCCGTTTCTTCAGT

Downstream 100 bases:

>100_bases
CAATGGGCTCATGAGCGAATCCCAGATCCTCGAAATCGCATCGGCCGACTGGCGCGGCGAGCAACTGGCGGTGCCGCGCG
AGCAGTTGCTGGCCGCGCTC

Product: lipopolysaccharide heptosyltransferase I

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 331; Mature: 331

Protein sequence:

>331_residues
MQKILIVRVSSLGDVVHNMPVIADIRRRYPDAQIDWLVEEGFVDLVKLVRGVREVLPFSLRRWRKSLGSVRTWREIAAFR
RRIAKEHYDLVIDCQGLIKSAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRRRVPIAPRTHVVERTRELVAAALGVPPP
APTDDLDFGLDTHQAARALASLQLNLPVPYVVFVHATSRADKQWPDAAWIELGQALVRRGASLVLPWGSDAERATSERLA
KEFGAAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATAWRTGGYWSPNVVNLGTAGAPPSLSQ
VKGALASFGLL

Sequences:

>Translated_331_residues
MQKILIVRVSSLGDVVHNMPVIADIRRRYPDAQIDWLVEEGFVDLVKLVRGVREVLPFSLRRWRKSLGSVRTWREIAAFR
RRIAKEHYDLVIDCQGLIKSAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRRRVPIAPRTHVVERTRELVAAALGVPPP
APTDDLDFGLDTHQAARALASLQLNLPVPYVVFVHATSRADKQWPDAAWIELGQALVRRGASLVLPWGSDAERATSERLA
KEFGAAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATAWRTGGYWSPNVVNLGTAGAPPSLSQ
VKGALASFGLL
>Mature_331_residues
MQKILIVRVSSLGDVVHNMPVIADIRRRYPDAQIDWLVEEGFVDLVKLVRGVREVLPFSLRRWRKSLGSVRTWREIAAFR
RRIAKEHYDLVIDCQGLIKSAWVASWARGPLVGLGNRTDGAGYEWPVRFFYRRRVPIAPRTHVVERTRELVAAALGVPPP
APTDDLDFGLDTHQAARALASLQLNLPVPYVVFVHATSRADKQWPDAAWIELGQALVRRGASLVLPWGSDAERATSERLA
KEFGAAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATAWRTGGYWSPNVVNLGTAGAPPSLSQ
VKGALASFGLL

Specific function: Heptose transfer to the lipopolysaccharide core. It transfers the innnermost heptose to [4'-P](3-deoxy-D-manno- octulosonic acid)2-IVA [H]

COG id: COG0859

COG function: function code M; ADP-heptose:LPS heptosyltransferase

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the glycosyltransferase 9 family [H]

Homologues:

Organism=Escherichia coli, GI1790051, Length=332, Percent_Identity=37.6506024096386, Blast_Score=198, Evalue=5e-52,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002201
- InterPro:   IPR011908 [H]

Pfam domain/function: PF01075 Glyco_transf_9 [H]

EC number: 2.-.-.- [C]

Molecular weight: Translated: 36235; Mature: 36235

Theoretical pI: Translated: 10.54; Mature: 10.54

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
0.6 %Met     (Translated Protein)
0.9 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
0.6 %Met     (Mature Protein)
0.9 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MQKILIVRVSSLGDVVHNMPVIADIRRRYPDAQIDWLVEEGFVDLVKLVRGVREVLPFSL
CCCEEEEEEHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWRKSLGSVRTWREIAAFRRRIAKEHYDLVIDCQGLIKSAWVASWARGPLVGLGNRTDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEECCCCCCC
AGYEWPVRFFYRRRVPIAPRTHVVERTRELVAAALGVPPPAPTDDLDFGLDTHQAARALA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
SLQLNLPVPYVVFVHATSRADKQWPDAAWIELGQALVRRGASLVLPWGSDAERATSERLA
HHEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
KEFGAAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATAWRTGG
HHHCCCEECCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
YWSPNVVNLGTAGAPPSLSQVKGALASFGLL
CCCCCEEECCCCCCCCCHHHHHHHHHHHCCC
>Mature Secondary Structure
MQKILIVRVSSLGDVVHNMPVIADIRRRYPDAQIDWLVEEGFVDLVKLVRGVREVLPFSL
CCCEEEEEEHHHHHHHHCCCHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHH
RRWRKSLGSVRTWREIAAFRRRIAKEHYDLVIDCQGLIKSAWVASWARGPLVGLGNRTDG
HHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEHHHHHHHHHHHHHCCCCEEECCCCCCC
AGYEWPVRFFYRRRVPIAPRTHVVERTRELVAAALGVPPPAPTDDLDFGLDTHQAARALA
CCCCHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
SLQLNLPVPYVVFVHATSRADKQWPDAAWIELGQALVRRGASLVLPWGSDAERATSERLA
HHEECCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHCCCEEEEECCCCHHHHHHHHHH
KEFGAAAIVPPKLSLPAVVGLIDGAAATVGVDTGLVHIAAALKRPTVELYNFATAWRTGG
HHHCCCEECCCCCCHHHHHHHHCCCHHHHCCHHHHHHHHHHHCCCCHHHHHHHHHHCCCC
YWSPNVVNLGTAGAPPSLSQVKGALASFGLL
CCCCCEEECCCCCCCCCHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Transferases; Glycosyltransferases [C]

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1527014; 11677609; 1657881 [H]