Definition Burkholderia glumae BGR1 chromosome chromosome 1, complete sequence.
Accession NC_012724
Length 3,906,507

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The map label for this gene is ucpA [C]

Identifier: 238026329

GI number: 238026329

Start: 713227

End: 714018

Strand: Direct

Name: ucpA [C]

Synonym: bglu_1g06630

Alternate gene names: 238026329

Gene position: 713227-714018 (Clockwise)

Preceding gene: 238026328

Following gene: 238026330

Centisome position: 18.26

GC content: 75.25

Gene sequence:

>792_bases
ATGGCTGAGCCGAGCGCCCGCCACGTGGTGATCAGCGGCGCGAGCGCCGGGCTGGGGCGCGCGCTCGCGCTCGCCTACGC
CCGGCCCGGCGTCACGCTCGGCCTGATCGGGCGCGACCGCGAACGCATCGAGGCCGCCGCCGCCGCCTGTCGCGCGCGCG
GCGCCGAGGTGCAGACGGGGGTGCTGGACGTGCGCGAGGCGGCCGCGACCGCTGCCTGGCTCGACGCGTTCGACGCGCGC
CATCCGATCGGGCTGCTGATCGCGAATGCCGGCGTGGCCAGCACGATCGGCTCGGCGGACGACTGGGAAGGGCTCGAGCG
CACCGCGCGGGTGGTCGACACCAACTTCTACGGCGCGCTCCACACCGTGCTGCCGGTGCTCGAGCGCATGCGCGCGCGCC
GCGCCGGCCGGGTGGTGCTGGTCAGTTCGCTGGCCGCGCTGCGCGGCATGGCGATCTCGCCCGCCTACTGCGCGAGCAAG
GCGGCGATCAAGGCCTGGGGCGATTCGGTGCGGCCGCTGCTGGCGCGCGACGGGGTGCGCGTGACGGTGGTGCTGCCCGG
CTTCGTGAAGACCGCGATGAGCGACGTGTTTCCCGGCGACAAACCGTTCCTGTGGAGCGCCGAGCGCGCCGCCGCCCATA
TCCGCCGCGGTCTGGACGCGGGCCGCAGCGAGATCGCCTTCCCGGCGCTGCTCGCGTTCGGCATGCGCCTGCTGCCGCTG
CTGCCGGCCGCGCTGGCCGACGCGATCCTGGGCCGCCTGTCGTACCTGCCTGCCGAGGACGCGGCCAATTGA

Upstream 100 bases:

>100_bases
GACTACGTGATGCACCACACCCAGATCAACGGCGATTTCTACACGCGCACCGGCATCGCGATGGCGGTGGCGGGCGCGGC
CGACCGCCTGGAGCGCGCCG

Downstream 100 bases:

>100_bases
GCCTGCTGCCCGGTCTCATGTTCGCGCTCACCGCGGCGCCGTCGTTCGCGCTCGAGCGCATCGCGCTGCCGCGCGGGCCG
TGGCGCCGGCCGTGGCGGTC

Product: short-chain dehydrogenase/reductase family oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 263; Mature: 262

Protein sequence:

>263_residues
MAEPSARHVVISGASAGLGRALALAYARPGVTLGLIGRDRERIEAAAAACRARGAEVQTGVLDVREAAATAAWLDAFDAR
HPIGLLIANAGVASTIGSADDWEGLERTARVVDTNFYGALHTVLPVLERMRARRAGRVVLVSSLAALRGMAISPAYCASK
AAIKAWGDSVRPLLARDGVRVTVVLPGFVKTAMSDVFPGDKPFLWSAERAAAHIRRGLDAGRSEIAFPALLAFGMRLLPL
LPAALADAILGRLSYLPAEDAAN

Sequences:

>Translated_263_residues
MAEPSARHVVISGASAGLGRALALAYARPGVTLGLIGRDRERIEAAAAACRARGAEVQTGVLDVREAAATAAWLDAFDAR
HPIGLLIANAGVASTIGSADDWEGLERTARVVDTNFYGALHTVLPVLERMRARRAGRVVLVSSLAALRGMAISPAYCASK
AAIKAWGDSVRPLLARDGVRVTVVLPGFVKTAMSDVFPGDKPFLWSAERAAAHIRRGLDAGRSEIAFPALLAFGMRLLPL
LPAALADAILGRLSYLPAEDAAN
>Mature_262_residues
AEPSARHVVISGASAGLGRALALAYARPGVTLGLIGRDRERIEAAAAACRARGAEVQTGVLDVREAAATAAWLDAFDARH
PIGLLIANAGVASTIGSADDWEGLERTARVVDTNFYGALHTVLPVLERMRARRAGRVVLVSSLAALRGMAISPAYCASKA
AIKAWGDSVRPLLARDGVRVTVVLPGFVKTAMSDVFPGDKPFLWSAERAAAHIRRGLDAGRSEIAFPALLAFGMRLLPLL
PAALADAILGRLSYLPAEDAAN

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the short-chain dehydrogenases/reductases (SDR) family [H]

Homologues:

Organism=Homo sapiens, GI7657478, Length=214, Percent_Identity=33.1775700934579, Blast_Score=82, Evalue=4e-16,
Organism=Homo sapiens, GI40807363, Length=262, Percent_Identity=30.5343511450382, Blast_Score=82, Evalue=5e-16,
Organism=Homo sapiens, GI20149619, Length=193, Percent_Identity=28.4974093264249, Blast_Score=78, Evalue=9e-15,
Organism=Homo sapiens, GI4503817, Length=185, Percent_Identity=27.5675675675676, Blast_Score=73, Evalue=2e-13,
Organism=Homo sapiens, GI7706318, Length=194, Percent_Identity=28.3505154639175, Blast_Score=70, Evalue=1e-12,
Organism=Homo sapiens, GI22507405, Length=192, Percent_Identity=30.7291666666667, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI19743808, Length=222, Percent_Identity=26.1261261261261, Blast_Score=70, Evalue=2e-12,
Organism=Homo sapiens, GI142976729, Length=261, Percent_Identity=27.5862068965517, Blast_Score=69, Evalue=3e-12,
Organism=Homo sapiens, GI5031737, Length=227, Percent_Identity=28.1938325991189, Blast_Score=68, Evalue=8e-12,
Organism=Homo sapiens, GI40548397, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI214010158, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI214010156, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI22758144, Length=191, Percent_Identity=26.7015706806283, Blast_Score=66, Evalue=3e-11,
Organism=Homo sapiens, GI40254992, Length=190, Percent_Identity=28.4210526315789, Blast_Score=65, Evalue=5e-11,
Organism=Homo sapiens, GI150247226, Length=222, Percent_Identity=27.9279279279279, Blast_Score=65, Evalue=7e-11,
Organism=Homo sapiens, GI50726952, Length=194, Percent_Identity=29.3814432989691, Blast_Score=65, Evalue=7e-11,
Organism=Escherichia coli, GI87082100, Length=199, Percent_Identity=33.6683417085427, Blast_Score=80, Evalue=1e-16,
Organism=Escherichia coli, GI1787820, Length=200, Percent_Identity=30.5, Blast_Score=69, Evalue=4e-13,
Organism=Escherichia coli, GI2367175, Length=197, Percent_Identity=29.4416243654822, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI1786701, Length=270, Percent_Identity=27.7777777777778, Blast_Score=64, Evalue=1e-11,
Organism=Escherichia coli, GI1790717, Length=212, Percent_Identity=24.5283018867925, Blast_Score=61, Evalue=6e-11,
Organism=Caenorhabditis elegans, GI17565030, Length=228, Percent_Identity=29.8245614035088, Blast_Score=77, Evalue=7e-15,
Organism=Caenorhabditis elegans, GI17563726, Length=196, Percent_Identity=28.0612244897959, Blast_Score=75, Evalue=2e-14,
Organism=Caenorhabditis elegans, GI17567345, Length=193, Percent_Identity=26.4248704663212, Blast_Score=75, Evalue=3e-14,
Organism=Caenorhabditis elegans, GI17560150, Length=198, Percent_Identity=28.2828282828283, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538486, Length=210, Percent_Identity=31.4285714285714, Blast_Score=74, Evalue=8e-14,
Organism=Caenorhabditis elegans, GI17538480, Length=206, Percent_Identity=29.126213592233, Blast_Score=73, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI17562990, Length=198, Percent_Identity=27.7777777777778, Blast_Score=72, Evalue=2e-13,
Organism=Caenorhabditis elegans, GI72000259, Length=202, Percent_Identity=29.7029702970297, Blast_Score=71, Evalue=7e-13,
Organism=Caenorhabditis elegans, GI17551412, Length=199, Percent_Identity=27.1356783919598, Blast_Score=67, Evalue=7e-12,
Organism=Caenorhabditis elegans, GI25152911, Length=254, Percent_Identity=26.7716535433071, Blast_Score=67, Evalue=8e-12,
Organism=Caenorhabditis elegans, GI17560220, Length=208, Percent_Identity=26.9230769230769, Blast_Score=66, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI193210355, Length=203, Percent_Identity=25.615763546798, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI17507613, Length=196, Percent_Identity=29.0816326530612, Blast_Score=65, Evalue=4e-11,
Organism=Caenorhabditis elegans, GI32563809, Length=198, Percent_Identity=28.7878787878788, Blast_Score=65, Evalue=4e-11,
Organism=Saccharomyces cerevisiae, GI6323882, Length=197, Percent_Identity=31.4720812182741, Blast_Score=80, Evalue=4e-16,
Organism=Drosophila melanogaster, GI24644339, Length=189, Percent_Identity=31.7460317460317, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI23397609, Length=194, Percent_Identity=36.5979381443299, Blast_Score=79, Evalue=3e-15,
Organism=Drosophila melanogaster, GI281364892, Length=251, Percent_Identity=27.0916334661355, Blast_Score=75, Evalue=4e-14,
Organism=Drosophila melanogaster, GI21357041, Length=191, Percent_Identity=31.413612565445, Blast_Score=73, Evalue=2e-13,
Organism=Drosophila melanogaster, GI24649181, Length=257, Percent_Identity=25.2918287937743, Blast_Score=72, Evalue=3e-13,
Organism=Drosophila melanogaster, GI28571526, Length=197, Percent_Identity=31.4720812182741, Blast_Score=69, Evalue=3e-12,
Organism=Drosophila melanogaster, GI24584752, Length=187, Percent_Identity=28.3422459893048, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21358495, Length=191, Percent_Identity=27.7486910994764, Blast_Score=69, Evalue=5e-12,
Organism=Drosophila melanogaster, GI21356301, Length=186, Percent_Identity=29.0322580645161, Blast_Score=68, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR002198
- InterPro:   IPR002347
- InterPro:   IPR016040
- InterPro:   IPR020904 [H]

Pfam domain/function: PF00106 adh_short [H]

EC number: 1.-.-.- [C]

Molecular weight: Translated: 27536; Mature: 27405

Theoretical pI: Translated: 10.18; Mature: 10.18

Prosite motif: PS00061 ADH_SHORT

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
2.7 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
1.5 %Met     (Mature Protein)
2.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAEPSARHVVISGASAGLGRALALAYARPGVTLGLIGRDRERIEAAAAACRARGAEVQTG
CCCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHH
VLDVREAAATAAWLDAFDARHPIGLLIANAGVASTIGSADDWEGLERTARVVDTNFYGAL
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
HTVLPVLERMRARRAGRVVLVSSLAALRGMAISPAYCASKAAIKAWGDSVRPLLARDGVR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCE
VTVVLPGFVKTAMSDVFPGDKPFLWSAERAAAHIRRGLDAGRSEIAFPALLAFGMRLLPL
EEEEECHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LPAALADAILGRLSYLPAEDAAN
HHHHHHHHHHHHHHCCCCCCCCC
>Mature Secondary Structure 
AEPSARHVVISGASAGLGRALALAYARPGVTLGLIGRDRERIEAAAAACRARGAEVQTG
CCCCCCEEEEECCCCCHHHHHHHHHCCCCCEEEECCCCHHHHHHHHHHHHHCCCCHHHH
VLDVREAAATAAWLDAFDARHPIGLLIANAGVASTIGSADDWEGLERTARVVDTNFYGAL
HHHHHHHHHHHHHHHHHCCCCCCEEEEECCCHHHHCCCCCCHHHHHHHHHHHCCCHHHHH
HTVLPVLERMRARRAGRVVLVSSLAALRGMAISPAYCASKAAIKAWGDSVRPLLARDGVR
HHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCHHHHHHHHHHHHHCCCCCHHHHCCCCE
VTVVLPGFVKTAMSDVFPGDKPFLWSAERAAAHIRRGLDAGRSEIAFPALLAFGMRLLPL
EEEEECHHHHHHHHHCCCCCCCCEECHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHH
LPAALADAILGRLSYLPAEDAAN
HHHHHHHHHHHHHHCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 1730672 [H]